BAC Information

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BAC

Clone NameB6Ng01-132L17
Chromosome2 (Build37)
Map Location 112,633,532 - 112,767,909
singlet/doubletdoublet
Overlap geneRyr3
Upstream geneOlfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132L17.bB6Ng01-132L17.g
ACCDH933459DH933460
length1,1791,083
definitionDH933459|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L17, 5' end.DH933460|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,633,532 - 112,634,723)(112,766,816 - 112,767,909)
sequence
gaattccttttaaagtagaaattgccatactttgccccaaacaaatatag
tgtgtctagagaattattgttatgtgcatgtgtgtttggtatgcatgtgt
gtatctgtacttcatgcatgtctagtgcccacgaggtcagaagagaaagt
tggatacctcaagactggaactgccatgtggaggcaaatcctagttctct
ggaaaagcagccagtgcccttaagcaccgagaaatctctccagcctcaga
tcctgaattcttaacacttttcctttcctcattgacttttttctcctttc
tttctcaatctttcattctgtcctgataaaccaattccatgttaattctg
gagtatgattacttggagaagaagtgaaacaggttattcaaggatatact
aaaacaggccttgagagaagaaagcagtctagaaaggccgagaaggggag
aagcttgggtctagtggctagaaccgagaaatctagctgtagtgcaatta
taagtgaattatggttgtaacaaaatcttggttgacaatgtgcttttcaa
gaaagtagtctacttgtcttaaactatattgggccatcattctggtatga
tgaaagtgttttcgtagaactggggactcattacaaacacaaactcttga
cttgtgccaagagtaatagtatttaaggcagttatgacaattgccccttg
ggatggagatacctttaatagctatttgtttatttttgaactttcaatcc
atttcttcatccaccctcccacccactcatagactagtctaaagtcctgg
aggcacatgttcattaactctgtaaaatgagatgagaggagaaggggttt
tatagagaagtctaagcccatgtcatgagcttcttgctggatctatcact
agtttctcccgttgatgcttgtctggcctggtgtttcttgggagttctct
gccagttgctaataacatttaggatctattatactgaatattgacaaaag
caatggagtgtgctcttttttgtgtctatggcatataccctatcttagtc
tgaaagccatgagccgcatgggactcactggtttacgagaacgcaaactt
caggaggacagtagccttccctcgatgggttccagccaacgttaggtagc
tcttggcagagcatggggcgactctgaag
gaattctatctctgttccctttaaagtgtccccccatgcccctcactaat
attttgacctctatatgtattcaaaatgaaataaacatatcagaagcttc
aaaactcacacccacacctgagagatttgtctttctggatccaggtaatt
tcatgcagaatgattgtttccagctccacccattgacctgtaaacttcat
aattttattttttaacagcttaataatactccattgtgtaaaaataccac
tttttcattattcactcattggtttacagacacttagattgtttccattt
cctggctgttatgaaatttatgttaacaggtggtgttttaagctcctaaa
ttgtggcatttgtggtaaataagcatttaaattatggaagatatcaatta
ctgaaaatgagttgactgaccacttaaaagtcacttgctaacattatctc
tgttagggtgagggaagtagacatctaagagagaagcatataaaatcaga
ctagaatgaggaacctaccaactgcttcattttccatcgtcttgcagatc
cctgaagtatccaaagcttcaatgcattggttttacaattaacaacagat
aagagaagtcagagatgttctgaaatcctagctagcttggagacatgatt
atttggataatagctttttgtcttacagactctgcacaagtgatttgttt
tctacattgagtagctctgtaatcaggcatacctacatttgtctgtttgt
tgtttctctatttttgtgtggaataggaaatcaaggagaaattagattcc
agtcacaaaagagatatggaaggcatgggagttccagaaatcaagtacgg
gattctgtctgctttgttcagcatgtagccagtggcctttgggtcaccta
caaagcacaagatgccaaaacttcccgcctgggacctctgaaagaaagta
aagggtctatggtatacagggttacttacatttttattttttatttttta
cacgagtgggaaacagttagaacaggagtgactctgggaccaggtggcat
gattatgttttacccttaagaatgctctgtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112633532_112634723
seq2: B6Ng01-132L17.b_49_1227

seq1  GAATTCCTTTTAAAGTAGAAATTGCCATACTTTGCCCCAAACAAATATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTAAAGTAGAAATTGCCATACTTTGCCCCAAACAAATATAG  50

seq1  TGTGTCTAGAGAATTATTGTTATGTGCATGTGTGTTTGGTATGCATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAGAGAATTATTGTTATGTGCATGTGTGTTTGGTATGCATGTGT  100

seq1  GTATCTGTACTTCATGCATGTCTAGTGCCCACGAGGTCAGAAGAGAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGTACTTCATGCATGTCTAGTGCCCACGAGGTCAGAAGAGAAAGT  150

seq1  TGGATACCTCAAGACTGGAACTGCCATGTGGAGGCAAATCCTAGTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACCTCAAGACTGGAACTGCCATGTGGAGGCAAATCCTAGTTCTCT  200

seq1  GGAAAAGCAGCCAGTGCCCTTAAGCACCGAGAAATCTCTCCAGCCTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCAGCCAGTGCCCTTAAGCACCGAGAAATCTCTCCAGCCTCAGA  250

seq1  TCCTGAATTCTTAACACTTTTCCTTTCCTCATTGACTTTTTTCTCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATTCTTAACACTTTTCCTTTCCTCATTGACTTTTTTCTCCTTTC  300

seq1  TTTCTCAATCTTTCATTCTGTCCTGATAAACCAATTCCATGTTAATTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATCTTTCATTCTGTCCTGATAAACCAATTCCATGTTAATTCTG  350

seq1  GAGTATGATTACTTGGAGAAGAAGTGAAACAGGTTATTCAAGGATATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGATTACTTGGAGAAGAAGTGAAACAGGTTATTCAAGGATATACT  400

seq1  AAAACAGGCCTTGAGAGAAGAAAGCAGTCTAGAAAGGCCGAGAAGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGCCTTGAGAGAAGAAAGCAGTCTAGAAAGGCCGAGAAGGGGAG  450

seq1  AAGCTTGGGTCTAGTGGCTAGAACCGAGAAATCTAGCTGTAGTGCAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGGTCTAGTGGCTAGAACCGAGAAATCTAGCTGTAGTGCAATTA  500

seq1  TAAGTGAATTATGGTTGTAACAAAATCTTGGTTGACAATGTGCTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAATTATGGTTGTAACAAAATCTTGGTTGACAATGTGCTTTTCAA  550

seq1  GAAAGTAGTCTACTTGTCTTAAACTATATTGGGCCATCATTCTGGTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAGTCTACTTGTCTTAAACTATATTGGGCCATCATTCTGGTATGA  600

seq1  TGAAAGTGTTTTCGTAGAACTGGGGACTCATTACAAACACAAACTCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGTTTTCGTAGAACTGGGGACTCATTACAAACACAAACTCTTGA  650

seq1  CTTGTGCCAAGAGTAATAGTATTTAAGGCAGTTATGACAATTGCCCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCCAAGAGTAATAGTATTTAAGGCAGTTATGACAATTGCCCCTTG  700

seq1  GGATGGAGATACCTTTAATAGCTATTTGTTTATTTTTGAACTTTCAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGATACCTTTAATAGCTATTTGTTTATTTTTGAACTTTCAATCC  750

seq1  ATTTCTTCATCCACCCTCCCACCCACTCATAGACTAGTCTAAAGTCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCATCCACCCTCCCACCCACTCATAGACTAGTCTAAAGTCCTGG  800

seq1  AGGCACATGTTCATTAACTCTGTAAAATGAGATGAGAGGAGAAGGGG-TT  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGCACATGTTCATTAACTCTGTAAAATGAGATGAGAGGAGAAGGGGTTT  850

seq1  TATAGAGAAGTCTAAGCCCATGTCATGAGCTTCTTGCTGGATCTATCACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGAAGTCTAAGCCCATGTCATGAGCTTCTTGCTGGATCTATCACT  900

seq1  AGTTTCTCCCGTTGATGCTTGTCTGGCCTGGTGTTTCTTGGGAGTTCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTTTCTCCCGTTGATGCTTGTCTGGCCTGGTGTTTCTTGGGAGTTCTC-  949

seq1  TGCCAGTTGCTAATAACATTTAGAATCTATTATACTGAATATTGACAAAA  999
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  TGCCAGTTGCTAATAACATTTAGGATCTATTATACTGAATATTGAC-AAA  998

seq1  AGCAATGAAGGTGTGCTC-TTTTTGTGTCTATGGCCATAATTACCCTACC  1048
      ||||||| | |||||||| ||||||||||||||| ||||  ||||||| |
seq2  AGCAATGGA-GTGTGCTCTTTTTTGTGTCTATGG-CATA--TACCCTATC  1044

seq1  CTAGGTCTGAGAGGCATGGAGCGCATGGGACTCACT-GTTTACGAAGACG  1097
       || |||||| || ||||   ||||||||||||||| ||||||| |||  
seq2  TTA-GTCTGAAAGCCATGAGCCGCATGGGACTCACTGGTTTACG-AGAAC  1092

seq1  GCAAACCTCAGGAAGGACAGGTAGCGCTCCCCTTCGATGGGGTTCCAGCC  1147
      |||||| ||||| |||||| |||||  ||||  ||||| |||||||||||
seq2  GCAAACTTCAGG-AGGACA-GTAGCCTTCCC--TCGAT-GGGTTCCAGCC  1137

seq1  AACGTCAGGGTAGCCTCTGGCCAGAAGCATGGGGCAGCTCTGAAG  1192
      ||||| | ||||| |||| | ||| ||||||||||  ||||||||
seq2  AACGTTA-GGTAG-CTCTTGGCAG-AGCATGGGGCGACTCTGAAG  1179

seq1: chr2_112766816_112767909
seq2: B6Ng01-132L17.g_64_1146 (reverse)

seq1  GTCACAGAGCCACTCTTTAAAGGGTAAAACATAATCATGCCCACCTGGTC  50
      ||||||||| || ||||  |||||||||||||||||||| ||||||||| 
seq2  GTCACAGAG-CATTCTT--AAGGGTAAAACATAATCATG-CCACCTGGT-  45

seq1  CCCAGAGTCACTCCTG-TCTAACTGTTTCCCACTCCGTGTAAAAAATAAA  99
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  CCCAGAGTCACTCCTGTTCTAACTGTTTCCCACT-CGTGTAAAAAATAAA  94

seq1  AAATAAAAATGTAAGTAAACCCTGTATAACCATTAGACCCTTTACCTTTC  149
      |||||||||||||||| |||||||||| |||| ||||||||||| |||||
seq2  AAATAAAAATGTAAGT-AACCCTGTAT-ACCA-TAGACCCTTTA-CTTTC  140

seq1  TTTTCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTTGTGCTTTGTAGGTG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTTGTGCTTTGTAGGTG  189

seq1  ACCCAAAGGCCACTGGCTACATGCTGAACAAAGCAGACAGAATCCCCGTA  249
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCCAAAGGCCACTGGCTACATGCTGAACAAAGCAGACAGAAT-CCCGTA  238

seq1  CTTGATTTCTGGAACTCCCATGCCTTCCATATCTCTTTTGTGACTGGAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTCTGGAACTCCCATGCCTTCCATATCTCTTTTGTGACTGGAAT  288

seq1  CTAATTTCTCCTTGATTTCCTATTCCACACAAAAATAGAGAAACAACAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCTCCTTGATTTCCTATTCCACACAAAAATAGAGAAACAACAAA  338

seq1  CAGACAAATGTAGGTATGCCTGATTACAGAGCTACTCAATGTAGAAAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAATGTAGGTATGCCTGATTACAGAGCTACTCAATGTAGAAAACA  388

seq1  AATCACTTGTGCAGAGTCTGTAAGACAAAAAGCTATTATCCAAATAATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTGTGCAGAGTCTGTAAGACAAAAAGCTATTATCCAAATAATCA  438

seq1  TGTCTCCAAGCTAGCTAGGATTTCAGAACATCTCTGACTTCTCTTATCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAAGCTAGCTAGGATTTCAGAACATCTCTGACTTCTCTTATCTG  488

seq1  TTGTTAATTGTAAAACCAATGCATTGAAGCTTTGGATACTTCAGGGATCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATTGTAAAACCAATGCATTGAAGCTTTGGATACTTCAGGGATCT  538

seq1  GCAAGACGATGGAAAATGAAGCAGTTGGTAGGTTCCTCATTCTAGTCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACGATGGAAAATGAAGCAGTTGGTAGGTTCCTCATTCTAGTCTGA  588

seq1  TTTTATATGCTTCTCTCTTAGATGTCTACTTCCCTCACCCTAACAGAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATGCTTCTCTCTTAGATGTCTACTTCCCTCACCCTAACAGAGAT  638

seq1  AATGTTAGCAAGTGACTTTTAAGTGGTCAGTCAACTCATTTTCAGTAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGCAAGTGACTTTTAAGTGGTCAGTCAACTCATTTTCAGTAATT  688

seq1  GATATCTTCCATAATTTAAATGCTTATTTACCACAAATGCCACAATTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTCCATAATTTAAATGCTTATTTACCACAAATGCCACAATTTAG  738

seq1  GAGCTTAAAACACCACCTGTTAACATAAATTTCATAACAGCCAGGAAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAAAACACCACCTGTTAACATAAATTTCATAACAGCCAGGAAATG  788

seq1  GAAACAATCTAAGTGTCTGTAAACCAATGAGTGAATAATGAAAAAGTGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATCTAAGTGTCTGTAAACCAATGAGTGAATAATGAAAAAGTGGT  838

seq1  ATTTTTACACAATGGAGTATTATTAAGCTGTTAAAAAATAAAATTATGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACACAATGGAGTATTATTAAGCTGTTAAAAAATAAAATTATGAA  888

seq1  GTTTACAGGTCAATGGGTGGAGCTGGAAACAATCATTCTGCATGAAATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGGTCAATGGGTGGAGCTGGAAACAATCATTCTGCATGAAATTA  938

seq1  CCTGGATCCAGAAAGACAAATCTCTCAGGTGTGGGTGTGAGTTTTGAAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATCCAGAAAGACAAATCTCTCAGGTGTGGGTGTGAGTTTTGAAGC  988

seq1  TTCTGATATGTTTATTTCATTTTGAATACATATAGAGGTCAAAATATTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATATGTTTATTTCATTTTGAATACATATAGAGGTCAAAATATTAG  1038

seq1  TGAGGGGCATGGGGGGACACTTTAAAGGGAACAGAGATAGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCATGGGGGGACACTTTAAAGGGAACAGAGATAGAATTC  1083