BAC Information

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BAC

Clone NameB6Ng01-137C15
Chromosome2 (Build37)
Map Location 42,971,157 - 42,972,359
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C15.bB6Ng01-137C15.g
ACCDH936751DH936752
length1,1891,239
definitionDH936751|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C15, 5' end.DH936752|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaaatcagggctcatggtggcactaacaagaaagggaagaa
tcttctactctcaaatctagagcattagtacagcacagaagcctagtctg
agcatcaccccggctgctgtacacagaaggaacaaagaatgtatttcaga
gcattggaggaaagaaagaagagaagcacagtgtcatgtgctctgtgtga
acaaaaatcactttaaaaaaattactaatagcactttaataacaatgtaa
tttcaagatactttaaaagcccctgttcttcttcttcttttttaaattca
ttttacatcctgctatcctccttactacccatcctcctggtcaccacctc
ccacaatccttttctcctctccctccccttctcctctgacatagtggaga
ccacccctgggtatcccctaagcctgacaaatcaagtctctgctgggcta
gacccattctctcccacaaagcaggccatctagaacatatcccacagaca
agcagcagctttgggacaacctccactccagttggccattactaagtgca
ctcatggagggtgtgacttctgtactgtcatgctcctaccaagccctgta
cagtagtcaaggcttcatcagtatccttataattgtttaaaatcctgtca
ctatttctcctatatgctcaagtctaacagagttccctgcttaaaagtgt
tatataaatctcaaataaatttacaattattaaaataagtaataatagag
aaaacagcactggatttgaattatccatattatagaggtggacatgttgc
tagtgtttgtaggctgatgtaatctatatatgataattcacatagtatgt
taggaataatacatcaacatgaaatgataattcatgctgtatctggacat
aacttactctttgattatttgctacatgtccttcagtaatctacacactg
gtcagggaagcaagaaaggagattgattggggcctataaacatctccatg
acatggacttagatactgccagaggagcactgagtgcaaatgaccataag
taaagtgagatatgtatttgttcatggtggtacatgaaaagtcaatgata
tgtacaacgtgttgaggtttaaatgtcaaataaaaaattcattggtattg
taaggaaagggattggcatctgtcacgagtgaaagtctt
gaattcagtaagaatgttacctattcagtaacattcaaatttacttctag
tggagagtgaaactaattaggcattacaatttacttgaataggtctagtc
tacatattaattatttagaacaatagcagagtcacacccatacacaggca
tacacaatggcctaggaaataggtgggttgtaatattattcatgaaagca
ttagtagaatggaattccccttgtgcaggtttttcactaggcccagagga
atagcataatcaggtatttactaaaggacccctggtggtgggtttaacaa
tagactagctttgcatcagagcattctcctggctcctgtgtttagctgat
cttaattaagggttgttcctattctcagttgtaaacttagccttgcttcc
accatctttttatgtatgcattttctttgttttgtgcaagaaccagtgaa
acctgacagatgtatttgtctagctttcttgtttttcttctgtattataa
gactggtgctcgctttgagaaaatatgttcagatacacactccctgtgtc
catatctatcaccctctgtattagtcagggttctctagagtcacagaact
tatggatagtctctaaatagtaaaggaatttattgatgacttacagtcgg
cagccgaattcccaacaattgttcagtcgcagctgtgaatggaagtccaa
ggatctagcagttactcagtctcacgcagcaagcaggcaaaggagcaaga
gcaagagctagactcccttcttccaatgtccttatattgtctccagcaga
aagtgtagcccagattaaaggtgtgttccttaaactcggagattcaatct
tctgggatccatagccactatggatcaagatcttcaaaccaagatccaga
taatgatctccaaacctccagatagagtcactggtgagccttccaattcc
ggattgtagttcattccaaatattgtcagttgacaccagatagccactac
accctctgagcaactcttgccacttgtactgaaccccttcctcaatttct
gcgatagagacccaatgaggttgtctggtgcagctgactacgtccttcaa
gtatttatgctgtctctccactaggcgaacgagagtctctgtcatattga
tcagtccagacacgctgtgctgccctattgcatcacctggagccttgggt
cgtttactgaactgcgtgcatccttagtggtggcgtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42971157_42972359
seq2: B6Ng01-137C15.b_48_1236 (reverse)

seq1  AAGACTTTCCACTCTGCTGACAGGATGCCCAATCTCCTTCCTTACCAATT  50
      |||||||| |||||   ||||| |||| |||||| | ||||||||  | |
seq2  AAGACTTT-CACTC--GTGACA-GATG-CCAATCCCTTTCCTTAC--AAT  43

seq1  ACCAATGAATATTTTATGTTGACATTTTAAAACCTC-ACACGTTGTACAT  99
      |||||||||| |||||| |||||||||  ||||||| |||||||||||||
seq2  ACCAATGAATTTTTTAT-TTGACATTT--AAACCTCAACACGTTGTACAT  90

seq1  ATCATTGACCTTTTTCATGTAACCACATGAACAAATACATATCTCACTTT  149
      |||||||||  |||||||||| |  |||||||||||||||||||||| ||
seq2  ATCATTGAC--TTTTCATGTACCACCATGAACAAATACATATCTCAC-TT  137

seq1  TACTTATGGTCATTTGCACTCAGTGCCTCCTCTGGCAGTATCTAAGTCCA  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTTATGGTCATTTGCACTCAGTG-CTCCTCTGGCAGTATCTAAGTCCA  186

seq1  TGTCATGGGAGATGTTTATAGGCCCCAATCAATCTCCTTTTCTGCTTCCC  249
      |||||| |||||||||||||||||||||||||||||||||  ||||||||
seq2  TGTCAT-GGAGATGTTTATAGGCCCCAATCAATCTCCTTTCTTGCTTCCC  235

seq1  TGACCAGTGTGTAGATTACTGAAGGACATGTAGCAAATAATCAAAGAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTGTGTAGATTACTGAAGGACATGTAGCAAATAATCAAAGAGTA  285

seq1  AGTTATGTCCAGATACAGCATGAATTATCATTTCATGTTGATGTATTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTCCAGATACAGCATGAATTATCATTTCATGTTGATGTATTATT  335

seq1  CCTAACATACTATGTGAATTATCATATATAGATTACATCAGCCTACAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATACTATGTGAATTATCATATATAGATTACATCAGCCTACAAAC  385

seq1  ACTAGCAACATGTCCACCTCTATAATATGGATAATTCAAATCCAGTGCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAACATGTCCACCTCTATAATATGGATAATTCAAATCCAGTGCTG  435

seq1  TTTTCTCTATTATTACTTATTTTAATAATTGTAAATTTATTTGAGATTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTATTATTACTTATTTTAATAATTGTAAATTTATTTGAGATTTA  485

seq1  TATAACACTTTTAAGCAGGGAACTCTGTTAGACTTGAGCATATAGGAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACACTTTTAAGCAGGGAACTCTGTTAGACTTGAGCATATAGGAGAA  535

seq1  ATAGTGACAGGATTTTAAACAATTATAAGGATACTGATGAAGCCTTGACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACAGGATTTTAAACAATTATAAGGATACTGATGAAGCCTTGACT  585

seq1  ACTGTACAGGGCTTGGTAGGAGCATGACAGTACAGAAGTCACACCCTCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAGGGCTTGGTAGGAGCATGACAGTACAGAAGTCACACCCTCCA  635

seq1  TGAGTGCACTTAGTAATGGCCAACTGGAGTGGAGGTTGTCCCAAAGCTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCACTTAGTAATGGCCAACTGGAGTGGAGGTTGTCCCAAAGCTGC  685

seq1  TGCTTGTCTGTGGGATATGTTCTAGATGGCCTGCTTTGTGGGAGAGAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCTGTGGGATATGTTCTAGATGGCCTGCTTTGTGGGAGAGAATG  735

seq1  GGTCTAGCCCAGCAGAGACTTGATTTGTCAGGCTTAGGGGATACCCAGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGCCCAGCAGAGACTTGATTTGTCAGGCTTAGGGGATACCCAGGG  785

seq1  GTGGTCTCCACTATGTCAGAGGAGAAGGGGAGGGAGAGGAGAAAAGGATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCCACTATGTCAGAGGAGAAGGGGAGGGAGAGGAGAAAAGGATT  835

seq1  GTGGGAGGTGGTGACCAGGAGGATGGGTAGTAAGGAGGATAGCAGGATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGGTGGTGACCAGGAGGATGGGTAGTAAGGAGGATAGCAGGATGT  885

seq1  AAAATGAATTTAAAAAAGAAGAAGAAGAACAGGGGCTTTTAAAGTATCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTTAAAAAAGAAGAAGAAGAACAGGGGCTTTTAAAGTATCTT  935

seq1  GAAATTACATTGTTATTAAAGTGCTATTAGTAATTTTTTTAAAGTGATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACATTGTTATTAAAGTGCTATTAGTAATTTTTTTAAAGTGATTT  985

seq1  TTGTTCACACAGAGCACATGACACTGTGCTTCTCTTCTTTCTTTCCTCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCACACAGAGCACATGACACTGTGCTTCTCTTCTTTCTTTCCTCCA  1035

seq1  ATGCTCTGAAATACATTCTTTGTTCCTTCTGTGTACAGCAGCCGGGGTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGAAATACATTCTTTGTTCCTTCTGTGTACAGCAGCCGGGGTGA  1085

seq1  TGCTCAGACTAGGCTTCTGTGCTGTACTAATGCTCTAGATTTGAGAGTAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGACTAGGCTTCTGTGCTGTACTAATGCTCTAGATTTGAGAGTAG  1135

seq1  AAGATTCTTCCCTTTCTTGTTAGTGCCACCATGAGCCCTGATTTCAATGA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTTCCCTTTCTTGTTAGTGCCACCATGAGCCCTGATTTCAATGA  1185

seq1  ATTC  1203
      ||||
seq2  ATTC  1189