BAC Information

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BAC

Clone NameB6Ng01-143M12
Chromosome2 (Build37)
Map Location 172,604,895 - 172,734,426
singlet/doubletdoublet
Overlap geneBmp7
Upstream geneLOC100043744, Cbln4, Mc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750
Downstream geneLOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143M12.bB6Ng01-143M12.g
ACCDH941629DH941630
length1671,057
definitionDH941629|Mus musculus domesticus DNA, BAC clone: B6Ng01-143M12, 5' end.DH941630|Mus musculus domesticus DNA, BAC clone: B6Ng01-143M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(172,604,895 - 172,605,061)(172,733,353 - 172,734,426)
sequence
ctccctgcctggattgctcagtgggtagctagaattcctccagctagtgc
tcctaggaggaaagatgttgagtcaggtgactgacagtcagagaatctga
aagccagctgtcaggtcctgttttaaagtcatctcccctccctccctccc
tccctccctccctccct
gaattctgaatggcagctgcagaggctttctgcaggagtgaaatctaagg
cacacagtaggcactcagagaatgcctactgtgggaatagtctggtctct
tgctgtagggcaagggcctcttgcgtgggggtgttgagggccatggggac
atgcccacaggtacctactacatgcactggtgccagggcatctgcttgtg
gatggatggtccacctagcatgcctgccaactgccttgttttcaatctta
cctcagcatctgcgctcaatttctaaaaagcgaaaattgcctaccattat
cccgcgctccattctccgagagctttgctgtgatgattgtaattatatta
cgcagagctgggggctgccccggtgtccagggttggtgggctcttattga
cagggggatggcagcaggtgctggggccctgggttcttgatgttggactg
catctggggacagtgggctgtaggatccggtctgtctggataagttgatc
agacaccttaattccgaaagcactccgttcttggattgtgacctctgctt
gcctataggaacctatttttccaaatgtattaacatatgtgtttcatatc
agggcctgtaagtgcttttagccttcttggcaggaaacaacgggaatcga
tatttttcactttgcttgtaagcggtcagctgtaggcgggataacaaatg
ccttctcggacgctaatgctgtgagacctggggaaacaggtgttgtttcc
aagtgacccaccatttccacataggcctccgctgtcttaaacccgggtca
gaagcagcgagcgtgcaaggcttcttcgagctctggtttcttccttcctc
ttcctactcccaccccatgggtgccccttctttctctgggctgactaatg
gatcacagcactgcttcctgcatcctcagtgcagctgtgtgaagagagag
agagacgcagcactgctgacagtgagctgctagtgaggaagcttgcgggc
ctggcctcagtcaggtttctcaggcactgtgaggtgcatgcatgcatttg
ggcgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_172604895_172605061
seq2: B6Ng01-143M12.b_55_221

seq1  CTCCCTGCCTGGATTGCTCAGTGGGTAGCTAGAATTCCTCCAGCTAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCCTGGATTGCTCAGTGGGTAGCTAGAATTCCTCCAGCTAGTGC  50

seq1  TCCTAGGAGGAAAGATGTTGAGTCAGGTGACTGACAGTCAGAGAATCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGAGGAAAGATGTTGAGTCAGGTGACTGACAGTCAGAGAATCTGA  100

seq1  AAGCCAGCTGTCAGGTCCTGTTTTAAAGTCATCTCCCCTCCCTCCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCTGTCAGGTCCTGTTTTAAAGTCATCTCCCCTCCCTCCCTCCC  150

seq1  TCCCTCCCTCCCTCCCT  167
      |||||||||||||||||
seq2  TCCCTCCCTCCCTCCCT  167

seq1: chr2_172733353_172734426
seq2: B6Ng01-143M12.g_70_1126 (reverse)

seq1  GCACGCACAAATGCATGCATGCACACTTCACAGTTGGCCTGGAGAAACCT  50
      |||||| ||||||||||||||  ||| |||||||  |||| |||||||||
seq2  GCACGCCCAAATGCATGCATG--CACCTCACAGT--GCCT-GAGAAACCT  45

seq1  CGACCTGAGGCCAGGGCCCCGCAGGCTTCCCTCACTAGCAGCTTCACTTG  100
       || |||||||||||  |||||| |||| ||||||||||||| |||||  
seq2  -GA-CTGAGGCCAGG--CCCGCAAGCTT-CCTCACTAGCAGC-TCACT--  87

seq1  GTCAGCAGTGGCTGCGTCTCTCTCTCTCTTCACACAGCTGCACTGAGGAC  150
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  GTCAGCAGT-GCTGCGTCTCTCTCTCTCTTCACACAGCTGCACTGAGGA-  135

seq1  TGCAGGAAGCAGTGCTGTGATCCATTAGTCAGCCCAAGAGAAAGAAGGGG  200
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  TGCAGGAAGCAGTGCTGTGATCCATTAGTCAGCCC-AGAGAAAGAA-GGG  183

seq1  GCACCCATGGGGGTGGGAGTAGGAAGAGGAAGGAAGAAACCAGAGCTCGA  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCAT-GGGGTGGGAGTAGGAAGAGGAAGGAAGAAACCAGAGCTCGA  232

seq1  AGAAGCCTTGCACGCTCGCTGCTTCTGACCCGGGTTTAAGACAGCGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTTGCACGCTCGCTGCTTCTGACCCGGGTTTAAGACAGCGGAGG  282

seq1  CCTATGTGGAAATGGTGGGTCACTTGGAAACAACACCTGTTTCCCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTGGAAATGGTGGGTCACTTGGAAACAACACCTGTTTCCCCAGGT  332

seq1  CTCACAGCATTAGCGTCCGAGAAGGCATTTGTTATCCCGCCTACAGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGCATTAGCGTCCGAGAAGGCATTTGTTATCCCGCCTACAGCTGA  382

seq1  CCGCTTACAAGCAAAGTGAAAAATATCGATTCCCGTTGTTTCCTGCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTTACAAGCAAAGTGAAAAATATCGATTCCCGTTGTTTCCTGCCAAG  432

seq1  AAGGCT-AAAGCACTTACAGGCCCTGATATGAAACACATATGTTAATACA  499
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAAAAGCACTTACAGGCCCTGATATGAAACACATATGTTAATACA  482

seq1  TTTGGAAAAATAGGTTCCTATAGGCAAGCAGAGGTCACAATCCAAGAACG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAATAGGTTCCTATAGGCAAGCAGAGGTCACAATCCAAGAACG  532

seq1  GAGTGCTTTCGGAATTAAGGTGTCTGATCAACTTATCCAGACAGACCGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTTTCGGAATTAAGGTGTCTGATCAACTTATCCAGACAGACCGGA  582

seq1  TCCTACAGCCCACTGTCCCCAGATGCAGTCCAACATCAAGAACCCAGGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAGCCCACTGTCCCCAGATGCAGTCCAACATCAAGAACCCAGGGC  632

seq1  CCCAGCACCTGCTGCCATCCCCCTGTCAATAAGAGCCCACCAACCCTGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACCTGCTGCCATCCCCCTGTCAATAAGAGCCCACCAACCCTGGA  682

seq1  CACCGGGGCAGCCCCCAGCTCTGCGTAATATAATTACAATCATCACAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGGGGCAGCCCCCAGCTCTGCGTAATATAATTACAATCATCACAGCA  732

seq1  AAGCTCTCGGAGAATGGAGCGCGGGATAATGGTAGGCAATTTTCGCTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCGGAGAATGGAGCGCGGGATAATGGTAGGCAATTTTCGCTTTT  782

seq1  TAGAAATTGAGCGCAGATGCTGAGGTAAGATTGAAAACAAGGCAGTTGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTGAGCGCAGATGCTGAGGTAAGATTGAAAACAAGGCAGTTGGC  832

seq1  AGGCATGCTAGGTGGACCATCCATCCACAAGCAGATGCCCTGGCACCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCTAGGTGGACCATCCATCCACAAGCAGATGCCCTGGCACCAGT  882

seq1  GCATGTAGTAGGTACCTGTGGGCATGTCCCCATGGCCCTCAACACCCCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAGTAGGTACCTGTGGGCATGTCCCCATGGCCCTCAACACCCCCA  932

seq1  CGCAAGAGGCCCTTGCCCTACAGCAAGAGACCAGACTATTCCCACAGTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGAGGCCCTTGCCCTACAGCAAGAGACCAGACTATTCCCACAGTAG  982

seq1  GCATTCTCTGAGTGCCTACTGTGTGCCTTAGATTTCACTCCTGCAGAAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTCTGAGTGCCTACTGTGTGCCTTAGATTTCACTCCTGCAGAAAG  1032

seq1  CCTCTGCAGCTGCCATTCAGAATTC  1074
      |||||||||||||||||||||||||
seq2  CCTCTGCAGCTGCCATTCAGAATTC  1057