BAC Information

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BAC

Clone NameB6Ng01-130F05
Chromosome2 (Build37)
Map Location 83,088,709 - 83,286,474
singlet/doubletdoublet
Overlap geneLOC545429, Ppia-ps2_981.1, LOC100040818
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
Downstream geneLOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130F05.bB6Ng01-130F05.g
ACCDH931671DH931672
length815932
definitionDH931671|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F05, 5' end.DH931672|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,088,709 - 83,089,411)(83,285,536 - 83,286,474)
sequence
gaattcactgcctaaatgtgtttctttctatccccacatgactgtcgctt
cataataaagtaatatctagagaaatccactccaaaaccaacccatatat
gtgaaatgaaaataataatgaaagccaattttctgaggaggcaccagact
gatttccagaacggttgtactagcctgcaatcagaatattgggcatagta
ttccctgaggacccagcaataccactcctgggcatatatccaaaagatgc
tccgacataaaacaagaacacatgctccactatgttcatagcagccatat
ttataataaccagaaactggaaagaactcagatgtccctcaacagagaaa
ttgatacagaaaatgtggtacatttacaaaacggagtactactcagctat
taaaaacaatgaattcatgaaattcgcagacaaattaatggaattagaaa
atatcatcctgagttaggtaacccaatcacaaaaaaacacacatggtatg
tactcactgatacgtagatattagggagaaaagtttagaatagccaagat
ataattcacagaccatatgaagctcaaggaagaccaaagtgatgcttcag
tcctacttagaagggggaacaaaataatcatgaaaggtagagggtgggag
aaacttgaggggaagaaaagaggaaaaggaggaaaggggacaggatcagg
agtgggaggagacagggtagatgtacagagggtcaggaaatttaatggag
gtgtgtagcaatgggggatggggaacaggggtagccaacataaatcccag
atgtcacgaaagcaa
gaattctctctgaaaggcttgtgggatgtttgaggccatttttctagaga
ctatgcccatggtcccaggcatacctgctgtgaaagtgttattcagtcac
atttggctcaggacctcatggcatagaacagatagcttcccagagtctct
gaagccaggtgattcagaaaatactcttctgttctgattggcacagataa
aaagtccaaacataaaaaaaaaaagccaatctaagtagcaaaaataacca
tagcaaatatatattaaatagaatttaaagtaatataagatcttacttaa
tgtaatttattataaacagtaaaaaaagatggctaggtaaaaataatttt
acagaaaagaggataacactttgcacaatgttttaaaattaaaatatagc
atttaacccaaactttatttaaaaagcctgaagctaaattaatttaccac
cttcatattaaatatttttaatcaggaagcaacattagtcctaaaaatat
tcctctaaaaccaaaccaaaccaaaccaaaccaaaccactaaaaccaaat
ttgggtcactgagttttaaactatatttcttattattaacatagttacat
atttttatctgtaagatcattaacatattttaagtccttcctctgtctct
ccatctcttaaaagcacactgtttttttatacttccttgaagtaattttc
ttttgctcagtttggtaaaatcttgaaagttcctttatctttggtacatg
taatgtattttggaaagctatgcttattttacataggaacaaaggcattt
tttttatatttttatttatatttttgaaaatttaagtactgcattattct
ttcaaaatgctgatacctatgaaccaaatttaaccagtggttcctaccac
aatagtcattgcaaggttaccttcaccttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83088709_83089411
seq2: B6Ng01-130F05.b_48_750

seq1  GAATTCACTGCCTAAATGTGTTTCTTTCTATCCCCACATGACTGTCGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCCTAAATGTGTTTCTTTCTATCCCCACATGACTGTCGCTT  50

seq1  CATAATAAAGTAATATCTAGAGAAATCCACTCCAAAACCAACCCATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAAAGTAATATCTAGAGAAATCCACTCCAAAACCAACCCATATAT  100

seq1  GTGAAATGAAAATAATAATGAAAGCCAATTTTCTGAGGAGGCACCAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGAAAATAATAATGAAAGCCAATTTTCTGAGGAGGCACCAGACT  150

seq1  GATTTCCAGAACGGTTGTACTAGCCTGCAATCAGAATATTGGGCATAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGAACGGTTGTACTAGCCTGCAATCAGAATATTGGGCATAGTA  200

seq1  TTCCCTGAGGACCCAGCAATACCACTCCTGGGCATATATCCAAAAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAGGACCCAGCAATACCACTCCTGGGCATATATCCAAAAGATGC  250

seq1  TCCGACATAAAACAAGAACACATGCTCCACTATGTTCATAGCAGCCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACATAAAACAAGAACACATGCTCCACTATGTTCATAGCAGCCATAT  300

seq1  TTATAATAACCAGAAACTGGAAAGAACTCAGATGTCCCTCAACAGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAACCAGAAACTGGAAAGAACTCAGATGTCCCTCAACAGAGAAA  350

seq1  TTGATACAGAAAATGTGGTACATTTACAAAACGGAGTACTACTCAGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACAGAAAATGTGGTACATTTACAAAACGGAGTACTACTCAGCTAT  400

seq1  TAAAAACAATGAATTCATGAAATTCGCAGACAAATTAATGGAATTAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAATGAATTCATGAAATTCGCAGACAAATTAATGGAATTAGAAA  450

seq1  ATATCATCCTGAGTTAGGTAACCCAATCACAAAAAAACACACATGGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCCTGAGTTAGGTAACCCAATCACAAAAAAACACACATGGTATG  500

seq1  TACTCACTGATACGTAGATATTAGGGAGAAAAGTTTAGAATAGCCAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTGATACGTAGATATTAGGGAGAAAAGTTTAGAATAGCCAAGAT  550

seq1  ATAATTCACAGACCATATGAAGCTCAAGGAAGACCAAAGTGATGCTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCACAGACCATATGAAGCTCAAGGAAGACCAAAGTGATGCTTCAG  600

seq1  TCCTACTTAGAAGGGGGAACAAAATAATCATGAAAGGTAGAGGGTGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTAGAAGGGGGAACAAAATAATCATGAAAGGTAGAGGGTGGGAG  650

seq1  AAACTTGAGGGGAAGAAAAGAGGAAAAGGAGGAAAGGGGACAGGATCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAGGGGAAGAAAAGAGGAAAAGGAGGAAAGGGGACAGGATCAGG  700

seq1  AGT  703
      |||
seq2  AGT  703

seq1: chr2_83285536_83286474
seq2: B6Ng01-130F05.g_69_1000 (reverse)

seq1  CATAAGTTGAAGGTAACCTTTGCATAGACTATTGTATGTAGGAAACCACT  50
      |||||| ||||||||||| |||||  |||||||||  ||||| |||||||
seq2  CATAAGGTGAAGGTAACC-TTGCAATGACTATTGT-GGTAGG-AACCACT  47

seq1  GGTTTAATCTGGTTCATAGTTATCAGCATTTTG-AAGTATAATTGCTAGT  99
      |||| ||| |||||||||| ||||||||||||| ||| |||| ||| |||
seq2  GGTTAAATTTGGTTCATAGGTATCAGCATTTTGAAAGAATAA-TGC-AGT  95

seq1  ACTTTATATTTTTCATATATATATATATATATATATATATATATG-CTTT  148
      ||||   | |||||| | ||||| ||| | ||||| | | | ||| ||||
seq2  ACTT--AAATTTTCAAAAATATAAATAAAAATATA-AAAAAAATGCCTTT  142

seq1  GTTCCTATTGTAAAATAAGCATAGC-TTCCAAAATACATAACATGTACCA  197
      ||||||| ||||||||||||||||| ||||||||||||| ||||||||||
seq2  GTTCCTA-TGTAAAATAAGCATAGCTTTCCAAAATACATTACATGTACCA  191

seq1  AAGATAAAGGAACTTTCAAGATTTTAACAAAACTGAGCAAAAGAAAATTA  247
      ||||||||||||||||||||||||| || |||||||||||||||||||||
seq2  AAGATAAAGGAACTTTCAAGATTTT-ACCAAACTGAGCAAAAGAAAATTA  240

seq1  CTTCAAGGAAGTATAAAAAAACAGTGTGCTTTTAAGAGATGGAGAGACAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGGAAGTATAAAAAAACAGTGTGCTTTTAAGAGATGGAGAGACAG  290

seq1  AGGAAGGACTTAAAATATGTTAATGATCTTACAGATAAAAATATGTAACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGACTTAAAATATGTTAATGATCTTACAGATAAAAATATGTAACT  340

seq1  ATGTTAATAATAAGAAATATAGTTTAAAACTCAGTGACCCAAATTTGGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATAATAAGAAATATAGTTTAAAACTCAGTGACCCAAATTTGGTT  390

seq1  TTAGTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTTAGAGGAATATTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTTAGAGGAATATTTTT  440

seq1  AGGACTAATGTTGCTTCCTGATTAAAAATATTTAATATGAAGGTGGTAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAATGTTGCTTCCTGATTAAAAATATTTAATATGAAGGTGGTAAA  490

seq1  TTAATTTAGCTTCAGGCTTTTTAAATAAAGTTTGGGTTAAATGCTATATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAGCTTCAGGCTTTTTAAATAAAGTTTGGGTTAAATGCTATATT  540

seq1  TTAATTTTAAAACATTGTGCAAAGTGTTATCCTCTTTTCTGTAAAATTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTAAAACATTGTGCAAAGTGTTATCCTCTTTTCTGTAAAATTAT  590

seq1  TTTTACCTAGCCATCTTTTTTTACTGTTTATAATAAATTACATTAAGTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTAGCCATCTTTTTTTACTGTTTATAATAAATTACATTAAGTAA  640

seq1  GATCTTATATTACTTTAAATTCTATTTAATATATATTTGCTATGGTTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTATATTACTTTAAATTCTATTTAATATATATTTGCTATGGTTATT  690

seq1  TTTGCTACTTAGATTGGCTTTTTTTTTTTATGTTTGGACTTTTTATCTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTACTTAGATTGGCTTTTTTTTTTTATGTTTGGACTTTTTATCTGT  740

seq1  GCCAATCAGAACAGAAGAGTATTTTCTGAATCACCTGGCTTCAGAGACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCAGAACAGAAGAGTATTTTCTGAATCACCTGGCTTCAGAGACTC  790

seq1  TGGGAAGCTATCTGTTCTATGCCATGAGGTCCTGAGCCAAATGTGACTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCTATCTGTTCTATGCCATGAGGTCCTGAGCCAAATGTGACTGA  840

seq1  ATAACACTTTCACAGCAGGTATGCCTGGGACCATGGGCATAGTCTCTAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTTTCACAGCAGGTATGCCTGGGACCATGGGCATAGTCTCTAGA  890

seq1  AAAATGGCCTCAAACATCCCACAAGCCTTTCAGAGAGAATTC  939
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCCTCAAACATCCCACAAGCCTTTCAGAGAGAATTC  932