BAC Information

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BAC

Clone NameB6Ng01-139O23
Chromosome2 (Build37)
Map Location 168,860,136 - 168,947,487
singlet/doubletdoublet
Overlap genenone
Upstream genePard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
Downstream geneEG668954, Tshz2, LOC100043737, LOC100043910, Zfp217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139O23.bB6Ng01-139O23.g
ACCDH938794DH938795
length1,094295
definitionDH938794|Mus musculus domesticus DNA, BAC clone: B6Ng01-139O23, 5' end.DH938795|Mus musculus domesticus DNA, BAC clone: B6Ng01-139O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(168,860,136 - 168,861,214)(168,947,193 - 168,947,487)
sequence
gaattcttctactttaatgagagtttctgggctcacagcactgctctgca
ttttgctttccttgtttagtataaatgcgatccaatttaatctgcatata
aacacacccattgcatattaaaatcaacatattataaacatcaggctgaa
cgctttcttgaagaagcaagcttaaaaaaatccatgcatattaatatcac
agataagccaattattatattgagtcataaataaaaaacaatatgattaa
tctaaatctggacgctccgtaaagccaaatgtatgatattccgattagcc
tgttttacaaacaatatcatgaacccttgcattttacatgtaatgtgttt
aaaattaatttcccagggcgatatcttattttgtctcacctatactaata
aggttcatgaaacattgatattacttaatatcacaatgcagagaggaagc
catttctctgcttttaattgaagctcagcttcggtttccatggccaccat
gaggatgtccaggtgtatagagttcttgatgacgtctccgaagaggacag
tgagatgctgaccttggtttgttaaacactcagcattccataccatgtga
tactaataacctatgtaacaaaggaacaatttttctgaccatttgctaca
cttcaagtcctctgcacagcaattatggaatttagtctttatattaacct
ggaagcttggtatcaccatcagtaccattacatgggaggaaaaatgagtt
tcaaaattattttctttcctttaaaaacgacttaaaagttttatttcttt
atatgtatgggctttttcccccttgcatgtatgtctgtgtaccgtgtgca
ctgcagtacccatagaggccagaagagggcaccgaatcagctgcccctgg
agtttcgatggcttttgtggctaatgtggtaggatagatgtctaggaatt
aaactttgggttcctcctggaaggagcagccagtgcttcctaaccctttg
aatccattttcttcattcccagggctggctttcccttcaagtcactgtta
caatgggacagagtcaatccagcactggttgggaaattccctcc
ctggaatttcacaggccagctaggctggcctacccagcagtgaacaagaa
gcccatctcaaacaaggcagggatgaggaccactaaccaagattatcttc
tcagacacacacacacacacacacacacacacacatacaacacaaacaca
caaagacaaacactagtcagcttttaaaggggagattttttttctttcaa
caattaattcctaaatttataatatatgatgctgtctcctgattgtgtag
gggaacagagggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_168860136_168861214
seq2: B6Ng01-139O23.b_47_1140

seq1  GAATTCTTCTACTTTAATGAGAGTTTCTGGGCTCACAGCACTGCTCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTACTTTAATGAGAGTTTCTGGGCTCACAGCACTGCTCTGCA  50

seq1  TTTTGCTTTCCTTGTTTAGTATAAATGCGATCCAATTTAATCTGCATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTCCTTGTTTAGTATAAATGCGATCCAATTTAATCTGCATATA  100

seq1  AACACACCCATTGCATATTAAAATCAACATATTATAAACATCAGGCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCCATTGCATATTAAAATCAACATATTATAAACATCAGGCTGAA  150

seq1  CGCTTTCTTGAAGAAGCAAGCTTAAAAAAATCCATGCATATTAATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCTTGAAGAAGCAAGCTTAAAAAAATCCATGCATATTAATATCAC  200

seq1  AGATAAGCCAATTATTATATTGAGTCATAAATAAAAAACAATATGATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGCCAATTATTATATTGAGTCATAAATAAAAAACAATATGATTAA  250

seq1  TCTAAATCTGGACGCTCCGTAAAGCCAAATGTATGATATTCCGATTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCTGGACGCTCCGTAAAGCCAAATGTATGATATTCCGATTAGCC  300

seq1  TGTTTTACAAACAATATCATGAACCCTTGCATTTTACATGTAATGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACAAACAATATCATGAACCCTTGCATTTTACATGTAATGTGTTT  350

seq1  AAAATTAATTTCCCAGGGCGATATCTTATTTTGTCTCACCTATACTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATTTCCCAGGGCGATATCTTATTTTGTCTCACCTATACTAATA  400

seq1  AGGTTCATGAAACATTGATATTACTTAATATCACAATGCAGAGAGGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATGAAACATTGATATTACTTAATATCACAATGCAGAGAGGAAGC  450

seq1  CATTTCTCTGCTTTTAATTGAAGCTCAGCTTCGGTTTCCATGGCCACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCTGCTTTTAATTGAAGCTCAGCTTCGGTTTCCATGGCCACCAT  500

seq1  GAGGATGTCCAGGTGTATAGAGTTCTTGATGACGTCTCCGAAGAGGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTCCAGGTGTATAGAGTTCTTGATGACGTCTCCGAAGAGGACAG  550

seq1  TGAGATGCTGACCTTGGTTTGTTAAACACTCAGCATTCCATACCATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGCTGACCTTGGTTTGTTAAACACTCAGCATTCCATACCATGTGA  600

seq1  TACTAATAACCTATGTAACAAAGGAACAATTTTTCTGACCATTTGCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATAACCTATGTAACAAAGGAACAATTTTTCTGACCATTTGCTACA  650

seq1  CTTCAAGTCCTCTGCACAGCAATTATGGAATTTAGTCTTTATATTAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTCCTCTGCACAGCAATTATGGAATTTAGTCTTTATATTAACCT  700

seq1  GGAAGCTTGGTATCACCATCAGTACCATTACATGGGAGGAAAAATGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTTGGTATCACCATCAGTACCATTACATGGGAGGAAAAATGAGTT  750

seq1  TCAAAATTATTTTCTTTCCTTTAAAAACGACTTAAAAGTTTTATTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTATTTTCTTTCCTTTAAAAACGACTTAAAAGTTTTATTTCTTT  800

seq1  ATATGTATGGGCTTTTTCCCCCTTGCATGTATGTCTGTGTACCGTGTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATGGGCTTTTTCCCCCTTGCATGTATGTCTGTGTACCGTGTGCA  850

seq1  CTGCAGTACCCATAGAGGCCAGAAGAGGGCACCGAATCAGCTGCCCCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTACCCATAGAGGCCAGAAGAGGGCACCGAATCAGCTGCCCCTGG  900

seq1  AGTTTCAGATGGC-TTTGT-GCCAATGT-GTA-GATAGATG-CTAGGAAT  945
      |||||| |||||| ||||| || ||||| ||| |||||||| ||||||||
seq2  AGTTTC-GATGGCTTTTGTGGCTAATGTGGTAGGATAGATGTCTAGGAAT  949

seq1  TAAACTT--GGGTCCT-CTGGAA-GAGCAGCCAGTGC-TCCTAA-CCTTT  989
      |||||||  || |||| |||||| ||||||||||||| |||||| |||||
seq2  TAAACTTTGGGTTCCTCCTGGAAGGAGCAGCCAGTGCTTCCTAACCCTTT  999

seq1  G-ATCCA-TCTCTCCATTCCCAGGGGCTGCTTTCCACTCAAGTCAACTGT  1037
      | ||||| | ||| |||||||||||   |||||||  ||||||| |||||
seq2  GAATCCATTTTCTTCATTCCCAGGGCTGGCTTTCCCTTCAAGTC-ACTGT  1048

seq1  TAC-ATGGGACAGTGTCAATCCAGCACT-GTTGGGAAAT--CCTCC  1079
      ||| ||||||||| |||||||||||||| ||||||||||  |||||
seq2  TACAATGGGACAGAGTCAATCCAGCACTGGTTGGGAAATTCCCTCC  1094

seq1: chr2_168947193_168947487
seq2: B6Ng01-139O23.g_75_369 (reverse)

seq1  CACACACACACACACACACACACACACACACATCCCTCTGTTCCCCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACATCCCTCTGTTCCCCTACA  50

seq1  CAATCAGGAGACAGCATCATATATTATAAATTTAGGAATTAATTGTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGAGACAGCATCATATATTATAAATTTAGGAATTAATTGTTGAA  100

seq1  AGAAAAAAAATCTCCCCTTTAAAAGCTGACTAGTGTTTGTCTTTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAATCTCCCCTTTAAAAGCTGACTAGTGTTTGTCTTTGTGTGT  150

seq1  TTGTGTTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAGAAGA  200

seq1  TAATCTTGGTTAGTGGTCCTCATCCCTGCCTTGTTTGAGATGGGCTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTGGTTAGTGGTCCTCATCCCTGCCTTGTTTGAGATGGGCTTCTT  250

seq1  GTTCACTGCTGGGTAGGCCAGCCTAGCTGGCCTGTGAAATTCCAG  295
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGCTGGGTAGGCCAGCCTAGCTGGCCTGTGAAATTCCAG  295