BAC Information

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BAC

Clone NameB6Ng01-147I20
Chromosome2 (Build37)
Map Location 86,236,156 - 86,343,480
singlet/doubletdoublet
Overlap geneOlfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1
Upstream geneOlfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1
Downstream geneGA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147I20.bB6Ng01-147I20.g
ACCDH944401DH944402
length964860
definitionDH944401|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I20, 5' end.DH944402|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,342,524 - 86,343,480)(86,236,156 - 86,237,016)
sequence
gaattctttactgctttcaaggttaacaatcccatggggacatagcgata
atgagtaagtacacaataaataaaaatatattacaaagtagaggtgggga
tataatttattgacatgggcattataatgttttaatgtttacaaaatatt
tgctgacacatatgtgaatgtttattccttttttaaatttttatttcatg
tttctatagttatatttgcatagtaaaatgtaatcagtaatatgttataa
agcatataaaatttatcctgcaatagtggctatgaatatattaaaaattc
catcaccaatcatggaaaactgaattatgaaatgcttaaacttacagaca
cagtagctaaaagtgttatattgtaaaagttattgagtagatatgtaagt
ttactactgtagatcaaacaccaattgaattaataggaaaaatcagagaa
tatatgaacatataaattctttattaattttaatttagtatgtgtacaca
ttggtaaatttggggaaatactccattaatagctctttttctactgtccc
aacctgaactgcctgtttatatttagataaaagggcaaggattttatgct
gtattgtatttaatatgccctaagggtgtgcatgggatgtaaagcaaaaa
tcatgaaaaatgagtgaataaaaatagccactctgaagagacagctatat
cagggtcctttcagcaaaatcttgctggcatatgctatagtgtctgcgtt
tggtggctgatttatggaatggacccccatgtggggcagtctctggatgg
tccatcctttcatcttaaactccaaactttgtctctgtaactcctccagg
ggtatacttgttcctatttccagggaggaatggaagtatccacatggtgg
tcttccttcttccttgatttttctttttgatttgcaaattgtatcctggg
ttttcctaagtttc
gaattccatgatgtacaaagaagaacaggaaataaaatatacagatctga
tcaataaataaataaataaataaatacttatacaaatttttgtagccaag
cctaatcatctatctgaaatgctgcactcactcaaaggtacatatacact
aaattaagaaaataataggttctatgaagaaactaaagttgtttcagtga
cgaaatactccaaattaaccagaaccgggagaatcacagatgtagctaag
gttgatgtgatgggtaagtttcatgtgatgggacatacaggcaaggtctg
tagtgatttacacacaaagcagagaactcaattttctctcactgtggtca
actgagattttcatacaactcatagaattgaatgaattagaaaggagcta
gagaaagtacccaaagagctaaaggggtctgcagccctctaagataaaca
acaatatgaacaacccagtaatcctgagagttgtgtctctagttgcacat
gtagcagaggatggaatagttggccatcaataggaggagaggcccttggt
ctcgggaagattatatgctccagtacaggggaattccaggtccaggaagc
aggagtgggtaggttggggaacagggcagggggatggtataagggacttt
aaggatagcatttgaaatataaatgaagaaaaatctaataaaaaaaagaa
aaaaatgaatttttaaaaaactaacgaatatggtgacataaaaatgcaac
acattataaacataatgagtcaagtatgcaaaactatttagccctgctct
atagctcctgttctatttaagaatacaaaactatatcaatgcatcttgtg
atctttacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86342524_86343480
seq2: B6Ng01-147I20.b_42_1005 (reverse)

seq1  GAAACTTA-GAATACCCAAGATACAATTTGCAAATACAAAAG-AAAATCA  48
      |||||||| ||| ||||| ||||||||||||||||  ||||| |||||||
seq2  GAAACTTAGGAAAACCCAGGATACAATTTGCAAATCAAAAAGAAAAATCA  50

seq1  A-GAAGAAGGAAGACCAACATGTGGATACTT-CATTCCTCCCTGG-AATA  95
      | ||||||||||||||| ||||||||||||| ||||||||||||| ||||
seq2  AGGAAGAAGGAAGACCACCATGTGGATACTTCCATTCCTCCCTGGAAATA  100

seq1  GGAAACAGTATACCCCTGGAAGGAGTTACAGAGACAAAGTTTGGAG-TTA  144
      ||||  ||||||||||||| |||||||||||||||||||||||||| |||
seq2  GGAACAAGTATACCCCTGG-AGGAGTTACAGAGACAAAGTTTGGAGTTTA  149

seq1  AGATGAAAGGATGGACCATCCAGAGACTGCCCCACATGGGGGTCCATTCC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAGGATGGACCATCCAGAGACTGCCCCACATGGGGGTCCATTCC  199

seq1  AT-AATCAGCCACCAAACGCAGACACTATAGCATATGCCAGCAAGATTTT  243
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAGCCACCAAACGCAGACACTATAGCATATGCCAGCAAGATTTT  249

seq1  GCTGAAAGGACCCTGATATAGCTGTCTCTTCAGAGTGGCTATTTTTATTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGACCCTGATATAGCTGTCTCTTCAGAGTGGCTATTTTTATTC  299

seq1  ACTCATTTTTCATGA-TTTTGCTTTACATCCCATGCACACCCTTAGGGCA  342
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTCATTTTTCATGATTTTTGCTTTACATCCCATGCACACCCTTAGGGCA  349

seq1  TATTAAATACAATACAGCATAAAATCCTTGCCCTTTTATCTAAATATAAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATACAATACAGCATAAAATCCTTGCCCTTTTATCTAAATATAAA  399

seq1  CAGGCAGTTCAGGTTGGGACAGTAGAAAAAGAGCTATTAATGGAGTATTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGTTCAGGTTGGGACAGTAGAAAAAGAGCTATTAATGGAGTATTT  449

seq1  CCCCAAATTTACCAATGTGTACACATACTAAATTAAAATTAATAAAGAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATTTACCAATGTGTACACATACTAAATTAAAATTAATAAAGAAT  499

seq1  TTATATGTTCATATATTCTCTGATTTTTCCTATTAATTCAATTGGTGTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTTCATATATTCTCTGATTTTTCCTATTAATTCAATTGGTGTTT  549

seq1  GATCTACAGTAGTAAACTTACATATCTACTCAATAACTTTTACAATATAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACAGTAGTAAACTTACATATCTACTCAATAACTTTTACAATATAA  599

seq1  CACTTTTAGCTACTGTGTCTGTAAGTTTAAGCATTTCATAATTCAGTTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAGCTACTGTGTCTGTAAGTTTAAGCATTTCATAATTCAGTTTT  649

seq1  CCATGATTGGTGATGGAATTTTTAATATATTCATAGCCACTATTGCAGGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATTGGTGATGGAATTTTTAATATATTCATAGCCACTATTGCAGGA  699

seq1  TAAATTTTATATGCTTTATAACATATTACTGATTACATTTTACTATGCAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATATGCTTTATAACATATTACTGATTACATTTTACTATGCAA  749

seq1  ATATAACTATAGAAACATGAAATAAAAATTTAAAAAAGGAATAAACATTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTATAGAAACATGAAATAAAAATTTAAAAAAGGAATAAACATTC  799

seq1  ACATATGTGTCAGCAAATATTTTGTAAACATTAAAACATTATAATGCCCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTGTCAGCAAATATTTTGTAAACATTAAAACATTATAATGCCCA  849

seq1  TGTCAATAAATTATATCCCCACCTCTACTTTGTAATATATTTTTATTTAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAAATTATATCCCCACCTCTACTTTGTAATATATTTTTATTTAT  899

seq1  TGTGTACTTACTCATTATCGCTATGTCCCCATGGGATTGTTAACCTTGAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACTTACTCATTATCGCTATGTCCCCATGGGATTGTTAACCTTGAA  949

seq1  AGCAGTAAAGAATTC  957
      |||||||||||||||
seq2  AGCAGTAAAGAATTC  964

seq1: chr2_86236156_86237016
seq2: B6Ng01-147I20.g_69_928

seq1  GAATTCCATGATGTACAAAGAAGAACAGGAAATAAAATATACAGATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATGTACAAAGAAGAACAGGAAATAAAATATACAGATCTGA  50

seq1  TCAATAAATAAATAAATAAATAAATACTTATACAAATTTTTGTAGCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATAAATAAATAAATAAATACTTATACAAATTTTTGTAGCCAAG  100

seq1  CCTAATCATCTATCTGAAATGCTGCACTCACTCAAAGGTACATATACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCATCTATCTGAAATGCTGCACTCACTCAAAGGTACATATACACT  150

seq1  AAATTAAGAAAATAATAGGTTCTATGAAGAAACTAAAGTTGTTTCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGAAAATAATAGGTTCTATGAAGAAACTAAAGTTGTTTCAGTGA  200

seq1  CGAAATACTCCAAATTAACCAGAACCGGGAGAATCACAGATGTAGCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATACTCCAAATTAACCAGAACCGGGAGAATCACAGATGTAGCTAAG  250

seq1  GTTGATGTGATGGGTAAGTTTCATGTGATGGGACATACAGGCAAGGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGTGATGGGTAAGTTTCATGTGATGGGACATACAGGCAAGGTCTG  300

seq1  TAGTGATTTACACACAAAGCAGAGAACTCAATTTTCTCTCACTGTGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTTACACACAAAGCAGAGAACTCAATTTTCTCTCACTGTGGTCA  350

seq1  ACTGAGATTTTCATACAACTCATAGAATTGAATGAATTAGAAAGGAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATTTTCATACAACTCATAGAATTGAATGAATTAGAAAGGAGCTA  400

seq1  GAGAAAGTACCCAAAGAGCTAAAGGGGTCTGCAGCCCTCTAAGATAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTACCCAAAGAGCTAAAGGGGTCTGCAGCCCTCTAAGATAAACA  450

seq1  ACAATATGAACAACCCAGTAATCCTGAGAGTTGTGTCTCTAGTTGCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGAACAACCCAGTAATCCTGAGAGTTGTGTCTCTAGTTGCACAT  500

seq1  GTAGCAGAGGATGGAATAGTTGGCCATCAATAGGAGGAGAGGCCCTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAGGATGGAATAGTTGGCCATCAATAGGAGGAGAGGCCCTTGGT  550

seq1  CTCGGGAAGATTATATGCTCCAGTACAGGGGAATTCCAGGTCCAGGAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAAGATTATATGCTCCAGTACAGGGGAATTCCAGGTCCAGGAAGC  600

seq1  AGGAGTGGGTAGGTTGGGGAACAGGGCAGGGGGATGGTATAAGGGACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGGTAGGTTGGGGAACAGGGCAGGGGGATGGTATAAGGGACTTT  650

seq1  AAGGATAGCATTTGAAATATAAATGAAGAAAAATCTAATAAAAAAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGCATTTGAAATATAAATGAAGAAAAATCTAATAAAAAAAAGAA  700

seq1  AAAAATGAATTTTT-AAAAACTAACGAATATGGTGACATAAAAATGCAAC  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAAATGAATTTTTAAAAAACTAACGAATATGGTGACATAAAAATGCAAC  750

seq1  ACATTATAAACATAATGAGTCAAGTATGCAATACTATTTAAGCCCTGCTC  799
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  ACATTATAAACATAATGAGTCAAGTATGCAAAACTATTT-AGCCCTGCTC  799

seq1  TATAGCTCCTGTTCTATTTAAAGAGTACAAAACTATACCAATGCATCTTG  849
      ||||||||||||||||||| |||| |||||||||||| ||||||||||||
seq2  TATAGCTCCTGTTCTATTT-AAGAATACAAAACTATATCAATGCATCTTG  848

seq1  TGATCTTTACAC  861
      ||||||||||||
seq2  TGATCTTTACAC  860