BAC Information

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BAC

Clone NameB6Ng01-143G17
Chromosome2 (Build37)
Map Location 84,305,048 - 84,306,103
singlet/doubletsinglet
Overlap geneTfpi
Upstream geneZc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl
Downstream geneLOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143G17.bB6Ng01-143G17.g
ACCDH941359DH941360
length1,2471,049
definitionDH941359|Mus musculus domesticus DNA, BAC clone: B6Ng01-143G17, 5' end.DH941360|Mus musculus domesticus DNA, BAC clone: B6Ng01-143G17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgctcagctctgtaccccatttttaagtgggttatttggttt
tctggaatctaactccttgagttctttgtaaattttggatattagccctc
tatcagatgtaggattattaaagacattttccaaatctgcaagttgccat
tttgtcctattagtagtgccctttgacttacagaagtttttcagtttcat
gaggttccatttatcaattgttgatctcagagcctgaaccattgttatcc
tgttaagaaaattttaccctgtgttcaaggctatttcccactgtctctat
tagattccttgtatctggttttatgtggaggtccatgatccacttagact
tgagctttgtacaaggagataaaaatggatgaatttgcattcttctacat
gcagaccaccagttacaccagcactgtttgttaaaaatgcttttattttt
ctactgtatagttttggcttccttgtcaaagatcaagtgaaaataggtct
gtatgtgtttctatatcttcagttctgttttacttaactacctgcctgtc
tctgaaccaatactatgcagtttttgtcactattgctttgtagtacagct
tggggccaaggatggctattccccaagaagttcttttattgttgagaatt
ctttaactctcctgggtttttagttagtccatatgaaattgagaattgct
ctctctatctctgtgaagaattcagttgtaattttgatggggttgcattg
aatctgtagattccttttagtaagatggctatttttactattttaatcct
accgatccatgagcatgaaagatctttccatcgtccttttattttggttt
ttgatatttctttatttacatttcaaatgttatcctctttcccagtttat
tcctccagaactctatctcatcccttcttctctgctggggtgagggtttc
cccatcgaccaccattcccactccctgtcctggcattccctacactgggg
catcaggcttcacagcactaaggactcctcctcccattgatgccaacaag
gacatccctggctacatgctggagccatggtccctcatgtgtattcttgg
gttggggattagtcctggggactctggaggctggtgggtgtgatttcatc
ttcaggttcttctaactcgcagtgggaactagctcatcacaggtgtgtgc
gagatacactcctatattttgcgagcgcgtgagaaaccttcgaggta
gaattcttagattttctttgaattgggctgaaacttgattttctgtattt
attcgtatagattggtgggaaatatttttcactagtaaatgtaattgcta
ataaagcatagagtttaaattagaagaataaaacattttctcagttttaa
aaattataataataatcactgtgtaatttatattacctaatacattctac
ttacagcattagcacatcagagaaaccagattttatcctgttgtaacaga
tactgcctaggtttcttttgcaacaggcagtttaagatagtatttcaagg
gaaataaacagagacagaaataatacatttgttagttttatattttcctg
tgttaaaatttggtacctgttccatacatcttagttcttttaagagtgcc
gcagacaaatgtctttcgggatcccttctgcttcttcctcgccatctagg
cttttgatattggaatgtacataacgtacagcaagcatcagctcagcatg
cctgcctggttagttacacagcattaatatcaagatacagcagcttatca
ggcaggaaatccctctgaagacatcactaaaaaaaggtacaatgttatat
aggaaatgttttttgtgcttctagtatcattttttaaagttaacatttat
ctatatcttatagcaagagctccattttagctcaatttaattctatgtca
tcaagggagcctgatgctcgcatcttgctttaagcgatgaccatgtgcac
taggattgtggctcccagggaaattacaggagataaatgagccccggtgt
ggactcactgctctggggttatgtggcaacgtggcaggcctctcagtcat
gcttcttccctggaggattaccaaacgtttgcattcccacattgtatttt
ttcggaaatatccttttcctgagactacagccctgcttcccagacctctt
gctgaggcagcattcctacactagggatgcggcttgacgacctcaggggg
aaatatttgctaacatttctttaccgcacttagtatataaggttctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84305048_84306103
seq2: B6Ng01-143G17.g_66_1114 (reverse)

seq1  TCCAGAACATTTATAATAACTAAGTGCGGTAAATGAATTGTTAGCAATAT  50
      ||||||||  |||||   ||||||||||||||| ||| ||||||||| ||
seq2  TCCAGAAC-CTTATA--TACTAAGTGCGGTAAA-GAAATGTTAGCAA-AT  45

seq1  TTTCCCCCCTGAGGTCGTCAAGCCGCATTCCCTAGTGTAGGAATGGCTTG  100
       || ||||||||||||||||||||||| |||||||||||||||||   ||
seq2  ATTTCCCCCTGAGGTCGTCAAGCCGCA-TCCCTAGTGTAGGAATG--CTG  92

seq1  CCTCAGGAAGAGGTCTGTGAAGCAGGGCTGTAGTCTCAGGAAAAGAGTAT  150
      |||||| |||||||||| |||||||||||||||||||||||||||  || 
seq2  CCTCAGCAAGAGGTCTGGGAAGCAGGGCTGTAGTCTCAGGAAAAGGATA-  141

seq1  TTTCTGAAAAAATACATTGTGGGAATGCAAACGTTTGGGTAATCCTCCAG  200
      |||| ||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TTTCCGAAAAAATACAATGTGGGAATGCAAACGTTT-GGTAATCCTCCAG  190

seq1  GGAAG-AGCATGACTGAGAGG-CTG-CACGTTTGCCACAT-ACCACAGAG  246
      ||||| ||||||||||||||| ||| |||| ||||||||| ||| |||||
seq2  GGAAGAAGCATGACTGAGAGGCCTGCCACG-TTGCCACATAACCCCAGAG  239

seq1  CAGTGAGTCCACACGGGGCCTCATTTATCTCCTTGTAACTTCCCTGGGAG  296
      |||||||||||||| ||| ||||||||||||| ||||| |||||||||||
seq2  CAGTGAGTCCACACCGGGGCTCATTTATCTCC-TGTAATTTCCCTGGGAG  288

seq1  CCACATTCCTAGTGCACATGGTCATCGCTTAAAGCAAGATGCGAGCATCA  346
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATCCTAGTGCACATGGTCATCGCTTAAAGCAAGATGCGAGCATCA  338

seq1  GGCT-CCTTGATGACATAGAATTTAAATTGAGCT-AAATGGAGCTCTTGC  394
      |||| |||||||||||||||| |||||||||||| |||||||||||||||
seq2  GGCTCCCTTGATGACATAGAA-TTAAATTGAGCTAAAATGGAGCTCTTGC  387

seq1  TATAAGATATAGATAAATGTTAACTTTAAAAAATGATACTAGAAGCACAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATATAGATAAATGTTAACTTTAAAAAATGATACTAGAAGCACAA  437

seq1  AAAACATTTCCTATATAACATTGTACCTTTTTTTAGTGATGTCTTCAGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTCCTATATAACATTGTACCTTTTTTTAGTGATGTCTTCAGAG  487

seq1  GGATTTCCTGCCTGATAAGCTGCTGTATCTTGATATTAATGCTGTGTAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCCTGCCTGATAAGCTGCTGTATCTTGATATTAATGCTGTGTAAC  537

seq1  TAACCAGGCAGGCATGCTGAGCTGATGCTTGCTGTACGTTATGTACATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGGCAGGCATGCTGAGCTGATGCTTGCTGTACGTTATGTACATTC  587

seq1  CAATATCAAAAGCCTAGATGGCGAGGAAGAAGCAGAAGGGATCCCGAAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAAAAGCCTAGATGGCGAGGAAGAAGCAGAAGGGATCCCGAAAG  637

seq1  ACATTTGTCTGCGGCACTCTTAAAAGAACTAAGATGTATGGAACAGGTAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCTGCGGCACTCTTAAAAGAACTAAGATGTATGGAACAGGTAC  687

seq1  CAAATTTTAACACAGGAAAATATAAAACTAACAAATGTATTATTTCTGTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTAACACAGGAAAATATAAAACTAACAAATGTATTATTTCTGTC  737

seq1  TCTGTTTATTTCCCTTGAAATACTATCTTAAACTGCCTGTTGCAAAAGAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTATTTCCCTTGAAATACTATCTTAAACTGCCTGTTGCAAAAGAA  787

seq1  ACCTAGGCAGTATCTGTTACAACAGGATAAAATCTGGTTTCTCTGATGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGCAGTATCTGTTACAACAGGATAAAATCTGGTTTCTCTGATGTG  837

seq1  CTAATGCTGTAAGTAGAATGTATTAGGTAATATAAATTACACAGTGATTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTGTAAGTAGAATGTATTAGGTAATATAAATTACACAGTGATTA  887

seq1  TTATTATAATTTTTAAAACTGAGAAAATGTTTTATTCTTCTAATTTAAAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAATTTTTAAAACTGAGAAAATGTTTTATTCTTCTAATTTAAAC  937

seq1  TCTATGCTTTATTAGCAATTACATTTACTAGTGAAAAATATTTCCCACCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTTTATTAGCAATTACATTTACTAGTGAAAAATATTTCCCACCA  987

seq1  ATCTATACGAATAAATACAGAAAATCAAGTTTCAGCCCAATTCAAAGAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATACGAATAAATACAGAAAATCAAGTTTCAGCCCAATTCAAAGAAA  1037

seq1  ATCTAAGAATTC  1056
      ||||||||||||
seq2  ATCTAAGAATTC  1049