BAC Information

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BAC

Clone NameB6Ng01-149B05
Chromosome2 (Build37)
Map Location 136,156,610 - 136,157,899
singlet/doubletsinglet
Overlap genePak7
Upstream genePlcb1, LOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik
Downstream geneLOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B05.bB6Ng01-149B05.g
ACCDH945511DH945512
length1,1931,242
definitionDH945511|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B05, 5' end.DH945512|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatgaggttatttgatt
ttctggagtccacctttttgagttctttatatatattggatattagtccc
ctatcggatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacttgcagaagctttgcaattttatgaggtcccattt
atcgattctcggtcttacagcacaagccattgctgttctattcgggaatt
tttcccctgtacccatatcttccaggtttttccccactttctcctctata
agtttcagtgtctctggttttatgtgcagttccttaatccacttagattt
gaccttagtacaaggagataggaatggatcaattcacattcttctacatg
ataaaaaccagttgtgccagcaccatttgttgaaaatgctttctttttcc
cactggatggttttagctcccttgtcaaagatcaggtgaccataggtgtg
tgggctcatctcagggtcttcaattctattccattggtctacttgtctgt
cgctataccagtaccatggagtttttattacaattgctctgtagtacagt
tttaggtccggcatggtgattccaccaaaggtacttttatccttgagaag
agtttttgctatcctaggtttttggtgttccagatgaatttggagattgc
cctttctaattcgttgaagaattgagttggaattttgatggggattgcat
tgaatctgtagattgcttttggcaagatagccatttttacaatgttgatc
ctgccaatccatgagcatgggagatctttccatcttctaagatcttcttt
aatttctttcttcagagacttgaagttcttgtcatacagatctttcactt
ccttagttagagtccaaccaaagtttttcatattatttgtgactattgag
aaggtgttgtttccctaatttcttctcagcctgtttatcctttgtgtaca
gaaaggcaatggacttgtttgagtaatttatattcagctacttcatgaag
ctgtttatcagggttaaggagttctttggtgaatttttagggcacttata
ttacctatcatatcactggcagagagtgtatatttggacttctctctttc
caatttggtacctttgatctcgttggtggcacaatggtccggc
gaattcaaagctagcttgatatacatagagttccaggccagctagggata
cataaggaaaccccacccctttcgtttaaagacataaaacttctagggaa
aaagaaaacccaagggaagatttttcatggaaaccattacaacaaaagaa
tgcagaaaagatataaataaacattcgactgttatggttagaaagttcta
gacattttctagccaaccccactttataggtgaatggctgagatttaaaa
gggtgggaaggtttgcttagcagacacagatataatacagacctttggtc
acttttcaattgggaatgctatccctttatggtggttgagccacttgaaa
ttgacattgcaaagttataaaaatggtcaagtgttgccaatttcatgaat
ctcaacttatacactccagttctctcttttttttcaactttgtgctaagg
aatagggatttcaggataaactattgcctacatattcctccttaaatttt
taaattttatccaggaaatgtgtgcaggggctgagtaacaacaacaaaaa
tctactgaaacaggaatttgcctctaaggagtaatgatatttaaaaaatt
caaaacaaaacaaaacaggtcagagtggctgtcacagtgtgggcaggatt
attgccaaccctcaaagtaaggtgacccaggaggggcataagtagattat
gattataaacacaatgcttacggataaagatttatgctacttaagggaag
catgagaatggctagcaaggtgtggatcaaaacaaaccagttacacagct
ggcaatgttgaagtcgccaccacccatttcccataggagactatccccac
cttctttagaagatgctattggatctcaatgacatttgcaggaaagcaca
ggtcccacctctgaaattcctcatttctcaaatctcagatataatttggc
ttctcataggattgactgaaagaaagctgtcccacaaaggacacatacat
gaaattcttagagttgtgtttctatgcacattgatacatcagccgtgctt
catacatcattgtcgtttttatggtcatagtatttagtccatatcaagaa
atataaggtaatgattacgaactgatatccctgctctgccagagaacttt
tcaagtcatgtgaactgcttactttggacatgaaagtagaacttgattaa
gatcaagacgcctttccaaaagaaagcggattgataaaccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136156610_136157899
seq2: B6Ng01-149B05.g_67_1308

seq1  GAATTCAAAGCTAGCTTGATATACATAGAGTTCCAGGCCAGCTAGGGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTAGCTTGATATACATAGAGTTCCAGGCCAGCTAGGGATA  50

seq1  CATAAGGAAACCCCACCCCTTTCGTTTAAAGACATAAAACTTCTAGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGAAACCCCACCCCTTTCGTTTAAAGACATAAAACTTCTAGGGAA  100

seq1  AAAGAAAACCCAAGGGAAGATTTTTCATGGAAACCATTACAACAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACCCAAGGGAAGATTTTTCATGGAAACCATTACAACAAAAGAA  150

seq1  TGCAGAAAAGATATAAATAAACATTCGACTGTTATGGTTAGAAAGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAAGATATAAATAAACATTCGACTGTTATGGTTAGAAAGTTCTA  200

seq1  GACATTTTCTAGCCAACCCCACTTTATAGGTGAATGGCTGAGATTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTCTAGCCAACCCCACTTTATAGGTGAATGGCTGAGATTTAAAA  250

seq1  GGGTGGGAAGGTTTGCTTAGCAGACACAGATATAATACAGACCTTTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAAGGTTTGCTTAGCAGACACAGATATAATACAGACCTTTGGTC  300

seq1  ACTTTTCAATTGGGAATGCTATCCCTTTATGGTGGTTGAGCCACTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCAATTGGGAATGCTATCCCTTTATGGTGGTTGAGCCACTTGAAA  350

seq1  TTGACATTGCAAAGTTATAAAAATGGTCAAGTGTTGCCAATTTCATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTGCAAAGTTATAAAAATGGTCAAGTGTTGCCAATTTCATGAAT  400

seq1  CTCAACTTATACACTCCAGTTCTCTCTTTTTTTTCAACTTTGTGCTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTTATACACTCCAGTTCTCTCTTTTTTTTCAACTTTGTGCTAAGG  450

seq1  AATAGGGATTTCAGGATAAACTATTGCCTACATATTCCTCCTTAAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGATTTCAGGATAAACTATTGCCTACATATTCCTCCTTAAATTTT  500

seq1  TAAATTTTATCCAGGAAATGTGTGCAGGGGCTGAGTAACAACAACAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATCCAGGAAATGTGTGCAGGGGCTGAGTAACAACAACAAAAA  550

seq1  TCTACTGAAACAGGAATTTGCCTCTAAGGAGTAATGATATTTAAAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGAAACAGGAATTTGCCTCTAAGGAGTAATGATATTTAAAAAATT  600

seq1  CAAAACAAAACAAAACAGGTCAGAGTGGCTGTCACAGTGTGGGCAGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAGGTCAGAGTGGCTGTCACAGTGTGGGCAGGATT  650

seq1  ATTGCCAACCCTCAAAGTAAGGTGACCCAGGAGGGGCATAAGTAGATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAACCCTCAAAGTAAGGTGACCCAGGAGGGGCATAAGTAGATTAT  700

seq1  GATTATAAACACAATGCTTACGGATAAAGATTTATGCTACTTAAGGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAAACACAATGCTTACGGATAAAGATTTATGCTACTTAAGGGAAG  750

seq1  CATGAGAATGGCTAGCAAGGTGTGGATCAAAACAAACCAGTTACACAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAATGGCTAGCAAGGTGTGGATCAAAACAAACCAGTTACACAGCT  800

seq1  GGCAATGTTGAAGTCGCCACCACCCATTTCCCATAGGAGACTATCCCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGTTGAAGTCGCCACCACCCATTTCCCATAGGAGACTATCCCCAC  850

seq1  CTTCTTTAGAAGATGCTATTGGATCTCAATGACATTTGCAGGAAAGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTAGAAGATGCTATTGGATCTCAATGACATTTGCAGGAAAGCACA  900

seq1  GGTCCCACCTCTGAAATTCCTCATTTCTCAGATCTCAAGATTATAATTTG  950
      |||||||||||||||||||||||||||||| ||||| ||| |||||||||
seq2  GGTCCCACCTCTGAAATTCCTCATTTCTCAAATCTC-AGA-TATAATTTG  948

seq1  GCTTCTCATTAGGATATGACCTGAAAGAAAGGCTGTCCCCAACAAAGGAC  1000
      |||||||| |||||| ||| |||||||||| ||||||||  |||||||||
seq2  GCTTCTCA-TAGGAT-TGA-CTGAAAGAAA-GCTGTCCC--ACAAAGGAC  992

seq1  ACATACATGAAATTCTTAGAGTTTGTGTTTCTATTGCACATTGATACATC  1050
      ||||||||||||||||||||| ||||||||||| ||||||||||||||||
seq2  ACATACATGAAATTCTTAGAG-TTGTGTTTCTA-TGCACATTGATACATC  1040

seq1  AGCCCGTTGCCTTCCATACATCATTGTCTGTATTTTATGGTCATAGTTAA  1100
      ||||   |||  | |||||||||||||| || |||||||||||||||  |
seq2  AGCC--GTGC--TTCATACATCATTGTC-GT-TTTTATGGTCATAGT--A  1082

seq1  TTTAAGTTCATATTTAAGAAATAATAAGGTAAATGATTACAGAAACATGG  1150
      ||| ||| |||| | ||||||| ||||||| ||||||||| ||   |  |
seq2  TTT-AGTCCATA-TCAAGAAAT-ATAAGGT-AATGATTAC-GA---ACTG  1124

seq1  ATATCCCTTGGCTCTGCCCCAGAGACTTTTCTCAGAGTCAGTGGAACTGC  1200
      ||||||||  ||||||||  ||| |||||||    |||||   |||||||
seq2  ATATCCCT--GCTCTGCCAGAGA-ACTTTTC---AAGTCATGTGAACTGC  1168

seq1  TCAGCTTGTGAGCATGAGAAGATGGAAGAACTGGAGTAAAGATCACAGAA  1250
      | | ||| ||  ||||| |     | |||||| || | ||||||    ||
seq2  TTA-CTT-TGGACATGAAA-----GTAGAACTTGA-TTAAGATC----AA  1206

seq1  GCAGCCTTTCACAAAAGAGAAGCGGATTGAAAATAACCTA  1290
      |  ||||||| ||||||| ||||||||||| |  ||||||
seq2  GACGCCTTTC-CAAAAGA-AAGCGGATTGATA--AACCTA  1242