BAC Information

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BAC

Clone NameB6Ng01-135L05
Chromosome2 (Build37)
Map Location 89,814,794 - 89,978,250
singlet/doubletdoublet
Overlap geneOlfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269
Upstream geneOlfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259
Downstream geneOlfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135L05.bB6Ng01-135L05.g
ACCDH935672DH935673
length1,1381,131
definitionDH935672|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L05, 5' end.DH935673|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,814,794 - 89,815,955)(89,977,120 - 89,978,250)
sequence
gaattcctgatctaaaaatcacataagcataagaacccatagggttctga
gtttacaacccattttgttccagactttcaggaatcaatgaaggtgtccc
taggcttccttggagaaagatttgaaatagccggcttcagcacctgctac
tccaaggaaaggtacacataggactgactgatctctgcagcttgcaatcc
ctaacttttctatgttcctgttctttgctatttgaggattttatatcagg
taagatctcaaattcagggttttatattaggtaaaatgatatattttacc
taatcatccaggcagatacatagaaaagtagcttagaaaaagatgtgcta
tgatgcttgggtgttttatcccaccaattttttgaatactttgaagctga
ctttaacatgttttattttcatcttggaatgcttatccctcatattcaca
ggattgtatgacttttagagcaaaagaaatctgacaaatccttttgttgg
caatgagttttgggtcactgacaaggaaaataagtacatttaaagaaaaa
tgggtacatttgagaggaagcagctagtgaaaggttagggaatgctaact
tcacaggagcaaatctctgccaagaaacaactgacttgtcatgaaatgta
aatatttagaggaaaatataacctgcattttccttatgaatgttgtccct
ttgagctggtgtctctgtatatgagtcagggtgctcttacactcacacct
caagcctcagcttctgtagaactcaaattacaagtgtctgcctgtctgct
tagcttgtttctgagtaatatagtaaattcagacaagatagatttaaata
tgtgtttctaatgctgtaattttggtcatgaaagtaaccaaatctcctaa
taagctaaggatcactctggataccatgggcctcaaacttaatagtaaag
gaaagttcttataaatatttactactgaaaataacattctttgtataaac
tcagatcttttgtgacacaaaaattttctattttctttcttttttttaat
tctttgtttacatcagcatgcattatcagtataagtgtggcttttttcta
acgtttctgtggatgtagccttggaatataagctactt
gaattccatcatgtcataggtatcagtatttttaagtatgttcaaattgg
tctattttacatctctttttttagtgatttatagtgtgtacgatttagga
atagaacttctctaatgtgtggatataaaagttctcacattgaaagaaat
gaaatagtttattcttgagctgatatgagtaaagtgtgggactatagatt
caggttacacaagcaccatgtttcactgtgggaacaggttcatagaaaat
aaaggtaatagatcaaggcactttaaaatacattggtaagaatatcaggc
tgataggttatggggcagtgttgggggaatctgttcttggattcagatgt
catatgataacattcttagtttttgggttggtgaagatggtggtctgtta
agttaatacataccccaaagatcatgcaatagtcacaatctaataattag
tcacattagattaagtaagaagtggacaatggatagctgtaatgactcta
aagctaatccatgataattttgcatggatcttaaccttccaaaattgtaa
gtttttcagaattgtccgtttttcagaatcttaaacatgtgtagcttttc
cctgggaatcccagttcacaaaatgaaccctactcagctacctatcagct
ctgtggccttagttttattcattttccttcagatgttaccatgctattgt
atgtgaagggatcttggcatccaatagctaaagtatttgttttatattgt
ctgcttgcaattttggaggaagtcccaggactccttccctgattctacac
atgtattccctaggctggccagattgaatgagcagctgtccttcactctc
cacatgtgtgttctttttaggtaaccttacatgacagtcacacacacagg
aactgagctacacatgaataaagacatcaaggtgatgacatattattcat
catttggaggggattgggtcagtatgaggattacaggaaccaaggaggga
ttttcttagacgtaccttatttgagcttctagctattacggtgtatgtta
tagaatcctgcaatgaaaagacatcaactttacaaactgtgatgggggaa
tcccctctattcttattttcaattatgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89814794_89815955
seq2: B6Ng01-135L05.b_48_1185

seq1  GAATTCCTGATCTAAAAATCACATAAGCATAAGAACCCATAGGGTTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTAAAAATCACATAAGCATAAGAACCCATAGGGTTCTGA  50

seq1  GTTTACAACCCATTTTGTTCCAGACTTTCAGGAATCAATGAAGGTGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAACCCATTTTGTTCCAGACTTTCAGGAATCAATGAAGGTGTCCC  100

seq1  TGGGCTTCCTTGGAGAAAGATTTGAAATAGCCGGCTTCAGCACCTGCTAC  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTCCTTGGAGAAAGATTTGAAATAGCCGGCTTCAGCACCTGCTAC  150

seq1  TCCAAGGAAAGGTACACATAGGACTGACTGATCTCTGCAGCTTGCAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGAAAGGTACACATAGGACTGACTGATCTCTGCAGCTTGCAATCC  200

seq1  CTAACTTTTCTATGTTCCTGTTCTTTGCTATTTGAGGATTTTATATCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTTTCTATGTTCCTGTTCTTTGCTATTTGAGGATTTTATATCAGG  250

seq1  TAAGATCTCAAATTCAGGGTTTTATATTAGGTAAAATGATATATTTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTCAAATTCAGGGTTTTATATTAGGTAAAATGATATATTTTACC  300

seq1  TAATCATCCAGGCAGATACATAGAAAAGTAGCTTAGAAAAAGATGTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATCCAGGCAGATACATAGAAAAGTAGCTTAGAAAAAGATGTGCTA  350

seq1  TGATGCTTGGGTGTTTTATCCCACCAATTTTTTGAATACTTTGAAGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTGGGTGTTTTATCCCACCAATTTTTTGAATACTTTGAAGCTGA  400

seq1  CTTTAACATGTTTTATTTTCATCTTGGAATGCTTATCCCTCATATTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACATGTTTTATTTTCATCTTGGAATGCTTATCCCTCATATTCACA  450

seq1  GGATTGTATGACTTTTAGAGCAAAAGAAATCTGACAAATCCTTTTGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTATGACTTTTAGAGCAAAAGAAATCTGACAAATCCTTTTGTTGG  500

seq1  CAATGAGTTTTGGGTCACTGACAAGGAAAATAAGTACATTTAAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGTTTTGGGTCACTGACAAGGAAAATAAGTACATTTAAAGAAAAA  550

seq1  TGGGTACATTTGAGAGGAAGCAGCTAGTGAAAGGTTAGGGAATGCTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACATTTGAGAGGAAGCAGCTAGTGAAAGGTTAGGGAATGCTAACT  600

seq1  TCACAGGAGCAAATCTCTGCCAAGAAACAACTGACTTGTCATGAAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAGCAAATCTCTGCCAAGAAACAACTGACTTGTCATGAAATGTA  650

seq1  AATATTTAGAGGAAAATATAACCTGCATTTTCCTTATGAATGTTGTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAGAGGAAAATATAACCTGCATTTTCCTTATGAATGTTGTCCCT  700

seq1  TTGAGCTGGTGTCTCTGTATATGAGTCAGGGTGCTCTTACACTCACACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGGTGTCTCTGTATATGAGTCAGGGTGCTCTTACACTCACACCT  750

seq1  CAAGCCTCAGCTTCTGTAGAACTCAAATTACAAGTGTCTGCCTGTCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTCAGCTTCTGTAGAACTCAAATTACAAGTGTCTGCCTGTCTGCT  800

seq1  TAGCTTGTTTCTGAGTAATATAGTAAATTCAGACAAGATAGATTTAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTTTCTGAGTAATATAGTAAATTCAGACAAGATAGATTTAAATA  850

seq1  TGTGTTTCTAATGCTGTAATTTTGGTCATGAAAGTAACCAAATCTCCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTAATGCTGTAATTTTGGTCATGAAAGTAACCAAATCTCCTAA  900

seq1  TAAGCTAAGGATCACTCTGGATACCAT-GGCCTCAAACTTAATAGTAAAG  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAAGCTAAGGATCACTCTGGATACCATGGGCCTCAAACTTAATAGTAAAG  950

seq1  GAAAGTTCTTATTAAATTATTTAACTAACTGAAAAATAACATTCTTTTGT  999
      ||||||||||||  || ||||| ||| |||| |||||||||||| |||||
seq2  GAAAGTTCTTAT--AAATATTT-ACT-ACTG-AAAATAACATTC-TTTGT  994

seq1  ATAAAACTCAGAATCTTTTGTTGACACAAAAAATTTTCTAATTTTCTTTC  1049
      || |||||||| |||||||| |||||| ||||||||||| ||||||||||
seq2  AT-AAACTCAG-ATCTTTTG-TGACAC-AAAAATTTTCT-ATTTTCTTTC  1039

seq1  TTTTTTTAAAATTCTTTGGTTTTTACAATTCAGGCATGCATTATCAGTAT  1099
      |||||||  |||||||||   ||||||  ||| |||||||||||||||||
seq2  TTTTTTT-TAATTCTTTG---TTTACA--TCA-GCATGCATTATCAGTAT  1082

seq1  ACAGTGTG--CTTTTTCTAAAGTGTTTCTGTGGATAGTTAGCTTTTGAGA  1147
      | ||||||   |||||||||   ||||||||||||   |||| || |   
seq2  A-AGTGTGGCTTTTTTCTAA--CGTTTCTGTGGAT--GTAGCCTTGG---  1124

seq1  TAATTTAAGCTACTT  1162
       ||| ||||||||||
seq2  -AATATAAGCTACTT  1138

seq1: chr2_89977120_89978250
seq2: B6Ng01-135L05.g_70_1200 (reverse)

seq1  GACACA-AATTG-AAATAAGGAT-GAGGGGAAT-CCCCAT-GCAGTTTGT  45
      |||||| ||||| ||||||| || ||||||| | ||||||  ||||||||
seq2  GACACATAATTGAAAATAAGAATAGAGGGGATTCCCCCATCACAGTTTGT  50

seq1  AAAGTTGATGTCTTTTCATTGCAGGATTCTATTAACAT-CACTGTAATAG  94
      ||||||||||||||||||||||||||||||| |||||| ||| |||||||
seq2  AAAGTTGATGTCTTTTCATTGCAGGATTCTA-TAACATACACCGTAATAG  99

seq1  CTAG-AGCTCAAATAAGGTAACGTCTAAGAAAATCCCTCCTTGGTTCCTG  143
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTAGAAGCTCAAATAAGGT-ACGTCTAAGAAAATCCCTCCTTGGTTCCTG  148

seq1  GTATCCTCATACTGACCCAATCCCCTCCAAATGATGAATAATATTGTCAT  193
        ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAATCCTCATACTGACCCAATCCCCTCCAAATGATGAATAATA-TGTCAT  197

seq1  CACCTTGATGTCTTTATTCATTGTGTAGCTCAGTTCCTGTTGTGTGTGAC  243
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  CACCTTGATGTCTTTATTCA-TGTGTAGCTCAGTTCCTG-TGTGTGTGAC  245

seq1  TTGTCATGTAAGGTTACCTGAAAAGAACACACATGTGGAGAGTGAAGGAC  293
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -TGTCATGTAAGGTTACCTAAAAAGAACACACATGTGGAGAGTGAAGGAC  294

seq1  AAGCTGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAG  343
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGCTGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAG  343

seq1  GGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAAC  393

seq1  AAATACTTTAGCTATTGGATGCCAAGATCCCTTCACATACAATAGCATGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTTAGCTATTGGATGCCAAGATCCCTTCACATACAATAGCATGG  443

seq1  TAACATCTGAAGGAAAATGAATAAAACTAAGGCCACAGAGCTGATAGGTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTGAAGGAAAATGAATAAAACTAAGGCCACAGAGCTGATAGGTA  493

seq1  GCTGAGTAGGGTTCATTTTGTGAACTGGGATTCCCAGGGAAAAGCTACAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTAGGGTTCATTTTGTGAACTGGGATTCCCAGGGAAAAGCTACAC  543

seq1  ATGTTTAAGATTCTGAAAAACGGACAATTCTGAAAAACTTACAATTTTGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAGATTCTGAAAAACGGACAATTCTGAAAAACTTACAATTTTGG  593

seq1  AAGGTTAAGATCCATGCAAAATTATCATGGATTAGCTTTAGAGTCATTAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAAGATCCATGCAAAATTATCATGGATTAGCTTTAGAGTCATTAC  643

seq1  AGCTATCCATTGTCCACTTCTTACTTAATCTAATGTGACTAATTATTAGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCCATTGTCCACTTCTTACTTAATCTAATGTGACTAATTATTAGA  693

seq1  TTGTGACTATTGCATGATCTTTGGGGTATGTATTAACTTAACAGACCACC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTATTGCATGATCTTTGGGGTATGTATTAACTTAACAGACCACC  743

seq1  ATCTTCACCAACCCAAAAACTAAGAATGTTATCATATGACATCTGAATCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCACCAACCCAAAAACTAAGAATGTTATCATATGACATCTGAATCC  793

seq1  AAGAACAGATTCCCCCAACACTGCCCCATAACCTATCAGCCTGATATTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGATTCCCCCAACACTGCCCCATAACCTATCAGCCTGATATTCT  843

seq1  TACCAATGTATTTTAAAGTGCCTTGATCTATTACCTTTATTTTCTATGAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGTATTTTAAAGTGCCTTGATCTATTACCTTTATTTTCTATGAA  893

seq1  CCTGTTCCCACAGTGAAACATGGTGCTTGTGTAACCTGAATCTATAGTCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCCACAGTGAAACATGGTGCTTGTGTAACCTGAATCTATAGTCC  943

seq1  CACACTTTACTCATATCAGCTCAAGAATAAACTATTTCATTTCTTTCAAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTACTCATATCAGCTCAAGAATAAACTATTTCATTTCTTTCAAT  993

seq1  GTGAGAACTTTTATATCCACACATTAGAGAAGTTCTATTCCTAAATCGTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACTTTTATATCCACACATTAGAGAAGTTCTATTCCTAAATCGTA  1043

seq1  CACACTATAAATCACTAAAAAAAGAGATGTAAAATAGACCAATTTGAACA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATAAATCACTAAAAAAAGAGATGTAAAATAGACCAATTTGAACA  1093

seq1  TACTTAAAAATACTGATACCTATGACATGATGGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAAATACTGATACCTATGACATGATGGAATTC  1131