BAC Information

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BAC

Clone NameB6Ng01-132C21
Chromosome2 (Build37)
Map Location 136,416,820 - 136,528,646
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5
Downstream geneSnap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C21.bB6Ng01-132C21.g
ACCDH933050DH933051
length9981,139
definitionDH933050|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C21, 5' end.DH933051|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,528,111 - 136,528,646)(136,416,820 - 136,417,958)
sequence
gaattccattgaatgggtaacagaaacaaagcacagcaaaagagaaaata
aacatatatgggcaaggattggctgtttctagagccccgtgctgatggtg
aaagtagaaaatggtatagttacaacgagaacaatagtgatttttatgtt
ttttaactttttttattagatattttctttatttacatttcaaatgttat
cccctttcctagtttcccctctgaaaacaccctatcccatctcccccact
caccaacctactcactcccactctctggccctggcatttccttgtacttt
cacaggaccaagggcctcttctcccattggtggtttttaaaaagggattt
aaaaaatttaaaaacaggccatgcaattccatgtttgagtatatatcaaa
atttaattcataaagaaattattgtgtgtctgtctgcatagcaactttca
caatagacagaagcaatccactgtccattgatagacaaatgcagtccata
aatacagtgtgtgtgtttcagtcctaaaaagaaaaatgttataacatgtg
gacaacaaggagggaacttgaggaccaactgctaggcacagtgacaagag
aacaaatactgtatgagccacctactcacaggatctagaggacagaacgt
ggaatggtatctggaaagagaaggggaatcagggagaatgttttaatggg
cgtgggatgtttgctctgtaagatgacaaggtttctggggaagaacactg
ctgattggtacaagagaatgtgggtggatttaatgccgctgacctgtaca
ctaagcattagaaactactttgctacaactaaatggtgcattgtggtttg
tggactatttttagaaatcacaattttattgtgggccttgaatgatgatt
attaaaaatttattcccaggtatatctatgattttgacatgtttggtgaa
ctacagataagtcattggacagaaacacctcctgtccttttttcctgg
gaattctgggaaagagccatgcataggagattcacctaggaatgataaaa
gtcagactcatgatacctgagcacaggtaagtggctacagggcagaatgt
atattagaataggtgggataatttatgatctcataagagaaagggatagc
tgtatggcgaaggtatttgcaaatatattttgagtctgagtcttgttttt
gggagcatgggggtaggaggaagaatcagacctaacttctacaaacttga
aatttgttaaacacacaaagaccacaaaaccctgtaagtccttcacttgt
tcaccagaaagaaaaggataccaaatactgcaatgatcatgattgtcttg
gtcatggtgtctcttcatatcactgaacccttatctaagatacccagtag
catgtcatttgactgtttggtatgcatggcaaggaaccaacaagcagaga
acccacaactgttcccaaggcttcaactcagcttcagaccaaatgctgac
ataacctgcttaaattgctgtgagtacatccattactccacctgtccatt
catccatttcttctgtctagacctggtgctgcacctatcctctgcaactg
ttatcaactctgagtcctcacttaagcctgagtcccttcaccccacaaca
acctacttctatccttccagcaactgtctaacaggcttccttaatatttt
atacatccatttgtagtgcctgcttgcatcaataacagctctttaccttt
gccactagtgtgacccctttagctgtttgaaatctcctacagcctcttta
gctctttgttctgtataatgtgtttcttttgatctgagagttaatattgc
taactaaaattagaatataaagatcagagtttgccttatggtaagtttat
caaaaagcaggactactctgagaattacagccaataaaatccaagtagct
tatgatttgttgtttattaaatgaatttctgacatgtagaaagcataaac
atatacagtcatgtttctgctaatagcaaatacataatgtatttgcagtt
cagatcgcttcaggaagatactgaacaaaggaaaatataccttaccttct
taagacttgtcattgtcatctaaaaaaggacttgtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136528111_136528646
seq2: B6Ng01-132C21.b_45_580 (reverse)

seq1  TTTTTCTTTTTAGGACTGAAACACACACACTGTATTTATGGACTGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTAGGACTGAAACACACACACTGTATTTATGGACTGCATTT  50

seq1  GTCTATCAATGGACAGTGGATTGCTTCTGTCTATTGTGAAAGTTGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCAATGGACAGTGGATTGCTTCTGTCTATTGTGAAAGTTGCTATG  100

seq1  CAGACAGACACACAATAATTTCTTTATGAATTAAATTTTGATATATACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACACACAATAATTTCTTTATGAATTAAATTTTGATATATACTC  150

seq1  AAACATGGAATTGCATGGCCTGTTTTTAAATTTTTTAAATCCCTTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGAATTGCATGGCCTGTTTTTAAATTTTTTAAATCCCTTTTTAA  200

seq1  AAACCACCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAAGTACAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAAGTACAAGGAAA  250

seq1  TGCCAGGGCCAGAGAGTGGGAGTGAGTAGGTTGGTGAGTGGGGGAGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGCCAGAGAGTGGGAGTGAGTAGGTTGGTGAGTGGGGGAGATGG  300

seq1  GATAGGGTGTTTTCAGAGGGGAAACTAGGAAAGGGGATAACATTTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGTGTTTTCAGAGGGGAAACTAGGAAAGGGGATAACATTTGAAAT  350

seq1  GTAAATAAAGAAAATATCTAATAAAAAAAGTTAAAAAACATAAAAATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAAGAAAATATCTAATAAAAAAAGTTAAAAAACATAAAAATCAC  400

seq1  TATTGTTCTCGTTGTAACTATACCATTTTCTACTTTCACCATCAGCACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCTCGTTGTAACTATACCATTTTCTACTTTCACCATCAGCACGG  450

seq1  GGCTCTAGAAACAGCCAATCCTTGCCCATATATGTTTATTTTCTCTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGAAACAGCCAATCCTTGCCCATATATGTTTATTTTCTCTTTTG  500

seq1  CTGTGCTTTGTTTCTGTTACCCATTCAATGGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTTGTTTCTGTTACCCATTCAATGGAATTC  536

seq1: chr2_136416820_136417958
seq2: B6Ng01-132C21.g_66_1204

seq1  GAATTCTGGGAAAGAGCCATGCATAGGAGATTCACCTAGGAATGATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAAGAGCCATGCATAGGAGATTCACCTAGGAATGATAAAA  50

seq1  GTCAGACTCATGATACCTGAGCACAGGTAAGTGGCTACAGGGCAGAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACTCATGATACCTGAGCACAGGTAAGTGGCTACAGGGCAGAATGT  100

seq1  ATATTAGAATAGGTGGGATAATTTATGATCTCATAAGAGAAAGGGATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAATAGGTGGGATAATTTATGATCTCATAAGAGAAAGGGATAGC  150

seq1  TGTATGGCGAAGGTATTTGCAAATATATTTTGAGTCTGAGTCTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGCGAAGGTATTTGCAAATATATTTTGAGTCTGAGTCTTGTTTTT  200

seq1  GGGAGCATGGGGGTAGGAGGAAGAATCAGACCTAACTTCTACAAACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCATGGGGGTAGGAGGAAGAATCAGACCTAACTTCTACAAACTTGA  250

seq1  AATTTGTTAAACACACAAAGACCACAAAACCCTGTAAGTCCTTCACTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTAAACACACAAAGACCACAAAACCCTGTAAGTCCTTCACTTGT  300

seq1  TCACCAGAAAGAAAAGGATACCAAATACTGCAATGATCATGATTGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGAAAGAAAAGGATACCAAATACTGCAATGATCATGATTGTCTTG  350

seq1  GTCATGGTGTCTCTTCATATCACTGAACCCTTATCTAAGATACCCAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTGTCTCTTCATATCACTGAACCCTTATCTAAGATACCCAGTAG  400

seq1  CATGTCATTTGACTGTTTGGTATGCATGGCAAGGAACCAACAAGCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCATTTGACTGTTTGGTATGCATGGCAAGGAACCAACAAGCAGAGA  450

seq1  ACCCACAACTGTTCCCAAGGCTTCAACTCAGCTTCAGACCAAATGCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAACTGTTCCCAAGGCTTCAACTCAGCTTCAGACCAAATGCTGAC  500

seq1  ATAACCTGCTTAAATTGCTGTGAGTACATCCATTACTCCACCTGTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGCTTAAATTGCTGTGAGTACATCCATTACTCCACCTGTCCATT  550

seq1  CATCCATTTCTTCTGTCTAGACCTGGTGCTGCACCTATCCTCTGCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTCTTCTGTCTAGACCTGGTGCTGCACCTATCCTCTGCAACTG  600

seq1  TTATCAACTCTGAGTCCTCACTTAAGCCTGAGTCCCTTCACCCCACAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTCTGAGTCCTCACTTAAGCCTGAGTCCCTTCACCCCACAACA  650

seq1  ACCTACTTCTATCCTTCCAGCAACTGTCTAACAGGCTTCCTTAATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTCTATCCTTCCAGCAACTGTCTAACAGGCTTCCTTAATATTTT  700

seq1  ATACATCCA-TTGTAGTGCCTGCTTGCATCAATAACAGCTCTTTACCTTT  749
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCCATTTGTAGTGCCTGCTTGCATCAATAACAGCTCTTTACCTTT  750

seq1  GCCACTAGTGTGACCCCTTTAGCTGTTTGAAATCTCCTACAGCCTCTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTAGTGTGACCCCTTTAGCTGTTTGAAATCTCCTACAGCCTCTTTA  800

seq1  GCTCTTTGTTCTGTATAATGTGTT--CTTTGATCTGAGAGTTAATATTGC  847
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  GCTCTTTGTTCTGTATAATGTGTTTCTTTTGATCTGAGAGTTAATATTGC  850

seq1  TAACTAAAATTAGAATATAAAGATCAGAGTTTGCC-TATGGTAAG-TTAT  895
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  TAACTAAAATTAGAATATAAAGATCAGAGTTTGCCTTATGGTAAGTTTAT  900

seq1  CAAAAAAGCAGGACTACTCTGAGAATTACAGCCAATAAAATCCAAGTAGC  945
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AAAAAGCAGGACTACTCTGAGAATTACAGCCAATAAAATCCAAGTAGC  949

seq1  TTATTGATTTGTTGTTTATTAAATGAA-TTCTGACATTGTAGAAAGCCAT  994
      ||| ||||||||||||||||||||||| |||||||| ||||||||| |||
seq2  TTA-TGATTTGTTGTTTATTAAATGAATTTCTGACA-TGTAGAAAG-CAT  996

seq1  AAACATATACAGCCATGTTTCTGCT-ATAGCACATACAATTATGTATTTG  1043
      |||||||||||| |||||||||||| |||||| |||| || |||||||||
seq2  AAACATATACAGTCATGTTTCTGCTAATAGCAAATAC-ATAATGTATTTG  1045

seq1  CAGTCCCAGATCGCTTCAGGAAAGATACTG-ACAAAGGAGAATATACCTT  1092
      ||||  |||||||||||||| ||||||||| |||||||| ||||||||||
seq2  CAGT-TCAGATCGCTTCAGG-AAGATACTGAACAAAGGAAAATATACCTT  1093

seq1  ACCTCCTGTAGACTTGGCCATTGGCATCCAGAGAAAGACTTGTCTGA  1139
      |||| ||  |||||| | ||||| |||| | | || |||||||||||
seq2  ACCTTCTTAAGACTT-GTCATTGTCATCTAAAAAAGGACTTGTCTGA  1139