BAC Information

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BAC

Clone NameB6Ng01-148M07
Chromosome2 (Build37)
Map Location 39,230,606 - 39,231,584
singlet/doubletsinglet
Overlap genenone
Upstream geneNek6, Psmb7, LOC674251, Nr5a1, Nr6a1, Olfml2a, LOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2
Downstream genePpia-ps2_560.1, LOC100042604, Magmas-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M07.bB6Ng01-148M07.g
ACCDH945285DH945286
length1,210973
definitionDH945285|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M07, 5' end.DH945286|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacacccctatactagctaattttgtgtcaacttgacacagctg
gcattatcacagagaaaggagcttcagttaaggaaatacctccatgagat
ccaactataaggcattttctcaattagtgatgaagggggaaaggcccttt
gtggatgggaccatctctgggctggtagtcttggttctataagagagcag
gctgagcaagccaggggaagcaagccagtaaagaacacccatggcctctg
catcagctcctgcttcctgacctgcttgagttccagtcctgacttccttg
gtgatgaacagcagtatggaagtgtaagcagaataaaccatttcctcccc
aatttgcttcttggtcatgatgtttgtgcaggaagagaaaccctgactaa
gacaaccccactctcaccaatggacagattctggaaacagaaactaaaca
gagacacagtgaaactaacagaagttatgaaacaaatagatttaacagat
atctacagaacattttaccctaaaaccgaaggatataccttcttctcggc
acctcatgataaattctccaaaattgatcatataatcagtcaaaaaaaaa
aaaaaaaaaaaaaaaaacaggcctcaacacatacaaaaatattgaaatta
tgccatgcatcctatcagatcaccatggactaaggctgatcttcaataac
aacatgaataatagaaagccaacattcacatggaagctgaataacactct
tctcaatgataccttggtcaaggaagaaataaagagattaaagacttttt
agagtatagtgaaaaagaagccacaacatacccaaacttatgggacacaa
tgaaagcagtcctaagagaaaacctcatagctgtgaggctgccaaaatga
atgagacagagcatacactagcagcttgacggcacactaaaagttctaga
gcaaaggagaaattcacccaagattggcaggaatatcactcaggctgaat
cactattggatcaaagactattcaagaatcacaaacaggactgtcttgaa
aatcacaagatagataagcttaggcgactactaagcccaggaagtatctt
atgcaatccaattgatgtcaattcacgaatctgggattcgactcgatgtc
tctagcttttcaactgaactatgatgcaattctgaatacggccaagctac
tccctcatta
gaattctttttgtaacttggctgaaattcagacctgtactccgtttgttc
tctctctctctctctctctctctctctctctctctctcatcttatgtcta
taagtgttttgtctgcttgtatgggtgggtgcaccgtgagcttgacagat
gtgggtggaatccaaaagatatctttgcctatcctggaactggagtacag
gtggctgatagcctctgtgtgggtaatgggaaccaaacccggatcctctg
attttaactgctgagatatctttccagcctccactcaacccttctctctt
cttctatactttggtctttctctagtctctttgactctacctgccataac
aaaagaacttccagggttacaaaaactgaaaacaaaacaaaatccaaaga
tacattcaggtagccccaggcttcctccaggggtaactgtggctgctcac
ccatacctctttcttgggatttctcacggtcttctaactccaaatgacag
ggtgtcagatggagacagtggtgctatgtcaccggttagtagatacctat
gactcattgtaaggttgtcttaaaaaaattgaccaatgacatttgacaaa
aaggacagaagatagatatcatgctcaacttgctgtgaaccacctcattt
attcattaaaaattcgtaaagaccgattttgcccaaagaggtccccgaac
actgtctatagttttatttcattgatttggtacctctctatttgtttatt
tgctttgtgagacatgtttttttgtatagctctgctgctctgggactggc
actgtagaccatgctggccttaaactcagagattagcctgcccctgtgtc
cagaatactgggatcaaaggcatgtgccacactgctagcctgaattgggg
cctctttacacatggatcaggactatctatggtcagtacattctgttctg
ggaccccttggttattaattaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_39230606_39231584
seq2: B6Ng01-148M07.g_69_1041

seq1  GAATTCTTTTTGTAACTTGGCTGAAATTCAGACCTGTACTCCGTTTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGTAACTTGGCTGAAATTCAGACCTGTACTCCGTTTGTTC  50

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTATGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTATGTCTA  100

seq1  TAAGTGTTTTGTCTGCTTGTATGGGTGGGTGCACCGTGAGCTTGACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTTTGTCTGCTTGTATGGGTGGGTGCACCGTGAGCTTGACAGAT  150

seq1  GTGGGTGGAATCCAAAAGATATCTTTGCCTATCCTGGAACTGGAGTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGAATCCAAAAGATATCTTTGCCTATCCTGGAACTGGAGTACAG  200

seq1  GTGGCTGATAGCCTCTGTGTGGGTAATGGGAACCAAACCCGGATCCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGATAGCCTCTGTGTGGGTAATGGGAACCAAACCCGGATCCTCTG  250

seq1  ATTTTAACTGCTGAGATATCTTTCCAGCCTCCACTCAACCCTTCTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACTGCTGAGATATCTTTCCAGCCTCCACTCAACCCTTCTCTCTT  300

seq1  CTTCTATACTTTGGTCTTTCTCTAGTCTCTTTGACTCTACCTGCCATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATACTTTGGTCTTTCTCTAGTCTCTTTGACTCTACCTGCCATAAC  350

seq1  AAAAGAACTTCCAGGGTTACAAAAACTGAAAACAAAACAAAATCCAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACTTCCAGGGTTACAAAAACTGAAAACAAAACAAAATCCAAAGA  400

seq1  TACATTCAGGTAGCCCCAGGCTTCCTCCAGGGGTAACTGTGGCTGCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCAGGTAGCCCCAGGCTTCCTCCAGGGGTAACTGTGGCTGCTCAC  450

seq1  CCATACCTCTTTCTTGGGATTTCTCACGGTCTTCTAACTCCAAATGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCTCTTTCTTGGGATTTCTCACGGTCTTCTAACTCCAAATGACAG  500

seq1  GGTGTCAGATGGAGACAGTGGTGCTATGTCACCGGTTAGTAGATACCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGATGGAGACAGTGGTGCTATGTCACCGGTTAGTAGATACCTAT  550

seq1  GACTCATTGTAAGGTTGTCTTAAAAAAATTGACCAATGACATTTGACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATTGTAAGGTTGTCTTAAAAAAATTGACCAATGACATTTGACAAA  600

seq1  AAGGACAGAAGATAGATATCATGCTCAACTTGCTGTGAACCACCTCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGAAGATAGATATCATGCTCAACTTGCTGTGAACCACCTCATTT  650

seq1  ATTCATTAAAAATTCGTAAAGACCGA-TTTGCCCAAAGAGGTCCCCGAAC  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTCATTAAAAATTCGTAAAGACCGATTTTGCCCAAAGAGGTCCCCGAAC  700

seq1  ACTGTCTATAGTTTTATTTCATTGATTTGGTACCTCTCTATTTGTTTATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTATAGTTTTATTTCATTGATTTGGTACCTCTCTATTTGTTTATT  750

seq1  TGCTTTGTTGAGACATGTTTTTTTGTATAGCTCTGGCTGCTCTGGGACTG  799
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  TGCTTTG-TGAGACATGTTTTTTTGTATAGCTCT-GCTGCTCTGGGACTG  798

seq1  GCACTGTAGACCATGCTGGCCTTAAACTCAGAGATTAGCCTGCCCCTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTAGACCATGCTGGCCTTAAACTCAGAGATTAGCCTGCCCCTGTG  848

seq1  TCCAGAATACTGGGATCAAAGGCATGTGCCACCACTGCTAGCCCTGAATT  899
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  TCCAGAATACTGGGATCAAAGGCATGTGCCA-CACTGCTAG-CCTGAATT  896

seq1  GGGGCCTTCTTTACACATGGATCAGGACTATCTATGGTCAGTACATTTCT  949
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGGCC-TCTTTACACATGGATCAGGACTATCTATGGTCAGTACA-TTCT  944

seq1  GTTCTGGGACCCCTTGGTTAATTAATTAAT  979
      ||||||||||||||||||| ||||||||||
seq2  GTTCTGGGACCCCTTGGTT-ATTAATTAAT  973