BAC Information

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BAC

Clone NameB6Ng01-138B17
Chromosome2 (Build37)
Map Location 76,441,660 - 76,442,757
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6
Downstream genePrkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138B17.bB6Ng01-138B17.g
ACCDH937454DH937455
length1,2061,101
definitionDH937454|Mus musculus domesticus DNA, BAC clone: B6Ng01-138B17, 5' end.DH937455|Mus musculus domesticus DNA, BAC clone: B6Ng01-138B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttagcactggtccatgtggccgagatcaatattatcagtga
cagctcacgctagtgaggatgtggagtaaggggcacactcattcgttgct
ggtgggagtgtcagcttatacagccactatggaaatcagtgtggcacttc
ctcagggggatgggatttgacctacctcaagatccacctataccactctt
agatagatacccaaaggacacttcattctaccatagagtcacttgctcag
ccatgttcattgctgctctatttttaatagccagaagttggaaacaacct
agatgtctctcaacagaagaaccaataaagaactgtaaaattgtacacag
tagagtactactcaaaaaatgaaatcatgaaattcacaggcaaatggatg
gaattagaaatcatcctgagtgaggtatcccagacccagaaagacaaata
tggtatatattcacttactatgtggatattagctgttaagtcagtggtca
taaaactgcattccatagaagtattgaggttaagttagtgtaagggagta
gggggaacaaagagatcaccctaggaaagggaagtggaatagatcagtat
gggtggacatgggggctgaagcaggaactggaatggatggatcaaatccg
agataaagggagaagagacaaaaggggtaaaatgtggagagacagttaac
attatgaagcatcctaaaatatatacatatatgaaagcaatctaaatgat
accaccaaataatgtgggagatagagccccaactggacatctcttgtcac
caaatgaagcttccagtaccagaattgggttacatttaattgaattgttg
acttgagggggtcccatgggaaccaccgaatgaccctggctgttgccaag
actaaagtttgctctgtacaacctgacagcaaggccccattgctgcaaca
gcacttacacaactcactgacagaaattacatctggtgcttacatagagt
ttaagtccttgtgttggataggtttatgtcagcttgacaacgagctgggt
atctaaaaaggggaagaactttcaatgagaaatggcttccatagaatctg
gccaatattcttaatgatgaattgatgacacaggccaaacccatgtgggg
tggtacacatggccggggatccttaggtccttaaaaagacagtgtacaac
atcact
gaattccagattaagacagggggatctctgagttcaaggtcatctgggat
taaaggtgtgggggcacacacctttaatctgggccacaccctctgctgga
gacctacataaggacattggaagaaggaagatttactctctcttctccac
ctgcttgccttgtgggactgagaaactgctagatccttggacttccatcc
ataagctgctgctgaccattgttgggagttggactacagactgtaagtca
tcagcaaattcctttactatatagagactactcataagttctgtgactct
agagagcccttactagtatactgggtatatggaaatgcgttcccaggctg
ttccaagagttcaggagtaggagaaagacatcccctgtgagactgagttt
cccacaatctttatggagttcactcgtctttacttctaaaatctgggaaa
aaaaaaaaaaaagaagagttgaaggcagaccaccaagtcttttagtacaa
agaagtttagaattcaggaaaaggtctcacgctagcgtttgacttgagtg
tgcagtcactccaagaaaagagctggaaatacaaactaaatactcagtct
tccctagtgtagctgaaatctattgctgggagtgaaaatatccaatttag
tggcttagtgaacagcaattttgtgggggaaggtcatcagaatagcacac
aaatctctttatgtaatttatttcctgggccgttccaaatgtagcattct
tgtacacagccttgaggagatgtggttattttgagtatggagagacagac
attttttttcccctgtgaattatctttgttaggaaatctttattctattg
gaagtgattggcatttttttgtaacatatcttttccatctgaaggggcca
cataccctcctaacaaatattaattgaagccagaccaccaagtcttttcg
ataagtatgttttctttatgccttcagtttataagcacaattttagcctg
gagtttctttaaattaagaacccctttcaggaaggaagctctaattaagt
gaagaatgagactgtcactctatactctggaaatgttccactgggatatc
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76441660_76442757
seq2: B6Ng01-138B17.g_66_1166 (reverse)

seq1  TGATATCCCAGTGG-ACAATCTCAGAGTA-AGGTTGAACAG-CTCAATCT  47
      |||||||||||||| ||| |  ||||||| ||  || |||| |||| |||
seq2  TGATATCCCAGTGGAACATTTCCAGAGTATAGAGTG-ACAGTCTCATTCT  49

seq1  TCACTTAGAT-GAGCTTCCTCCCTGAAGGGGGTTCTT-ATTTAAAGAAAC  95
      |||||||  | ||||||||| |||||| ||||||||| ||||||||||||
seq2  TCACTTAATTAGAGCTTCCTTCCTGAAAGGGGTTCTTAATTTAAAGAAAC  99

seq1  TCCAGCCTAAAATTGTGCTTAT-AACTGAAGGCATAAAG-ATACATACTT  143
      ||||| |||||||||||||||| |||||||||||||||| | |||||| |
seq2  TCCAGGCTAAAATTGTGCTTATAAACTGAAGGCATAAAGAAAACATAC-T  148

seq1  TATACGAAAAGACTTGGTGGTCTGGCTTCAATT-ATATTTGTTA-GAGGG  191
      ||| ||||||||||||||||||||||||||||| |||||||||| |||||
seq2  TAT-CGAAAAGACTTGGTGGTCTGGCTTCAATTAATATTTGTTAGGAGGG  197

seq1  TATGTGGCCCCCTTCAGATTGGAAAGATATGTTACATACAAAATGCCAAT  241
      ||||||| ||||||||||| | |||||||||||||| | |||||||||||
seq2  TATGTGG-CCCCTTCAGATGGAAAAGATATGTTACA-AAAAAATGCCAAT  245

seq1  CAACTTCCAATAGAATAAAGATTTCCTAACAAAGATAATTCACAGGGGAA  291
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-ACTTCCAATAGAATAAAGATTTCCTAACAAAGATAATTCACAGGGGAA  294

seq1  AAAAAATGTCTGTCTCTCCATACTCAAAATAACCACATCTCCTCAAGGCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTCTGTCTCTCCATACTCAAAATAACCACATCTCCTCAAGGCT  344

seq1  GTGTACAAGAATGCTACATTTGGAACGGCCCAGGAAATAAATTACATAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAAGAATGCTACATTTGGAACGGCCCAGGAAATAAATTACATAAA  394

seq1  GAGATTTGTGTGCTATTCTGATGACCTTCCCCCACAAAATTGCTGTTCAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGTGTGCTATTCTGATGACCTTCCCCCACAAAATTGCTGTTCAC  444

seq1  TAAGCCACTAAATTGGATATTTTCACTCCCAGCAATAGATTTCAGCTACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACTAAATTGGATATTTTCACTCCCAGCAATAGATTTCAGCTACA  494

seq1  CTAGGGAAGACTGAGTATTTAGTTTGTATTTCCAGCTCTTTTCTTGGAGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAGACTGAGTATTTAGTTTGTATTTCCAGCTCTTTTCTTGGAGT  544

seq1  GACTGCACACTCAAGTCAAACGCTAGCGTGAGACCTTTTCCTGAATTCTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCACACTCAAGTCAAACGCTAGCGTGAGACCTTTTCCTGAATTCTA  594

seq1  AACTTCTTTGTACTAAAAGACTTGGTGGTCTGCCTTCAACTCTTCTTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTTGTACTAAAAGACTTGGTGGTCTGCCTTCAACTCTTCTTTTT  644

seq1  TTTTTTTTTTCCCAGATTTTAGAAGTAAAGACGAGTGAACTCCATAAAGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCCCAGATTTTAGAAGTAAAGACGAGTGAACTCCATAAAGA  694

seq1  TTGTGGGAAACTCAGTCTCACAGGGGATGTCTTTCTCCTACTCCTGAACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGAAACTCAGTCTCACAGGGGATGTCTTTCTCCTACTCCTGAACT  744

seq1  CTTGGAACAGCCTGGGAACGCATTTCCATATACCCAGTATACTAGTAAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAACAGCCTGGGAACGCATTTCCATATACCCAGTATACTAGTAAGG  794

seq1  GCTCTCTAGAGTCACAGAACTTATGAGTAGTCTCTATATAGTAAAGGAAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTAGAGTCACAGAACTTATGAGTAGTCTCTATATAGTAAAGGAAT  844

seq1  TTGCTGATGACTTACAGTCTGTAGTCCAACTCCCAACAATGGTCAGCAGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATGACTTACAGTCTGTAGTCCAACTCCCAACAATGGTCAGCAGC  894

seq1  AGCTTATGGATGGAAGTCCAAGGATCTAGCAGTTTCTCAGTCCCACAAGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATGGATGGAAGTCCAAGGATCTAGCAGTTTCTCAGTCCCACAAGG  944

seq1  CAAGCAGGTGGAGAAGAGAGAGTAAATCTTCCTTCTTCCAATGTCCTTAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGTGGAGAAGAGAGAGTAAATCTTCCTTCTTCCAATGTCCTTAT  994

seq1  GTAGGTCTCCAGCAGAGGGTGTGGCCCAGATTAAAGGTGTGTGCCCCCAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCTCCAGCAGAGGGTGTGGCCCAGATTAAAGGTGTGTGCCCCCAC  1044

seq1  ACCTTTAATCCCAGATGACCTTGAACTCAGAGATCCCCCTGTCTTAATCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAATCCCAGATGACCTTGAACTCAGAGATCCCCCTGTCTTAATCT  1094

seq1  GGAATTC  1098
      |||||||
seq2  GGAATTC  1101