BAC Information

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BAC

Clone NameB6Ng01-146K13
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,691 - 142,777,69829,582,814 - 29,583,993
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146K13.bB6Ng01-146K13.g
ACCDH943739DH943740
length9301,142
definitionDH943739|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K13, 5' end.DH943740|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,691 - 142,777,698)(29,582,814 - 29,583,993)
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctc
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaattttccccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttctttgat
ccatttagatttgaccttagtacaaggagataagtatggattgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggctttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
taaaatgttgattctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcaggacttgaagttttatcctacag
atctttcacttccttagttagagtcactcc
gaattcattattagaacaatgttcttgtaagtagaaattaaagcctttga
aagtccttaaatctcaaacatgtattctatacacaaatgatcacagcttg
agtaaatgtctacaaggagtgtggaagctgtaagaaacagtagcagaggc
aactacctgggattggtatcctctgatgtcctgttttgtaggtcatttgt
cttgggaaagaggggcagttattaaaataaataaataaataaataaataa
ataaataaataaataaataacagattgtcaaatgtttataaatgtcctca
agcagatgcctgtcagggaaaattccagagaatgcttcaggaaaaagatt
gttctcgtagagattgctcttcccattgctatatgtcctacttggcccac
tactgatccatcttcctaatagtagaagcagaaacagaaactaaggctcc
agttccaaggctccatcctgtgcctcttgtaagatgagtgggagatgata
tagccctggtcccacgcagctgattttcacaggcaaaatccacatagcaa
ctagccctaatgccacagtttgcaaggatagagatacaatcgtgttcctt
tcctcatttcaagccagtgcttctgctcttgggttctgctcaatctttct
tggggattgagatttatagctacgataagggaagactttatgaatactta
ggaaatgtttccagctatgtttgagtttatagtaagttgataaaaaattc
ggaaaagccaggcagtggtggcgcatgtctttaatcccagcacttaggag
gcagaggcaggttggatttctgaattcaaggccagcctggtctacagagt
gaattccaggacagagaaattctgtctcaaataacccaaaaaaaaaaaaa
aaaataaaggacccaaaacgaaaaaacaaccaaaaaccacctaaaaccaa
aaccaaaacaaacaaaacgagagacatacaaaaacaaaacacactcacaa
atcaaagaccttcagaacaaggaatctattatggcttcgagtttctcttt
gcaactttcatttgaatccttatcatagaactctagttccaggttcagcc
ttaccttgaacctttttatcccttctctagatgcttaaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777698
seq2: B6Ng01-146K13.b_43_589 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCTAAAGCCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATCAATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGGAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAGAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGA  550
      ||||||||||||||| |||||||||||||| ||            ||| |
seq2  TCAAATAACCCCATT-AAAAATGGGGCTCAGAA----------CTGAACA  539

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  600
      ||||    |||                                       
seq2  AAGA----ATTC--------------------------------------  547

seq1  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  650
                                                        
seq2  --------------------------------------------------  547

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  700
                                                        
seq2  --------------------------------------------------  547

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  750
                                                        
seq2  --------------------------------------------------  547

seq1  CTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  800
                                                        
seq2  --------------------------------------------------  547

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATA  850
                                                        
seq2  --------------------------------------------------  547

seq1  AGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAA  900
                                                        
seq2  --------------------------------------------------  547

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  950
                                                        
seq2  --------------------------------------------------  547

seq1  CCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACA  1000
                                                        
seq2  --------------------------------------------------  547

seq1  AAGAATTC  1008
              
seq2  --------  547

seq1: chr10_29582814_29583993
seq2: B6Ng01-146K13.g_69_1210 (reverse)

seq1  TTGTTTAAGCATCTTTAGAGTATGGGTATAAAGATGCTCAGTGTACAGCT  50
      |||||||||||||  ||||| |  || ||||| | | |||  |||  |||
seq2  TTGTTTAAGCATC--TAGAGAA--GGGATAAAAAGGTTCAAGGTAAGGCT  46

seq1  GATACTGTGAAACTAGAGTTCTATGATAAGATTTAGAATGGAAAGCTGCA  100
      ||  |  || ||||||||||||||||||||  ||  ||| ||||| ||| 
seq2  GAACC--TGGAACTAGAGTTCTATGATAAGGATTCAAAT-GAAAGTTGC-  92

seq1  AAAAGAGAAACTTTGAAGCCATAATAGATTTCCTTGTTCTGAAGGTCTTT  150
       |||||||||| | |||||||||||||| ||||||||||||||||||  |
seq2  -AAAGAGAAAC-TCGAAGCCATAATAGA-TTCCTTGTTCTGAAGGTC--T  137

seq1  TTGATTTTTGTTGTTGTTGTTGTTTTTGTTTTTTGTTTTTGTCTCTTTGT  200
      |||||        ||||   ||| |||  ||||||| | | |||| || |
seq2  TTGAT--------TTGTGAGTGTGTTTTGTTTTTGTATGTCTCTCGTT-T  178

seq1  TTTTTGTTTTGTTTTTGGTTTTTGGTTTTTGGTTGGTTTTTTGTTTTGTT  250
      | ||||||||| |||||||||| ||        |||||||| |||    |
seq2  TGTTTGTTTTGGTTTTGGTTTTAGG--------TGGTTTTTGGTT---GT  217

seq1  TTTTTTGTTTTTGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTT  300
      ||||| ||||| ||| |      ||| ||||||||||||||||| |||| 
seq2  TTTTTCGTTTTGGGTCC------TTTATTTTTTTTTTTTTTTTTGGGTTA  261

seq1  TTTGAGACAGAATTTCTCTGTCCTGGAATTCACTCTGTAGACCAGGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGAATTTCTCTGTCCTGGAATTCACTCTGTAGACCAGGCTGG  311

seq1  CCTTGAATTCAGAAATCC-ACCTGCCTCTGCCTCCTAAGTGCTGGGATTA  399
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTTGAATTCAGAAATCCAACCTGCCTCTGCCTCCTAAGTGCTGGGATTA  361

seq1  AAGACATGCGCCACCACTGCCTGGCTTTTCCGAATTTTTTATCAACTTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGCGCCACCACTGCCTGGCTTTTCCGAATTTTTTATCAACTTAC  411

seq1  TATAAACTCAAACATAGCTGGAAACATTTCCTAAGTATTCATAAAGTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTCAAACATAGCTGGAAACATTTCCTAAGTATTCATAAAGTCTT  461

seq1  CCCTTATCGTAGCTATAAATCTCAATCCCCAAGAAAGATTGAGCAGAACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCGTAGCTATAAATCTCAATCCCCAAGAAAGATTGAGCAGAACC  511

seq1  CAAGAGCAGAAGCACTGGCTTGAAATGAGGAAAGGAACACGATTGTATCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCAGAAGCACTGGCTTGAAATGAGGAAAGGAACACGATTGTATCT  561

seq1  CTATCCTTGCAAACTGTGGCATTAGGGCTAGTTGCTATGTGGATTTTGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTGCAAACTGTGGCATTAGGGCTAGTTGCTATGTGGATTTTGCC  611

seq1  TGTGAAAATCAGCTGCGTGGGACCAGGGCTATATCATCTCCCACTCATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATCAGCTGCGTGGGACCAGGGCTATATCATCTCCCACTCATCT  661

seq1  TACAAGAGGCACAGGATGGAGCCTTGGAACTGGAGCCTTAGTTTCTGTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAGGCACAGGATGGAGCCTTGGAACTGGAGCCTTAGTTTCTGTTT  711

seq1  CTGCTTCTACTATTAGGAAGATGGATCAGTAGTGGGCCAAGTAGGACATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTACTATTAGGAAGATGGATCAGTAGTGGGCCAAGTAGGACATA  761

seq1  TAGCAATGGGAAGAGCAATCTCTACGAGAACAATCTTTTTCCTGAAGCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGGGAAGAGCAATCTCTACGAGAACAATCTTTTTCCTGAAGCAT  811

seq1  TCTCTGGAATTTTCCCTGACAGGCATCTGCTTGAGGACATTTATAAACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAATTTTCCCTGACAGGCATCTGCTTGAGGACATTTATAAACAT  861

seq1  TTGACAATCTGTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAATCTGTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  911

seq1  TTTATTTTAATAACTGCCCCTCTTTCCCAAGACAAATGACCTACAAAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAATAACTGCCCCTCTTTCCCAAGACAAATGACCTACAAAACA  961

seq1  GGACATCAGAGGATACCAATCCCAGGTAGTTGCCTCTGCTACTGTTTCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGAGGATACCAATCCCAGGTAGTTGCCTCTGCTACTGTTTCTT  1011

seq1  ACAGCTTCCACACTCCTTGTAGACATTTACTCAAGCTGTGATCATTTGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCCACACTCCTTGTAGACATTTACTCAAGCTGTGATCATTTGTG  1061

seq1  TATAGAATACATGTTTGAGATTTAAGGACTTTCAAAGGCTTTAATTTCTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATACATGTTTGAGATTTAAGGACTTTCAAAGGCTTTAATTTCTA  1111

seq1  CTTACAAGAACATTGTTCTAATAATGAATTC  1180
      |||||||||||||||||||||||||||||||
seq2  CTTACAAGAACATTGTTCTAATAATGAATTC  1142