BAC Information

Click to search

BAC

Clone NameB6Ng01-130H05
Chromosome2 (Build37)
Map Location 43,154,532 - 43,307,002
singlet/doubletdoublet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130H05.bB6Ng01-130H05.g
ACCDH931759DH931760
length884428
definitionDH931759|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H05, 5' end.DH931760|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,154,532 - 43,155,415)(43,306,569 - 43,307,002)
sequence
gaattctttgtttatttctgtacaccgttttttaatagggttatttggtt
ttctggagtccaacttcttgagttctttatatatattgaattatcccact
attggatttaaaattgataaagaccttttcccaatctgttggttaccatt
ttgtcttattgacagtgtcctttgcctacagaatctttgcaattttatga
ggtcccctttgtcaattcttgatcttacagcacaagctattggcgttctg
aaaaacaaaatttattaacaaaaaaataattcttaatttgagttagtaaa
gtctttctcactgtgggttttaaggtgacactaaatgttttggagattaa
atactaagtgattttaggggcattttagggtattgtcttgtttgccataa
ttgatgtgggaatagagcctgaaagtagggaataccatcccctgattctg
cttcttggattgcatacacttatagaaagcaaattgaacactgagcacag
atattacatctgtttctctttactcttggctgtagatgtgatgtgacttg
ctgtttcaatttcctgccttgactttcctcaacaatgatgaactgtaacc
tggaattgaaaggtaaataggttgctctcctctaagttactttttttttt
ctgcaagtattttgtcacaacagaaatgaaaataagacaaccagtatcct
gaacatgcttgtttcagttgaactgaaaacttaaatgcaccattaaatct
acttaacatcttaatattaagtacttaatattatatttatttaataaggt
ttgactttggcagacattgtttctaccataatttcagtgtatatgatttc
agatgggggtgggggacagagggtgtgtgtgtgt
tttgttcagttctgagccccattttttttaattaggtattttcttcgttt
acattttcaatgctattccaaaggtcccccatacccaccccccaatcata
atttatgtgtttttaactacacatttaacagtgcattgtgacactgttaa
tgataagaacaaagtttaaactgtggagtttccatattctctcagatcct
catttttaagaagatttctgagcgctagaaggaaaattagaaacatgagt
ggattggagtgcaagtattctgaagaaatgggatgaattatgtcatttat
ttttgtatttttttcatttaaaattctttttattggcttttcttattttc
ttggtttgttctctccttctccctccctccccgtcgtcgtcgtcttcgtc
gtcgacgtcgtcgtcctcctcctcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43154532_43155415
seq2: B6Ng01-130H05.b_44_927

seq1  GAATTCTTTGTTTATTTCTGTACACCGTTTTTTAATAGGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTATTTCTGTACACCGTTTTTTAATAGGGTTATTTGGTT  50

seq1  TTCTGGAGTCCAACTTCTTGAGTTCTTTATATATATTGAATTATCCCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCAACTTCTTGAGTTCTTTATATATATTGAATTATCCCACT  100

seq1  ATTGGATTTAAAATTGATAAAGACCTTTTCCCAATCTGTTGGTTACCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTTAAAATTGATAAAGACCTTTTCCCAATCTGTTGGTTACCATT  150

seq1  TTGTCTTATTGACAGTGTCCTTTGCCTACAGAATCTTTGCAATTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTATTGACAGTGTCCTTTGCCTACAGAATCTTTGCAATTTTATGA  200

seq1  GGTCCCCTTTGTCAATTCTTGATCTTACAGCACAAGCTATTGGCGTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCTTTGTCAATTCTTGATCTTACAGCACAAGCTATTGGCGTTCTG  250

seq1  AAAAACAAAATTTATTAACAAAAAAATAATTCTTAATTTGAGTTAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAATTTATTAACAAAAAAATAATTCTTAATTTGAGTTAGTAAA  300

seq1  GTCTTTCTCACTGTGGGTTTTAAGGTGACACTAAATGTTTTGGAGATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTCACTGTGGGTTTTAAGGTGACACTAAATGTTTTGGAGATTAA  350

seq1  ATACTAAGTGATTTTAGGGGCATTTTAGGGTATTGTCTTGTTTGCCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAGTGATTTTAGGGGCATTTTAGGGTATTGTCTTGTTTGCCATAA  400

seq1  TTGATGTGGGAATAGAGCCTGAAAGTAGGGAATACCATCCCCTGATTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGGGAATAGAGCCTGAAAGTAGGGAATACCATCCCCTGATTCTG  450

seq1  CTTCTTGGATTGCATACACTTATAGAAAGCAAATTGAACACTGAGCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGATTGCATACACTTATAGAAAGCAAATTGAACACTGAGCACAG  500

seq1  ATATTACATCTGTTTCTCTTTACTCTTGGCTGTAGATGTGATGTGACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATCTGTTTCTCTTTACTCTTGGCTGTAGATGTGATGTGACTTG  550

seq1  CTGTTTCAATTTCCTGCCTTGACTTTCCTCAACAATGATGAACTGTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCAATTTCCTGCCTTGACTTTCCTCAACAATGATGAACTGTAACC  600

seq1  TGGAATTGAAAGGTAAATAGGTTGCTCTCCTCTAAGTTACTTTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGAAAGGTAAATAGGTTGCTCTCCTCTAAGTTACTTTTTTTTTT  650

seq1  CTGCAAGTATTTTGTCACAACAGAAATGAAAATAAGACAACCAGTATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGTATTTTGTCACAACAGAAATGAAAATAAGACAACCAGTATCCT  700

seq1  GAACATGCTTGTTTCAGTTGAACTGAAAACTTAAATGCACCATTAAATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTTGTTTCAGTTGAACTGAAAACTTAAATGCACCATTAAATCT  750

seq1  ACTTAACATCTTAATATTAAGTACTTAATATTATATTTATTTAATAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACATCTTAATATTAAGTACTTAATATTATATTTATTTAATAAGGT  800

seq1  TTGACTTTGGCAGACATTGTTTCTACCATAATTTCAGTGTATATGATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTGGCAGACATTGTTTCTACCATAATTTCAGTGTATATGATTTC  850

seq1  AGATGGGGGTGGGGGACAGAGGGTGTGTGTGTGT  884
      ||||||||||||||||||||||||||||||||||
seq2  AGATGGGGGTGGGGGACAGAGGGTGTGTGTGTGT  884

seq1: chr2_43306569_43307002
seq2: B6Ng01-130H05.g_71_504 (reverse)

seq1  GGAGGAGGAGGAGGACGACGACGACGACGACGAAGACGACGACGACGGGG  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAGGAGGAGGAGGACGACGACGTCGACGACGAAGACGACGACGACGGGG  50

seq1  AGGGAGGGAGAAGGAGAGAACAAACCAAGAAAATAAGAAAAGCCAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAGAAGGAGAGAACAAACCAAGAAAATAAGAAAAGCCAATAAA  100

seq1  AAGAATTTTAAATGAAAAAAATACAAAAATAAATGACATAATTCATCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTTAAATGAAAAAAATACAAAAATAAATGACATAATTCATCCCA  150

seq1  TTTCTTCAGAATACTTGCACTCCAATCCACTCATGTTTCTAATTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAGAATACTTGCACTCCAATCCACTCATGTTTCTAATTTTCCTT  200

seq1  CTAGCGCTCAGAAATCTTCTTAAAAATGAGGATCTGAGAGAATATGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGCTCAGAAATCTTCTTAAAAATGAGGATCTGAGAGAATATGGAAA  250

seq1  CTCCACAGTTTAAACTTTGTTCTTATCATTAACAGTGTCACAATGCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGTTTAAACTTTGTTCTTATCATTAACAGTGTCACAATGCACTG  300

seq1  TTAAATGTGTAGTTAAAAACACATAAATTATGATTGGGGGGTGGGTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTGTAGTTAAAAACACATAAATTATGATTGGGGGGTGGGTATGG  350

seq1  GGGACCTTTGGAATAGCATTGAAAATGTAAACGAAGAAAATACCTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTTTGGAATAGCATTGAAAATGTAAACGAAGAAAATACCTAATTA  400

seq1  AAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  434
      ||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  434