BAC Information

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BAC

Clone NameB6Ng01-141E03
Chromosome2 (Build37)
Map Location 85,629,268 - 85,629,519
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015
Downstream geneOlfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141E03.bB6Ng01-141E03.g
ACCDH939760DH939761
length801252
definitionDH939760|Mus musculus domesticus DNA, BAC clone: B6Ng01-141E03, 5' end.DH939761|Mus musculus domesticus DNA, BAC clone: B6Ng01-141E03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaaaatacagcaaacca
acacccaatatcaaattaaatggagagatacttgaagaaatccccataaa
atcagggacgaaacaaggcttccccctctacctgtatctattcaatatgg
tacatgatggatgttcgagctagagcaataacacaacaaaaagtgatcaa
cgggatacaaattggcaaagaagtagtcaaggtatcactccttgcagatg
atatgatagtatgcataaatgacccaaaaatttttatgagagaacttcta
cagctgacaacttcagcaaagtggctggatataacataaactggaaaaat
cagtagccctcctttatacaaaagataaatggtcaagattcctcagttgt
gaaatggggtttagctctataccccatttttttattggaatgtttggggt
tttttgtttttgtttttgtgtgtgtgattaacttgtttatatattttaga
tattagccctttgttggatttggggttagtgaaaattttttttcccaatc
tttagcattctaatttgtcttcttgactgtcctttgcgttacagaagctt
tccagttccatgaggtcccatttatcaattcttgtttttagagcatgagc
cattagagttctgtttaggaaatgtctccctgtgccaatgagttcatggt
tcttttccaacttttctcattctataaattcagtgtatctggtttttcta
caaggtgacaaaaatttggtctattttcattctttacatacaacagccag
g
tcagttaatgcaactgagaagataatattggatggcaggcggaacagaaa
tgaagtattagatgaggtaattgagtagaaacaagaaaataaataatctc
attaaaaagggccaagcctagccttttctgatatgaaggggaaaagggta
gatggggaatgaggtgagagggaggggctgggaggacaggagagaaggaa
agctttgatctgtatataaagtaaataaataacttaatttataaaataga
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85629268_85629519
seq2: B6Ng01-141E03.g_73_324

seq1  TCAGTTAATGCAACTGAGAAGATAATATTGGATGGCAGGCGGAACAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATGCAACTGAGAAGATAATATTGGATGGCAGGCGGAACAGAAA  50

seq1  TGAAGTATTAGATGAGGTAATTGAGTAGAAACAAGAAAATAAATAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTATTAGATGAGGTAATTGAGTAGAAACAAGAAAATAAATAATCTC  100

seq1  ATTAAAAAGGGCCAAGCCTAGCCTTTTCTGATATGAAGGGGAAAAGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAGGGCCAAGCCTAGCCTTTTCTGATATGAAGGGGAAAAGGGTA  150

seq1  GATGGGGAATGAGGTGAGAGGGAGGGGCTGGGAGGACAGGAGAGAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGAATGAGGTGAGAGGGAGGGGCTGGGAGGACAGGAGAGAAGGAA  200

seq1  AGCTTTGATCTGTATATAAAGTAAATAAATAACTTAATAAATAAAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||  |||||| |||
seq2  AGCTTTGATCTGTATATAAAGTAAATAAATAACTTAATTTATAAAATAGA  250

seq1  GG  252
      ||
seq2  GG  252