BAC Information

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BAC

Clone NameB6Ng01-130N13
Chromosome2 (Build37)
Map Location 96,345,740 - 96,346,909
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream geneLOC100043267, Lrrc4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130N13.bB6Ng01-130N13.g
ACCDH932056DH932057
length1,147581
definitionDH932056|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N13, 5' end.DH932057|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccattaaaaatgtatcccaaaatgatccataaaatcttgtgt
aaggacagcccaatgatgctgaggccatgctatttgttccaataaaagat
ggaaattacgctgtcagatttgtcattgcacgctgataataatcactgtt
gtaaaatcagaatggataatatttcaagcaattgcttcatgaagatgttt
gccatagtgtgaaaataaactattataaaatattagcagaaaagcatgtt
tgtctataaataaataaatagggggaaatctatatatctttacactaagc
tattaagtgtgattgtcccttattaggaatggatataataagttttatga
agatgtgtatgtagatttatcagcaggagtcattgcaacttataataaat
gctattttcaaagtggggagctaaaagaatgggaaataatggtacaaagg
caaatattatgtccaaatagatgaagaaagacaacatcccttacacaata
cagatggtgaacaaagttaactctagcagacattacagtgaagactaaga
gacagaccttattaatcctcaaattcaccatggttccaaaagcaaatcag
caagattagcatggagagtgagtctttccataactacaggctttgaccta
tagagatgcttacagatgggtaaacaccgagcacctcatgatctccagat
actccccagagtctctactctccttctaacacccatgcagaatgctttgc
taagtgtcaggtccactgtgtgtaatcttatttcctctacgagcagctga
catgggtcctgagactatttccttaataaattccttgaactataatttta
acttcagcttctgcttccacagaactggacctgtgtcattttccttccag
ccatagggcaacttggctcagtgctttgatgtccagatggctgcttgaca
tcaaaactggaataatatctttattaccacataaaatgatgcatatcccc
ataggaaagagctctgatgtgcaaatgtcatccacaataattcactttcc
accctttttccactctttttcaaagacttcattttttaatttacctaaca
ccaggcctaacaaatgggtaccattccctagattctctaaggttcag

gaattcttcgtttaactctgtaccccattttaaaaataggtttgtttggt
tttctggagtcaaaatactatggaagaagttacagagacaaagttcggag
cagagactgaaggaacgaccatccagagactgccccacttgaggatccat
cccataaacaaccaccacacccagatactatggcagatgccaacaagagc
ctgctgacaggagcctgatatagctatctcctgaggagctctgctaggaa
aatacagaagtggatgctcacaatcatccactggacagagcacaaggtcc
ccaatgaaggagctagagaaagcacccatggagctgaaagggtctgaagc
cccataggaggaacatcaatatgaactaatgaattctcccagagctcctt
gacactaaaccaccaatcaaagaaaacacatggtggaacgtgtggctctg
gctgtatatgtagcagagaatggcctagtcggtcatcaatgggaggagag
gcccttggtcctgtgaagactctataccccagtattgggaaatggcagaa
ccaggaatgggagtgggtgggttggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96345740_96346909
seq2: B6Ng01-130N13.b_48_1194 (reverse)

seq1  CTGAACCTTAGAG-ATCTAGGGGTGATGGTACCAATTTTGTAAGGGCTGT  49
      ||||||||||||| ||||||||   |||||||| | ||||| ||| ||| 
seq2  CTGAACCTTAGAGAATCTAGGG--AATGGTACCCA-TTTGTTAGGCCTG-  46

seq1  GTGTTTAAGTTTAAATTTAAAAAAATGAAAGTCTATTTGGATAAGAGTGG  99
      |||||  ||  ||||||  |||||||| |||||  |||| | ||||||||
seq2  GTGTT--AG-GTAAATT--AAAAAATG-AAGTC--TTTGAAAAAGAGTGG  88

seq1  AAAAAAGGGTGGAAAGTGAAATTATTGTGGATGACATTTTGCACATCAAG  149
       ||||||||||||||||| ||||||||||||||||| |||||||||||  
seq2  -AAAAAGGGTGGAAAGTG-AATTATTGTGGATGACA-TTTGCACATCA--  133

seq1  GAGCTCTTTTCCTATGGGGATATTGCATTCATTTTATGTTGGTAATTAAA  199
      |||||| ||||||||||||||| |||| |||||||||| |||||| ||||
seq2  GAGCTC-TTTCCTATGGGGATA-TGCA-TCATTTTATG-TGGTAA-TAAA  178

seq1  GATATTTATTCCAGTTTTGATGTCCAAGCAGCCATCTGGACATCAAAGCA  249
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  GATA-TTATTCCAGTTTTGATGT-CAAGCAGCCATCTGGACATCAAAGCA  226

seq1  CTGAGCCAAGTTGCCCTATGGCTGGAAGGAAAATGACACAGGTCCAGTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCAAGTTGCCCTATGGCTGGAAGGAAAATGACACAGGTCCAGTTC  276

seq1  TGTGGAAGCAGAAGCTGAAGTTAAAATTATAGTTCAAGGAATTTATTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGCAGAAGCTGAAGTTAAAATTATAGTTCAAGGAATTTATTAAG  326

seq1  GAAATAGTCTCAGGACCCATGTCAGCTGCTCGTAGAGGAAATAAGATTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTCTCAGGACCCATGTCAGCTGCTCGTAGAGGAAATAAGATTAC  376

seq1  ACACAGTGGACCTGACACTTAGCAAAGCATTCTGCATGGGTGTTAGAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGACCTGACACTTAGCAAAGCATTCTGCATGGGTGTTAGAAGG  426

seq1  AGAGTAGAGACTCTGGGGAGTATCTGGAGATCATGAGGTGCTCGGTGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGACTCTGGGGAGTATCTGGAGATCATGAGGTGCTCGGTGTTT  476

seq1  ACCCATCTGTAAGCATCTCTATAGGTCAAAGCCTGTAGTTATGGAAAGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCTGTAAGCATCTCTATAGGTCAAAGCCTGTAGTTATGGAAAGAC  526

seq1  TCACTCTCCATGCTAATCTTGCTGATTTGCTTTTGGAACCATGGTGAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCCATGCTAATCTTGCTGATTTGCTTTTGGAACCATGGTGAATT  576

seq1  TGAGGATTAATAAGGTCTGTCTCTTAGTCTTCACTGTAATGTCTGCTAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATTAATAAGGTCTGTCTCTTAGTCTTCACTGTAATGTCTGCTAGA  626

seq1  GTTAACTTTGTTCACCATCTGTATTGTGTAAGGGATGTTGTCTTTCTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTTGTTCACCATCTGTATTGTGTAAGGGATGTTGTCTTTCTTCA  676

seq1  TCTATTTGGACATAATATTTGCCTTTGTACCATTATTTCCCATTCTTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGGACATAATATTTGCCTTTGTACCATTATTTCCCATTCTTTTA  726

seq1  GCTCCCCACTTTGAAAATAGCATTTATTATAAGTTGCAATGACTCCTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCACTTTGAAAATAGCATTTATTATAAGTTGCAATGACTCCTGCT  776

seq1  GATAAATCTACATACACATCTTCATAAAACTTATTATATCCATTCCTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTACATACACATCTTCATAAAACTTATTATATCCATTCCTAAT  826

seq1  AAGGGACAATCACACTTAATAGCTTAGTGTAAAGATATATAGATTTCCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACAATCACACTTAATAGCTTAGTGTAAAGATATATAGATTTCCCC  876

seq1  CTATTTATTTATTTATAGACAAACATGCTTTTCTGCTAATATTTTATAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTATTTATAGACAAACATGCTTTTCTGCTAATATTTTATAAT  926

seq1  AGTTTATTTTCACACTATGGCAAACATCTTCATGAAGCAATTGCTTGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTTCACACTATGGCAAACATCTTCATGAAGCAATTGCTTGAAA  976

seq1  TATTATCCATTCTGATTTTACAACAGTGATTATTATCAGCGTGCAATGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCCATTCTGATTTTACAACAGTGATTATTATCAGCGTGCAATGAC  1026

seq1  AAATCTGACAGCGTAATTTCCATCTTTTATTGGAACAAATAGCATGGCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGACAGCGTAATTTCCATCTTTTATTGGAACAAATAGCATGGCCT  1076

seq1  CAGCATCATTGGGCTGTCCTTACACAAGATTTTATGGATCATTTTGGGAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCATTGGGCTGTCCTTACACAAGATTTTATGGATCATTTTGGGAT  1126

seq1  ACATTTTTAATGGTGGAATTC  1170
      |||||||||||||||||||||
seq2  ACATTTTTAATGGTGGAATTC  1147


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