BAC Information

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BAC

Clone NameB6Ng01-134L19
Chromosome2 (Build37)
Map Location 38,456,203 - 38,457,017
singlet/doubletsinglet
Overlap genePsmb7
Upstream geneStrbp, LOC639491, Dennd1a, LOC100040947, Lhx2, Nek6
Downstream geneLOC674251, Nr5a1, Nr6a1, Olfml2a, LOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134L19.bB6Ng01-134L19.g
ACCDH934959DH934960
length3511,169
definitionDH934959|Mus musculus domesticus DNA, BAC clone: B6Ng01-134L19, 5' end.DH934960|Mus musculus domesticus DNA, BAC clone: B6Ng01-134L19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaagtcaaagatcattatatcactttaattttctgctatcatcatagttc
caattttaggaaatgatattccggtgctgtaactaccagtgtgctgcatt
ctaaggacacagtgttccctggaagcattttcacaaagctatactaacca
agcagcatttgcattgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgagcataacctgatatcagttttagtttctgcactgcttcatggc
tagaaaagagtggtataaattatctcacagaaaaccacaagtaacattat
ctgtgaagtttaaaactttaactaccttcctgaggtatgctgctggtgtc
t
gaattccaaagtgagaccctgtacatgacagccagagaatagagtcaggc
atggcagcttacacctgcaattccagcactccaggctgatgcaggagaat
tgccaccaatcagaggctagcctggactacagagtgatggtttatctcca
acaaaaaatttaaaactcagaaaaaaatgtttaaattaaacaaaaataat
gaagtgggggaccgagaaataataaaaacaaaacaaaggggttaaatcct
agctctatacaagaaaactatgactttctaggttaaagaggcttgaccga
agccagagtgttgaggaacgttgcgtgcaatggtatagatataattcaaa
tgagcaagtttaacttactcaaatattatgtcgaacagtagtaaaatcac
tgtggaactcactatttttttttatttttattgaagccccccaccagccc
tgcctcttgcataacccctccaccccatccccctcccattctcctccaag
aaggggtacctctcttctctgtaccaacccagcctggtacatcctctccc
actgaggccatacaagacagtcaagttaggggaacagtatacactggcca
gcagcagagtcagggacagcacccactccagttggaggacctcatgaaga
ccaagctgtacatctgctacatatgtagggaaggcctaggtccagtcaat
gcttgctctttggttggtggctgagtctctgagagccccaagggtccagg
atacttgactctgttgatcttcctatggagttcctatccccttcagagcc
ctcaatcctacacacacacacacacacacacacacgactccctgggctcc
ctccaatgtttggctgtgggtctattttgcatctatttcagccagttgct
gggtggagccctcttagtggagttactctaggctcctgtctgcaagcata
acagagtatcatttaataggaactcagtatttttttttaacttgaagcag
gctgcaatgggggcatgcctaatatcccagccctcactggggtagctgga
aagtcagagaccagcccaagctacatatgagacactgtctcaagcttaac
aaacaattccttagttggtaacgtggagagaaaaaacccctctgaacctc
caaattctaatatgggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_38456203_38457017
seq2: B6Ng01-134L19.b_52_402

seq1  AAAGTCAAAGATCATTATATCACTTTAATTTTCTGCTATCATCATAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAAGATCATTATATCACTTTAATTTTCTGCTATCATCATAGTTC  50

seq1  CAATTTTAGGAAATGATATTCCGGTGCTGTAACTACCAGTGTGCTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAGGAAATGATATTCCGGTGCTGTAACTACCAGTGTGCTGCATT  100

seq1  CTAAGGACACAGTGTTCCCTGGAAGCATTTTCACAAAGCTATACTAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACACAGTGTTCCCTGGAAGCATTTTCACAAAGCTATACTAACCA  150

seq1  AGCAGCATTTGCATTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATTTGCATTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200

seq1  TGTGTTAGCATAACCTGATATCAGTTTTAGTTTCTGCACAGCTTCAGGGC  250
      ||||| ||||||||||||||||||||||||||||||||| |||||| |||
seq2  TGTGTGAGCATAACCTGATATCAGTTTTAGTTTCTGCACTGCTTCATGGC  250

seq1  TAGGAAAGAGTGGTATAAATTATCTCACAGAAAACCACAAGTAACATTAT  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAGTGGTATAAATTATCTCACAGAAAACCACAAGTAACATTAT  300

seq1  CTGTGAAGGTTAAAACTTTAACTACCTTCCTGAGGTATGCTGCTGGGGTC  350
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  CTGTGAAGTTTAAAACTTTAACTACCTTCCTGAGGTATGCTGCTGGTGTC  350

seq1  TCATTACAGCTGGTAATCTCACATTCCACCATGCACAACACACTAAGTAC  400
      |                                                 
seq2  T-------------------------------------------------  351

seq1  CAGCATCTCCCAATTACACTGCCACATAAATCTCAAAGGACATCTGAAAA  450
                                                        
seq2  --------------------------------------------------  351

seq1  GTCTACACAGCTCCTGCACCCACTGCTGAAACACAACCACCTCTAATGGA  500
                                                        
seq2  --------------------------------------------------  351

seq1  ACATGGCAGCTTTCTAAACTTAAATATTCACATGCAGGGACAGGGCTGCT  550
                                                        
seq2  --------------------------------------------------  351

seq1  AAGCTCCAGTCCTAGCACACAGTGGAGAACACATGCTAATTAAAAGGCCA  600
                                                        
seq2  --------------------------------------------------  351

seq1  CACTAACTCAAAAAATGACCACTCAGACAACTTTAGACATTGTACACGTC  650
                                                        
seq2  --------------------------------------------------  351

seq1  TGGAGTTTTGCTTTCCTATTTCCAAATATGCTAAACTTCTAGGGCTACAA  700
                                                        
seq2  --------------------------------------------------  351

seq1  ATGGCAGAGCCTCACCAAGTACCTTTGTACAGAATAAACTCCTCTTTGAG  750
                                                        
seq2  --------------------------------------------------  351

seq1  CTGGTGTCCTACTCGTCCACAAACCCCAACTTATGTGACAAGCTGCATGC  800
                                                        
seq2  --------------------------------------------------  351

seq1  CCTCTGCAATTGTCT  815
                     
seq2  ---------------  351