BAC Information

Click to search

BAC

Clone NameB6Ng01-140I23
Chromosome2 (Build37)
Map Location 68,804,462 - 68,995,198
singlet/doubletdoublet
Overlap geneLass6, Nostrin
Upstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443
Downstream geneSpc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140I23.bB6Ng01-140I23.g
ACCDH939256DH939257
length712573
definitionDH939256|Mus musculus domesticus DNA, BAC clone: B6Ng01-140I23, 5' end.DH939257|Mus musculus domesticus DNA, BAC clone: B6Ng01-140I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,804,462 - 68,805,171)(68,994,620 - 68,995,198)
sequence
gaattctacttcttctgcagctgcctctctagtgttgaaaccaaccatgc
cgagctaagccatataggttaacaaagggaaaatgatggtgtgagtgtat
gctgatgagaataatacagcaaaggaaggggggactgaagggagagtaag
agagctgagttacctggtaggcaagcagggcagtgcagccatggtaacag
gaaggcaggctgcagggagataagcagtcacctcagtttctcctgattgc
ttcttttgtcccagggagatggcagagaggctcatcttggagactgaaag
ggagcaagaattttgaggatgaattggaaagtggaattctcctttgtaga
tatatttattagttgctttgtatggggtgtatgtgtccctgtggaggggg
cagggagtaacagtaaattgccatctctaggaataaggggtgttgtcact
tatgggttactctctctcaatccaaaaggaccaagggttgaatttgtttt
atgttcagtaacttttagtcccaggaatcaaatcagatactaatttaaaa
aataataacaaattttttaaaagacttagggttaggagggacctttccat
tataatttgtggggcacagtgagcggaaggctggacggaggctgtgcgtt
tctggagtggatactgatatggctttgatgttacacattttattggatca
gtttggaactgg
aaggccaaaaacatgctgtcccagagctaggtccctggctctcctataaa
ccttttaatgactctatcttagtctattgcttgacttcttcagacttatt
tttaatgataaagtagttgctccctactatttttttcactatattgccaa
cactgtgttaacaaacattattgtttattattattattattattattatt
aattattttcattataaatttctgagactcactattactgtagccttttg
ctctgtgggccatagacagaaatcttgctcatgtgtttatttctttagtc
cttttgagtcactgtctcaagctgttttggaaaatgctgtgtaatcaagt
ctgatcttgaactctctattcccctgcccccacaacccaagtgcagagat
ttacaggcacgcagcacggcccccagctttgtttttaaacacaggacctc
agtatatagtcctggttggcttgaaatttattagcctagaatgcatagaa
attcaccttcttctgcctcgtgaatttgtttggtttgtttgtttgtttgt
taggaatgttttattatgttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_68804462_68805171
seq2: B6Ng01-140I23.b_50_761

seq1  GAATTCTACTTCTTCTGCAGCTGCCTCTCTAGTGTTGAAACCAACCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTCTTCTGCAGCTGCCTCTCTAGTGTTGAAACCAACCATGC  50

seq1  CGAGCTAAGCCATATAGGTTAACAAAGGGAAAATGATGGTGTGAGTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTAAGCCATATAGGTTAACAAAGGGAAAATGATGGTGTGAGTGTAT  100

seq1  GCTGATGAGAATAATACAGCAAAGGAAGGGGGGACTGAAGGGAGAGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGAGAATAATACAGCAAAGGAAGGGGGGACTGAAGGGAGAGTAAG  150

seq1  AGAGCTGAGTTACCTGGTAGGCAAGCAGGGCAGTGCAGCCATGGTAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAGTTACCTGGTAGGCAAGCAGGGCAGTGCAGCCATGGTAACAG  200

seq1  GAAGGCAGGCTGCAGGGAGATAAGCAGTCACCTCAGTTTCTCCTGATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGGCTGCAGGGAGATAAGCAGTCACCTCAGTTTCTCCTGATTGC  250

seq1  TTCTTTTGTCCCAGGGAGATGGCAGAGAGGCTCATCTTGGAGACTGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTCCCAGGGAGATGGCAGAGAGGCTCATCTTGGAGACTGAAAG  300

seq1  GGAGCAAGAATTTTGAGGATGAATTGGAAAGTGGAATTCTCCTTTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAGAATTTTGAGGATGAATTGGAAAGTGGAATTCTCCTTTGTAGA  350

seq1  TATATTTATTAGTTGCTTTGTATGGGGTGTATGTGTCCCTGTGGAGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATTAGTTGCTTTGTATGGGGTGTATGTGTCCCTGTGGAGGGGG  400

seq1  CAGGGAGTAACAGTAAATTGCCATCTCTAGGAATAAGGGGTGTTGTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTAACAGTAAATTGCCATCTCTAGGAATAAGGGGTGTTGTCACT  450

seq1  TATGGGTTACTCTCTCTCAATCCAAAAGGACCAAGGGTTGAATTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTACTCTCTCTCAATCCAAAAGGACCAAGGGTTGAATTTGTTTT  500

seq1  ATGTTCAGTAACTTTTAGTCCCAGGAATCAAATCAGATACTAATTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGTAACTTTTAGTCCCAGGAATCAAATCAGATACTAATTTAAAA  550

seq1  AATAATAACAAA-TTTTTAAAAGACTTAGGGTTAGGAGGGACCTTTCCAT  599
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATAATAACAAATTTTTTAAAAGACTTAGGGTTAGGAGGGACCTTTCCAT  600

seq1  TATAATTTGTGGGGCACAGTGAGCGGAAGGCTGGACGGAGGCTGTGCGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTGTGGGGCACAGTGAGCGGAAGGCTGGACGGAGGCTGTGCGTT  650

seq1  TCTGGAGTGGATACTGATATGGCTTTGATGTTACACA-TTTATTGGATCA  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTGGAGTGGATACTGATATGGCTTTGATGTTACACATTTTATTGGATCA  700

seq1  GTTTGGAACTGG  710
      ||||||||||||
seq2  GTTTGGAACTGG  712

seq1: chr2_68994620_68995198
seq2: B6Ng01-140I23.g_67_645 (reverse)

seq1  CCCAACATAATAAAACATTCCTAACAAACAAACAAACAAACCAAACAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATAATAAAACATTCCTAACAAACAAACAAACAAACCAAACAAAT  50

seq1  TCACGAGGCAGAAGAAGGTGAATTTCTATGCATTCTAGGCTAATAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAGGCAGAAGAAGGTGAATTTCTATGCATTCTAGGCTAATAAATTT  100

seq1  CAAGCCAACCAGGACTATATACTGAGGTCCTGTGTTTAAAAACAAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAACCAGGACTATATACTGAGGTCCTGTGTTTAAAAACAAAGCTG  150

seq1  GGGGCCGTGCTGCGTGCCTGTAAATCTCTGCACTTGGGTTGTGGGGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCGTGCTGCGTGCCTGTAAATCTCTGCACTTGGGTTGTGGGGGCAG  200

seq1  GGGAATAGAGAGTTCAAGATCAGACTTGATTACACAGCATTTTCCAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAGAGAGTTCAAGATCAGACTTGATTACACAGCATTTTCCAAAAC  250

seq1  AGCTTGAGACAGTGACTCAAAAGGACTAAAGAAATAAACACATGAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGACAGTGACTCAAAAGGACTAAAGAAATAAACACATGAGCAAG  300

seq1  ATTTCTGTCTATGGCCCACAGAGCAAAAGGCTACAGTAATAGTGAGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTCTATGGCCCACAGAGCAAAAGGCTACAGTAATAGTGAGTCTC  350

seq1  AGAAATTTATAATGAAAATAATTAATAATAATAATAATAATAATAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTATAATGAAAATAATTAATAATAATAATAATAATAATAATAAA  400

seq1  CAATAATGTTTGTTAACACAGTGTTGGCAATATAGTGAAAAAAATAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGTTTGTTAACACAGTGTTGGCAATATAGTGAAAAAAATAGTAG  450

seq1  GGAGCAACTACTTTATCATTAAAAATAAGTCTGAAGAAGTCAAGCAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAACTACTTTATCATTAAAAATAAGTCTGAAGAAGTCAAGCAATAG  500

seq1  ACTAAGATAGAGTCATTAAAAGGTTTATAGGAGAGCCAGGGACCTAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATAGAGTCATTAAAAGGTTTATAGGAGAGCCAGGGACCTAGCTC  550

seq1  TGGGACAGCATGTTTTTGGCCTTGAATTC  579
      |||||||||||||||||||||||||||||
seq2  TGGGACAGCATGTTTTTGGCCTTGAATTC  579