BAC Information

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BAC

Clone NameB6Ng01-130E04
Chromosome2 (Build37)
Map Location 73,217,140 - 73,390,837
singlet/doubletdoublet
Overlap geneGpr155, Wipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172, Lnp
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130E04.bB6Ng01-130E04.g
ACCDH931621DH931622
length1,042965
definitionDH931621|Mus musculus domesticus DNA, BAC clone: B6Ng01-130E04, 5' end.DH931622|Mus musculus domesticus DNA, BAC clone: B6Ng01-130E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,389,803 - 73,390,837)(73,217,140 - 73,218,116)
sequence
gaattcagccgtgaatcgggaaaatggtctttcacagtaagtctattcag
atttcattttcagttatgtaagattacagagctctctgctcaccttagcg
actcttcttcccactttaaatcaactgtatactgccatttctttatatga
ggcaatttaagataacagaaatcatacctatgaaaatagtgtatagggct
ggagagatggctcagtggttaagagtactgactgctcttccaaaggtcct
gagttcaaatctcagcaaccacatggtagctcacaaccatctgtaatgag
atctgatgtcttcttctggagtgtctgaagacagctacagtatacttaca
tataataataaataaatctcgaggccagagcaagcagaggtcctgagttc
aattcccagcaactacatgatggtcataagcatctgtacagctacagcat
actcatataaataaataaataaataaataaataaataaatagatagatag
atagatagatcttttaaaaaagaaagaaaatcgtgtataaattcaacttt
agtaattcaagattttttgtttgtttatttgtttgttttatgatgatgct
agatttcaaactctcatgcaagcaagttggggcaaatgctctaccaccga
gctgaatcccccctcaggttttgccttgtttgaatacacattactaggga
gtttgcgctgaaaaacaaacaaacaaacaaacaaacaacttctgtagtat
atccttttagtaaagcaagaaaacctttaaaatctcataactacttgcat
agtcccccaagggtctactcagtgagcgtgagtcaaggttcacttgattt
tgggttcttcattatttaattctttctgagtttgtgctacatttgaggct
tagacttcctgcaacatcttcatcctaaactttggactcttcagaaaagt
taacgtggctcttaattccagcccccatatgcatggggtgtcatgattaa
ccagctttattcttttttcttttggatttatctaatttataa
gaattcctaggagaggttgtaaagcaaagcaaaagaaaggtctctcttct
ctactcaccatgaacagaggggaaggcagatggacacagacgctattaac
aaatgccccattagggagcagacatttagaataatgttctgtagcacatc
ttccatttcacaggcagatgagaaagctgcctatatgactggcttttaat
aaagcgatgctccacagcctggtgttacaagagttcttacccatgagtgc
caccaacagcaaaacttctcatcccaaattgaccaacacactcatcacgg
caattaaggttgctatgctgctaggaacctgatcattaccaatttactga
cagaacgtagactgtaagaaaagctgggataaaaatagcttggcatatat
atttgatttgaaaagtgtcttaatagagaaagtaatttatccagtagctt
ttttccacttctgttctttccccccctttatggactcactcatctgtggg
tgcatccagaggctagaggaggatgtgtgagcctacaaagagacaggtct
ctcactgaacctgaagcctgtgtcagttaggctgactggctagtgagctc
cggggccttcctctccccaaccccccagcactagggttctaggtaggaaa
ggcctgcctttttttttttcccctcaagctggtaaagaaaggcttttatt
atgggcaaagcaacacacacagaaagcaagcacacagagtacaaggcctt
tcacacagcagaggagggcttcagaaagctaacgccctcgtgcctggcct
gtatgggggtgctggaagttcaatcgaggtcctctgcttttgcagcatca
tctcactaagctaccaccctaccccctcctggacatggctttaggacaaa
agcatcggatccatctgaaactgctaaattacaaggtggtgggtctttaa
gataggctaccctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73389803_73390837
seq2: B6Ng01-130E04.b_45_1086 (reverse)

seq1  TAATAAA-TAAATAAATCAAAAAGAAAAAAGAAAAAAGCTGTGTTATCAA  49
      | ||||| || ||||||| |||||||||||||| |||||||  | |||| 
seq2  TTATAAATTAGATAAATCCAAAAGAAAAAAGAATAAAGCTGGTTAATCAT  50

seq1  GACACCCCATGAGTATGGGGGGCTGGAA-TAAGAGCCACTTTAACTTTTC  98
      |||||||||||  ||| ||||||||||| |||||||||| ||||||||||
seq2  GACACCCCATGCATAT-GGGGGCTGGAATTAAGAGCCACGTTAACTTTTC  99

seq1  TTGAGAGT-CAAAGTTTA-GCTG-AGATGTTG-ATGGAGTCTAAGCCTCA  144
      |  ||||| ||||||||| | || |||||||| | | |||||||||||||
seq2  TGAAGAGTCCAAAGTTTAGGATGAAGATGTTGCAGGAAGTCTAAGCCTCA  149

seq1  AATGTAGCAC-AACTCAGAAAGAA-TAAATAATGAAGAACCCAAATTCAA  192
      |||||||||| ||||||||||||| |||||||||||||||||||| ||||
seq2  AATGTAGCACAAACTCAGAAAGAATTAAATAATGAAGAACCCAAAATCAA  199

seq1  GTGAACCTTGACTCACGCTCACCTGAGTAGACCCTTGGGGGACTATGCAA  242
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTGAACCTTGACTCACGCTCA-CTGAGTAGACCCTTGGGGGACTATGCAA  248

seq1  GTAGTTATGAGATTTTAAAGGTTTTCTTGCTTTACT-AAAGGATATACTA  291
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAGTTATGAGATTTTAAAGGTTTTCTTGCTTTACTAAAAGGATATACTA  298

seq1  CAGAAGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAGCGCAAACTCCCT  341
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAG-TTGTTTGTTTGTTTGTTTGTTTGTTTTTCAGCGCAAACTCCCT  347

seq1  AGTAATGTGTATTCAAACAAGGCAAAACCTGAGGGGGGATTCAGCTCGGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTGTATTCAAACAAGGCAAAACCTGAGGGGGGATTCAGCTCGGT  397

seq1  GGTAGAGCATTTG-CCCAACTTGCTTGCATGAGAGTTTGAAATCTAGCAT  440
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGCATTTGCCCCAACTTGCTTGCATGAGAGTTTGAAATCTAGCAT  447

seq1  CATCATAAAACAAACAAATAAACAAACAAAAAATCTTGAATTACTAAAGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAAACAAACAAATAAACAAACAAAAAATCTTGAATTACTAAAGT  497

seq1  TGAATTTATACACGATTTTCTTTCTTTTTTAAAAGATCTATCTATCTATC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTATACACGATTTTCTTTCTTTTTTAAAAGATCTATCTATCTATC  547

seq1  TATCTATTTATTTATTTATTTATTTATTTATTTATTTATATGAGTATGCT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTTATTTATTTATTTATTTATTTATTTATTTATATGAGTATGCT  597

seq1  GTAGCTGTACAGATGCTTATGACCATCATGTAGTTGCTGGGAATTGAACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTACAGATGCTTATGACCATCATGTAGTTGCTGGGAATTGAACT  647

seq1  CAGGACCTCTGCTTGCTCTGGCCTCGAGATTTATTTATTATTATATGTAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTCTGCTTGCTCTGGCCTCGAGATTTATTTATTATTATATGTAA  697

seq1  GTATACTGTAGCTGTCTTCAGACACTCCAGAAGAAGACATCAGATCTCAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTGTAGCTGTCTTCAGACACTCCAGAAGAAGACATCAGATCTCAT  747

seq1  TACAGATGGTTGTGAGCTACCATGTGGTTGCTGAGATTTGAACTCAGGAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGGTTGTGAGCTACCATGTGGTTGCTGAGATTTGAACTCAGGAC  797

seq1  CTTTGGAAGAGCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGAGCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCC  847

seq1  TATACACTATTTTCATAGGTATGATTTCTGTTATCTTAAATTGCCTCATA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTATTTTCATAGGTATGATTTCTGTTATCTTAAATTGCCTCATA  897

seq1  TAAAGAAATGGCAGTATACAGTTGATTTAAAGTGGGAAGAAGAGTCGCTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATGGCAGTATACAGTTGATTTAAAGTGGGAAGAAGAGTCGCTA  947

seq1  AGGTGAGCAGAGAGCTCTGTAATCTTACATAACTGAAAATGAAATCTGAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGCAGAGAGCTCTGTAATCTTACATAACTGAAAATGAAATCTGAA  997

seq1  TAGACTTACTGTGAAAGACCATTTTCCCGATTCACGGCTGAATTC  1035
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTACTGTGAAAGACCATTTTCCCGATTCACGGCTGAATTC  1042

seq1: chr2_73217140_73218116
seq2: B6Ng01-130E04.g_68_1032

seq1  GAATTCCTAGGAGAGGTTGTAAAGCAAAGCAAAAGAAAGGTCTCTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGAGAGGTTGTAAAGCAAAGCAAAAGAAAGGTCTCTCTTCT  50

seq1  CTACTCACCATGAACAGAGGGGAAGGCAGATGGACACAGACGCTATTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCACCATGAACAGAGGGGAAGGCAGATGGACACAGACGCTATTAAC  100

seq1  AAATGCCCCATTAGGGAGCAGACATTTAGAATAATGTTCTGTAGCACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCCATTAGGGAGCAGACATTTAGAATAATGTTCTGTAGCACATC  150

seq1  TTCCATTTCACAGGCAGATGAGAAAGCTGCCTATATGACTGGCTTTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCACAGGCAGATGAGAAAGCTGCCTATATGACTGGCTTTTAAT  200

seq1  AAAGCGATGCTCCACAGCCTGGTGTTACAAGAGTTCTTACCCATGAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGATGCTCCACAGCCTGGTGTTACAAGAGTTCTTACCCATGAGTGC  250

seq1  CACCAACAGCAAAACTTCTCATCCCAAATTGACCAACACACTCATCACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACAGCAAAACTTCTCATCCCAAATTGACCAACACACTCATCACGG  300

seq1  CAATTAAGGTTGCTATGCTGCTAGGAACCTGATCATTACCAATTTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGGTTGCTATGCTGCTAGGAACCTGATCATTACCAATTTACTGA  350

seq1  CAGAACGTAGACTGTAAGAAAAGCTGGGATAAAAATAGCTTGGCATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACGTAGACTGTAAGAAAAGCTGGGATAAAAATAGCTTGGCATATAT  400

seq1  ATTTGATTTGAAAAGTGTCTTAATAGAGAAAGTAATTTATCCAGTAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTGAAAAGTGTCTTAATAGAGAAAGTAATTTATCCAGTAGCTT  450

seq1  TTTTCCACTTCTGTTCTTTCCCCCCCTTTATGGACTCACTCATCTGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACTTCTGTTCTTTCCCCCCCTTTATGGACTCACTCATCTGTGGG  500

seq1  TGCATCCAGAGGCTAGAGGAGGATGTGTGAGCCTACAAAGAGACAGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCAGAGGCTAGAGGAGGATGTGTGAGCCTACAAAGAGACAGGTCT  550

seq1  CTCACTGAACCTGAAGCCTGTGTCAGTTAGGCTGACTGGCTAGTGAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGAACCTGAAGCCTGTGTCAGTTAGGCTGACTGGCTAGTGAGCTC  600

seq1  CGGGGCCTTCCTCTCCCCAACCCCCCAGCACTAGGGTTCTAGGTAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCCTTCCTCTCCCCAACCCCCCAGCACTAGGGTTCTAGGTAGGAAA  650

seq1  GGCCTGCCTTTTTTTTTTTCCCCTCAAGCTGGTAAAGAAAGGCTTTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCCTTTTTTTTTTTCCCCTCAAGCTGGTAAAGAAAGGCTTTTATT  700

seq1  ATGGGCAAAGCAACACACACAGAAAGCAAGCACACAGAGTACAAGGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAAAGCAACACACACAGAAAGCAAGCACACAGAGTACAAGGCCTT  750

seq1  TCACACAGCAGAGGAGGGCTTCAGAAAGCTAACGCCCTCGTGCCTGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGCAGAGGAGGGCTTCAGAAAGCTAACGCCCTCGTGCCTGGCCT  800

seq1  GTATGTGGGTGCTGGAAGTTCAAATCGAGGTCCTCTTGCTTTTGCAGCAA  850
      ||||| ||||||||||||||| ||||||||||||| |||||||||||| |
seq2  GTATGGGGGTGCTGGAAGTTC-AATCGAGGTCCTC-TGCTTTTGCAGC-A  847

seq1  TCATTCTCACTAAGCTACCACCCTACCCCCTCCTGGACATGGCTTTAAGG  900
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCA-TCTCACTAAGCTACCACCCTACCCCCTCCTGGACATGGCTTT-AGG  895

seq1  ACAAAAGCATCGGATTCCATCTGAAACTGCTAAATTTACAAAGGTTGGTT  950
      |||||||||||||| ||||||||||||||||||| |||| |||||  | |
seq2  ACAAAAGCATCGGA-TCCATCTGAAACTGCTAAA-TTAC-AAGGT--GGT  940

seq1  GGGTCTTCTAAGATAGGCTTACCCTGT  977
      ||||||| |||||||||| ||||||||
seq2  GGGTCTT-TAAGATAGGC-TACCCTGT  965