BAC Information

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BAC

Clone NameB6Ng01-143B22
Chromosome2 (Build37)
Map Location 84,675,969 - 84,676,867
singlet/doubletsinglet
Overlap genenone
Upstream geneD430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10
Downstream geneSlc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143B22.bB6Ng01-143B22.g
ACCDH941140DH941141
length1,255894
definitionDH941140|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B22, 5' end.DH941141|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttgcggccgctaataggggtttgagggccaatggaacgaaaacgtacg
tttatggtataacttattgattataatacagtatacaaaggtcccttttc
agggaccctttcgtatgttgtagctgattttattttcttcttttcttttg
ggtgcttttaatagccatatatgatgtttcatataaagttaaaagtttcc
ccatctgtctatctatagcgtcatgtttttcaggatttcttaatttctgc
agcagtttagatatatatttcgcaggtaactttattattaatgaattatg
ggattgatacatttcctttgtccaatctaaatcttttcctgatttcaata
cctcactctcatctctattaattataaaaccgagctttccatacggacct
gttaaatatgattgtaattgtctatactcagatggacctaattcttcaaa
atttttagcatcaaaaacaacttgtcttgttttatagtcctccaatactc
gtttccaaaaatcagatttgccaccattggtgcctataatatctcgtctc
tgaactgcgttaccatttggatgggacttgatgtctgttaggtgggatgc
aaatactattcttagtgcgtctaaacaccattgttcaaattcagtggcac
cttcatttcctatcggtatctgatctagatgagtagttatttgacctatt
gttttatttctaatggctgaattatctgaaataatattaatatcatattc
gtcatttatctcctctgcttcctctggagcaagtgcattacgatttagat
tcaaaccaagccagtaacatggatgaattaataatttctcattactttca
aaacctttatctggagttcgcccgtcatggcaaaatgaataggatgaggt
gtttttatcacgaataccaacaaatcctacactatacaaactttggagaa
ttccaacttgttgatttttggccttaattcttggcaaattgagtcctgtg
tagaaagtctctctatactatactgttggcacatcatattttcttctaga
cgtttcagtgttcatgtattggtgattggagtattttatacaggtggaga
gataggtctagtcatccttctgtacgtggcatcagttttccaaccaattg
ctggaaggtccttttccagagtattggcataagtcaaaattaggggtaag
tgcaggattattcaattgtcccagactaatgtcgatctagagcgaaggag
cagag
gaattcttcataggaggcttccttctcttagggactgataaaggctgctg
agtctttcccttaaagctatctgcagacatcaacttacacattaccctta
aagaccatttcccgagctcctgactgggtccagctcccctcccggagtac
attccccagttatacactcctaccatggcccttgttcagcctccccaaac
ctcaggtgctctcctgaatagaatcttttttttttttaattttttattag
gtattttcctcatttacatttccaatgctatcccaaaagtcccctctacc
gccccccactcccctacccacccactccccctttttggccctggcgttac
cctgtactggggcatataaagtttgcaagtccaatgggcctctctttcca
gtgatggccgactaggccatcttttgatacatatgctgctagagtcaaga
gctccggggtactggttagttcatattgttgttccacctatagggttgca
gttctctttagctccttgggcactttctctagctcctccattgggggccc
tgtgatccatctgaatagaatctttaagatttatttatttgtatttttat
gtgtgttggttgagtgttttgccagcaggcatgaagtgtatacaccatat
gcatgcagagcctgtggatgccagaagaggacgctgagttccgtgaaact
agcatcacagaaagttgtgagcagctatgtgggtggatgggaacccaacc
caggtcctttgcaaaagcaacaactactcttaatggttgagccgtctttc
caccacatcccaccgctgtttgctggtctttgatttgctctgtggcctgg
cctagactagacttgcctctgcttcttgagtgcagtgtgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84675969_84676867
seq2: B6Ng01-143B22.g_65_958

seq1  GAATTCTTCATAGGAGGCTTCCTTCTCTTAGGGACTGATAAAGGCTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAGGAGGCTTCCTTCTCTTAGGGACTGATAAAGGCTGCTG  50

seq1  AGTCTTTCCCTTAAAGCTATCTGCAGACATCAACTTACACATTACCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCCCTTAAAGCTATCTGCAGACATCAACTTACACATTACCCTTA  100

seq1  AAGACCATTTCCCGAGCTCCTGACTGGGTCCAGCTCCCCTCCCGGAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATTTCCCGAGCTCCTGACTGGGTCCAGCTCCCCTCCCGGAGTAC  150

seq1  ATTCCCCAGTTATACACTCCTACCATGGCCCTTGTTCAGCCTCCCCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCAGTTATACACTCCTACCATGGCCCTTGTTCAGCCTCCCCAAAC  200

seq1  CTCAGGTGCTCTCCTGAATAGAATCTTTTTTTTTTTTAATTTTTTATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTGCTCTCCTGAATAGAATCTTTTTTTTTTTTAATTTTTTATTAG  250

seq1  GTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCTCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCTCTACC  300

seq1  GCCCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTAC  350

seq1  CCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA  400

seq1  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCTGCTAGAGTCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCTGCTAGAGTCAAGA  450

seq1  GCTCCGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCA  500

seq1  GTTCTCTTTAGCTCCTTGGGCACTTTCTCTAGCTCCTCCATTGGGGGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTAGCTCCTTGGGCACTTTCTCTAGCTCCTCCATTGGGGGCCC  550

seq1  TGTGATCCATCTGAATAGAATCTTTAAGATTTATTTATTTGTATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCATCTGAATAGAATCTTTAAGATTTATTTATTTGTATTTTTAT  600

seq1  GTGTGTTGGTTGAGTGTTTTGCCAGCAGGCATGAAGTGTATACACCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGGTTGAGTGTTTTGCCAGCAGGCATGAAGTGTATACACCATAT  650

seq1  GCATGCAGAGCCTGTGGATGCCAGAAGAGGACGCTGAGTTCCGTGAAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGAGCCTGTGGATGCCAGAAGAGGACGCTGAGTTCCGTGAAACT  700

seq1  AGCATCACAGAAAGTTGTGAGCAGCTATGTGGGTGGATGGGAACCCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACAGAAAGTTGTGAGCAGCTATGTGGGTGGATGGGAACCCAACC  750

seq1  CAGGTCCTCTGCAAAAGCAACAACTACTCTTAATGGTTGAGCCGTCTTTC  800
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTTGCAAAAGCAACAACTACTCTTAATGGTTGAGCCGTCTTTC  800

seq1  CACCACCATCCCACCCGCTGTTTGCTGGTCTTTGATTTGCTCTGTGGCCC  850
      ||||| ||||||| ||||||||||||||||||||||||||||||||| ||
seq2  CACCA-CATCCCA-CCGCTGTTTGCTGGTCTTTGATTTGCTCTGTGG-CC  847

seq1  TGGCCTAGAACTAGACTTGCCTCTGCTTCTTGAGTGCAGTGTGTGTGTG  899
      |||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  TGGCCTAG-ACTAGACTTGCCTCTGCTTCTTGAGTGCAGTGTGT-TGTG  894