BAC Information

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BAC

Clone NameB6Ng01-140F01
Chromosome2 (Build37)
Map Location 47,316,129 - 47,317,216
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140F01.bB6Ng01-140F01.g
ACCDH939080DH939081
length1,0841,140
definitionDH939080|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F01, 5' end.DH939081|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatatctagacaaattaacaataaaatatcacaaaacccaatta
ctgtttaaagaatatagtgcaagttttagaacatgtttgatatagtatgt
acatataaataaaggccaataaatgtcaatgctcttttgcagataatgta
taaccctgtatcaaatgaggctagttattttaacatttgtgatatggagc
aatagttaaagcgcatttggggcttttacagaggacctgcactgagttcc
tatgatggcttcataactaactacccttaattacttccaggagatctgat
gtactcatattcctatgcacatttcaggtgtgtacatggtatatacatat
acatctatgaggcaaagcactcaaaattgtgaaatgaatacatctaaata
agtatttaaatgatgaaaaggcagacattgcaaaagctcttctggaaatt
ctaaaattcaattttgggttaaaagataaattttatttttaatttttttt
gaaatagctagttatttaaacatgattgagtatgagtacaagtcacttta
aacacttcaaagatacacttaaaacaatttacttctttaagttttttatg
aatcattccatttgtttatatctccaatgatatcacccttccaagttacc
actccacaaacaccctatcccacatctgctctctctgcctccactttgca
tccatgaaaactcctccatccacccaccctctcctgctccactgctccag
catcccctactctggggagtcaaacctccataggacccagatcctcccct
cccattgatgtcagacaaggccatcctctgctacatatgtgtctggagcc
atggatctctctctgtaaactccttggttggtggcctaatttctgggctc
gctgggtggttcagcaagagaacattgtttttcctgtagggttgcaatcc
tctctgcttccctcatttcttctgccagctcctccacaggttccctcagc
tcagtctgatgatgggctcaagcatccataactccactggtcagtctggc
agacctcccaaggatacccacagcaaatgactct
gaattccctgtcttccttctatcaaagctgacactcccgtccccactcct
actgccatacctattcccatgaatgcagccagggttaacgtaattggttc
tctttttgaccgccggccagcatagctttcttctaaactggatgcagggt
gataatatacgcggggtaacagctgtatcatgacacaaaaatcatgagat
gaattaaaaaccttagttgatacacagggagtaagtcctgtattgcaagc
ccaccatccaaccggggaagcttacctaactcgcccaggaggttttgggt
cccaatttcacagtcctcgagtgtttctgcagctaggagcaggtcatcta
catattgcagaagagtcacctgtgggttattggctcggaaaagagcaaga
tcttggtgtagggcttcatcgaacaaagtgggcgagttcttgaatccctg
aggcagcctcgtccatgtgagctgtccggcttgtccactctcggagtctc
gccattcgaaagcgaacaagggctggctgttggggtgtaacctcaaacag
aaaaaagcgtctttgagatccaggactgtgtaccatgtccgaccaggggg
caaggtgctgaggaggttataaggatttggcaccatggggtgtatgtcct
gcactctcttgttgacttctctaaggtcctggactggaaggtagtcactg
gtccctgggatttttactggaagtagaggagtgttccaaggggatttgca
tgggaccaaaatcccttgttggagcagtttgttaatttgggggcatatac
ccacttgagcttctctgctcatgggatattgtcagacccctataggggtg
gcctcggacttaagttcaatcaccacagggggggggaccaggtttggcat
ccccactcctcccatctctgcccacgcctgaggtatcgattcaacagttc
tgtatccctcggggggggctcttacttatttgtagtcgatattctctcta
gtgtaagacagctctagagtctgggtgctttatcctcagaacctcgatga
tggaaggtgaacgcattgtgcttactggtattatgttctcaattaggcag
acactgagtctgagaatgattccgatccctttgtacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47316129_47317216
seq2: B6Ng01-140F01.b_44_1127

seq1  GAATTCTATATCTAGACAAATTAACAATAAAATATCACAAAACCCAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATCTAGACAAATTAACAATAAAATATCACAAAACCCAATTA  50

seq1  CTGTTTAAAGAATATAGTGCAAGTTTTAGAACATGTTTGATATAGTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAAGAATATAGTGCAAGTTTTAGAACATGTTTGATATAGTATGT  100

seq1  ACATATAAATAAAGGCCAATAAATGTCAATGCTCTTTTGCAGATAATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAATAAAGGCCAATAAATGTCAATGCTCTTTTGCAGATAATGTA  150

seq1  TAACCCTGTATCAAATGAGGCTAGTTATTTTAACATTTGTGATATGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTGTATCAAATGAGGCTAGTTATTTTAACATTTGTGATATGGAGC  200

seq1  AATAGTTAAAGCGCATTTGGGGCTTTTACAGAGGACCTGCACTGAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTAAAGCGCATTTGGGGCTTTTACAGAGGACCTGCACTGAGTTCC  250

seq1  TATGATGGCTTCATAACTAACTACCCTTAATTACTTCCAGGAGATCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGGCTTCATAACTAACTACCCTTAATTACTTCCAGGAGATCTGAT  300

seq1  GTACTCATATTCCTATGCACATTTCAGGTGTGTACATGGTATATACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCATATTCCTATGCACATTTCAGGTGTGTACATGGTATATACATAT  350

seq1  ACATCTATGAGGCAAAGCACTCAAAATTGTGAAATGAATACATCTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATGAGGCAAAGCACTCAAAATTGTGAAATGAATACATCTAAATA  400

seq1  AGTATTTAAATGATGAAAAGGCAGACATTGCAAAAGCTCTTCTGGAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTAAATGATGAAAAGGCAGACATTGCAAAAGCTCTTCTGGAAATT  450

seq1  CTAAAATTCAATTTTGGGTTAAAAGATAAATTTTATTTTTAATTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTCAATTTTGGGTTAAAAGATAAATTTTATTTTTAATTTTTTTT  500

seq1  GAAATAGCTAGTTATTTAAACATGATTGAGTATGAGTACAAGTCACTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCTAGTTATTTAAACATGATTGAGTATGAGTACAAGTCACTTTA  550

seq1  AACACTTCAAAGATACACTTAAAACAATTTACTTCTTTAAGTTTTTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCAAAGATACACTTAAAACAATTTACTTCTTTAAGTTTTTTATG  600

seq1  AATCATTCCATTTGTTTATATCTCCAATGATATCACCCTTCCAAGTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTCCATTTGTTTATATCTCCAATGATATCACCCTTCCAAGTTACC  650

seq1  ACTCCACAAACACCCTATCCCACATCTGCTCTCTCTGCCTCCACTTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACAAACACCCTATCCCACATCTGCTCTCTCTGCCTCCACTTTGCA  700

seq1  TCCATGAAAACTCCTCCATCCACCCACCCTCTCCTGCTCCACTGCTCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAAAACTCCTCCATCCACCCACCCTCTCCTGCTCCACTGCTCCAG  750

seq1  CATCCCCTACTCTGGGGAGTCAAACCTCCATAGGACCCAGATCCTCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTACTCTGGGGAGTCAAACCTCCATAGGACCCAGATCCTCCCCT  800

seq1  CCCATTGATGTCAGACAAGGCCATCCTCTGCTACATATGTGTCTGGAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGATGTCAGACAAGGCCATCCTCTGCTACATATGTGTCTGGAGCC  850

seq1  ATGGATCCCTCTCTGTAAACTCCTTGGTTGGTGGCCTAATTTCTGGGCCC  900
      ||||||| |||||||||||||||||||||||||||||||||||||||| |
seq2  ATGGATCTCTCTCTGTAAACTCCTTGGTTGGTGGCCTAATTTCTGGGCTC  900

seq1  GCTGGGTGGTTCAGCAAGAGAACATTGTTTTTCCTGTAGGGTTGCAATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGGTTCAGCAAGAGAACATTGTTTTTCCTGTAGGGTTGCAATCC  950

seq1  CCTCTGC-TCCCTCATTCCTTCTGCCAGCTCCCCCACAGGGTCCCTCAGC  999
       |||||| ||||||||| |||||||||||||| ||||||| |||||||||
seq2  TCTCTGCTTCCCTCATTTCTTCTGCCAGCTCCTCCACAGGTTCCCTCAGC  1000

seq1  TCAGTCTGATGGTTGGCTCCAAGCATCCATAACTCCACTGGTCAGTTCCT  1049
      ||||||||||| | |||| |||||||||||||||||||||||||||  ||
seq2  TCAGTCTGATGATGGGCT-CAAGCATCCATAACTCCACTGGTCAGT--CT  1047

seq1  GGCAGAACCTCCCAAGGAATACCCACAGCAGATGACTCT  1088
      ||||| ||||||||||| |||||||||||| ||||||||
seq2  GGCAG-ACCTCCCAAGG-ATACCCACAGCAAATGACTCT  1084