BAC Information

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BAC

Clone NameB6Ng01-147E24
Chromosome2 (Build37)
Map Location 142,776,681 - 142,777,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147E24.bB6Ng01-147E24.g
ACCDH944229DH944230
length1,0331,167
definitionDH944229|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E24, 5' end.DH944230|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acattttttgtatccattcctctgttgagggacatctgggttcttaccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
tccttcttaccggttgggacatcttctggatatatgcccaggagaggtat
tgcgggatcctccggtagtactatgtccaattttctgaggaaccgccaga
ctgatttccagagtggttgtacaagcttgcaatcccaccaacaatggagg
agtgttcctctttctccacatcctcgccagcatctgctgtcacctgaatt
tttgatcttagctattctgactcgtgtgagatggaatctcagggttgttt
tgatttgcatttctctgatgattaaggatgttgaacatttttcaggtgtt
tctcagcctttcggtattcctcgggtgagaattctttgttcagttctgag
ccccatcttttaagggggttatttgattttctggagtccaccctcttgag
ttctttatatatattggatattagtcccctatctgatttaagataggtaa
agatcctttcccaatctgttggtggtctttttgtcttattgacgatgtct
tttgccttgcagaagctttgcagtttcatgaggtcccatttgtcaatcct
caatcttacagcacaagccattgctgttctagtcaggaattttttccctg
agcccatatcttcaagacttttccccactttctcctctataagtttcagt
gtctctggttttatgtgaagttccttgatccacttaggtttgattttagt
acaaggagagaggaatgggtcgatttgcattcttctacatgataacaacc
agttgtgccagcaccaattgttgaaaatgctgtctttcttcactggatgg
ttttagctcccttgtcgagatcaagtgacatagtggtgtgggttcatttc
tgggtcttcaatcaattccattgggtctacttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacaatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagcagagaaagtacccaagagctaaagggatcttcaaccctata
gttgaacaacattattgactaacagtaccctgagctcctgacctctagct
gcatatgtatcaaagatggcctagtcgggcatcactgaaagaagaggccc
attgtacccgcagactgtgtgcccgtacaagggaccgcccaggctaaagg
gggggaatgtggtgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776681_142777220
seq2: B6Ng01-147E24.b_539_1075 (reverse)

seq1  CAAGTAGA-CCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  49
      |||||||| |||||||||| | ||||||||||||||||||||||||||| 
seq2  CAAGTAGACCCAATGGAATTG-ATTGAAGACCCAGAAATGAACCCACACC  49

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAG  99
       |||| ||||||||||| ||||||||||||||||||||||||||  ||||
seq2  ACTAT-GTCACTTGATC-TCGACAAGGGAGCTAAAACCATCCAG-TGAAG  96

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  146

seq1  TAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  199
      ||||||||||  |||||| |||| | | ||||||||||||||  ||||| 
seq2  TAGAAGAATGCAAATCGACCCATTCCTCTCTCCTTGTACTAAAATCAAAC  196

seq1  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  246

seq1  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATT  299
      |||||||||||||||||||| ||||||||||||||| ||||| | |||||
seq2  GAGGAGAAAGTGGGGAAAAGTCTTGAAGATATGGGCTCAGGGAAAAAATT  296

seq1  CCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAAT  349
      |||||  |||||||||||||||||||||||||||| ||| ||||||||||
seq2  CCTGACTAGAACAGCAATGGCTTGTGCTGTAAGATTGAGGATTGACAAAT  346

seq1  GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAAT  399
      ||||||| |||||||| ||||| ||||||||||||||||||| |||||||
seq2  GGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACATCGTCAAT  396

seq1  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  449
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCTTAA  446

seq1  ATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  499
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  ATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAGGGTGG  496

seq1  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  540
      ||| ||||||||||||||||||| |||||| ||||||||||
seq2  ACTCCAGAAAATCAAATAACCCCCTTAAAAGATGGGGCTCA  537