BAC Information

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BAC

Clone NameB6Ng01-143H15
Chromosome2 (Build37)
Map Location 91,281,308 - 91,424,299
singlet/doubletdoublet
Overlap gene1110051M20Rik, Lrp4, LOC619941, Ckap5
Upstream genePtprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289
Downstream geneF2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143H15.bB6Ng01-143H15.g
ACCDH941401DH941402
length229733
definitionDH941401|Mus musculus domesticus DNA, BAC clone: B6Ng01-143H15, 5' end.DH941402|Mus musculus domesticus DNA, BAC clone: B6Ng01-143H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,281,308 - 91,281,536)(91,423,706 - 91,424,299)
sequence
agttcatccactatgatggaaggttgttttcttcagaaatagtcaaaaac
tcaaatggaatccttagatagcaggtagaaaaatgcctagaggcaatcat
tataggtgtccctggaacctatacccaaaccctaaagagaggttctaaac
ggacttcagaggagtactcagctgtagctttggtgtttgttttggtttgt
tttggtttggttttttggtgtgtgtgtaa
gaattcactctgcaggctggctggggactcagagttttaaaggatgtgtg
ccaccacatccagcctcatgtagctaatttttaattactaacaagctgag
aattttcaccatgagtattatattttaacaaatgactatttaaaaatcag
ttgatacaatcacatgaagtttcttctatagtctgttggcacaaaggaat
acattgatttctgaatgctgaactctatttttataatctgattaaaatct
gatttgccatttaagggctcaaaaaaaaaaaaaaaaaaaaaaacccaaac
agaaaactatatactatgcaaacacacaaaaaagggaatcctttaagaag
ttttttgtttaacaaaaagaaaaaaaagagcagggcagtggtagcgcacg
cctttaatcccagcacttgggaggctgaggcaggaggatttctgagtttg
aagccagcctggtctacagaataagttccaggacatccagggctacacag
agaaaccctgtctcgaaataccaaaaaaaaaaaaaaaaaaaaaaaaaaga
aaaaaagaaaagaaaagaagagagagagaaaagtaggttttttttgtttt
tctattttcttaaaaggaaaataatcattttgtttcatgggggtaagaca
acagtcaattatagtggagacattctgggcagcagaaaacttgagacaaa
tgatcacattttatcctaaggaaagaaaacaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91281308_91281536
seq2: B6Ng01-143H15.b_53_281

seq1  AGTTCATCCACTATGATGGAAGGTTGTTTTCTTCAGAAATAGTCAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATCCACTATGATGGAAGGTTGTTTTCTTCAGAAATAGTCAAAAAC  50

seq1  TCAAATGGAATCCTTAGATAGCAGGTAGAAAAATGCCTAGAGGCAATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGAATCCTTAGATAGCAGGTAGAAAAATGCCTAGAGGCAATCAT  100

seq1  TATAGGTGTCCCTGGAACCTATACCCAAACCCTAAAGAGAGGTTCTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGTCCCTGGAACCTATACCCAAACCCTAAAGAGAGGTTCTAAAC  150

seq1  GGACTTCAGAGGAGTACTCAGCTGTAGCTTTGGTGTTTGTTTTGGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAGAGGAGTACTCAGCTGTAGCTTTGGTGTTTGTTTTGGTTTGT  200

seq1  TTTGGTTTGGTTTTTTGGTGTGTGTGTAA  229
      |||||||||||||||||||||||||||||
seq2  TTTGGTTTGGTTTTTTGGTGTGTGTGTAA  229

seq1: chr2_91423706_91424299
seq2: B6Ng01-143H15.g_66_659 (reverse)

seq1  AAAAAAACCTACTTTTCTCTCTCTCTTCTTTTCTTTTCTTTTTTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCTACTTTTCTCTCTCTCTTCTTTTCTTTTCTTTTTTTCTTTT  50

seq1  TTTTTTTTTTTTTTTTTTTTTTGGTATTTCGAGACAGGGTTTCTCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTGGTATTTCGAGACAGGGTTTCTCTGTGT  100

seq1  AGCCCTGGATGTCCTGGAACTTATTCTGTAGACCAGGCTGGCTTCAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGATGTCCTGGAACTTATTCTGTAGACCAGGCTGGCTTCAAACT  150

seq1  CAGAAATCCTCCTGCCTCAGCCTCCCAAGTGCTGGGATTAAAGGCGTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCCTCCTGCCTCAGCCTCCCAAGTGCTGGGATTAAAGGCGTGCG  200

seq1  CTACCACTGCCCTGCTCTTTTTTTTCTTTTTGTTAAACAAAAAACTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACTGCCCTGCTCTTTTTTTTCTTTTTGTTAAACAAAAAACTTCTT  250

seq1  AAAGGATTCCCTTTTTTGTGTGTTTGCATAGTATATAGTTTTCTGTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTCCCTTTTTTGTGTGTTTGCATAGTATATAGTTTTCTGTTTGG  300

seq1  GTTTTTTTTTTTTTTTTTTTTTTTGAGCCCTTAAATGGCAAATCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTTTTTTTTTTGAGCCCTTAAATGGCAAATCAGATTT  350

seq1  TAATCAGATTATAAAAATAGAGTTCAGCATTCAGAAATCAATGTATTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGATTATAAAAATAGAGTTCAGCATTCAGAAATCAATGTATTCCT  400

seq1  TTGTGCCAACAGACTATAGAAGAAACTTCATGTGATTGTATCAACTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCAACAGACTATAGAAGAAACTTCATGTGATTGTATCAACTGATT  450

seq1  TTTAAATAGTCATTTGTTAAAATATAATACTCATGGTGAAAATTCTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGTCATTTGTTAAAATATAATACTCATGGTGAAAATTCTCAGC  500

seq1  TTGTTAGTAATTAAAAATTAGCTACATGAGGCTGGATGTGGTGGCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTAATTAAAAATTAGCTACATGAGGCTGGATGTGGTGGCACACA  550

seq1  TCCTTTAAAACTCTGAGTCCCCAGCCAGCCTGCAGAGTGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAACTCTGAGTCCCCAGCCAGCCTGCAGAGTGAATTC  594