BAC Information

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BAC

Clone NameB6Ng01-149C04
Chromosome2 (Build37)
Map Location 47,515,826 - 47,517,033
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149C04.bB6Ng01-149C04.g
ACCDH945556DH945557
length1,0371,181
definitionDH945556|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C04, 5' end.DH945557|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaacctagctaacttatctgagctattgaagtcattttttgtt
ggaagcgactctacaaacactactttactaagcaaaggtaacccctaaca
acaatctataaatgattgttcatacatccatagataagtatagcgttcat
ccctcatcaaggaaacttctctgaaacagatggagaccattagtaaaaaa
tgcaaccaatcaaattgcaagagtcctaaccagtcctaacatacaaatct
ataaaatacgcacatagctaaggctcagggaacgttgcaaaagcaggcat
ggaaagattataagagccagaggatcagcatgttctctgtgagattatgt
ctcttagtaatgtcaagaagatacacccatgaagtctcactaacctgact
gccaaaatgtgagtttagcaaggataataccagtggacatgctatggaca
tgctaaactagacagtgaaagcccatgaggccaaaacctgatacacacac
acacacacacacacacacacacgcatgcatgcactcacacatacacgcac
gcacacagagatggtcaaagcccaggagggcaatgccacacacacacaca
cacacacacacacacacacacaattataggcaactgagcaaagctgggaa
ttggagagatggccttggtcagtgaagactacagtacagtaattgtccag
tgccaagtagtcaccccttaaaacatatatacaagtaacattgtacagac
tgagcaggttatatttgcgaatatatgcacatagatatatgtaggcaaca
acaactagtgaataaagaggccatgcatttgaagaagagtgggagatgga
atactggggcgggggggagttggaggtacacattatagggagaatgttgt
atttaaagtttattttaaattaaaaattaattaagaaaagggtccattat
ggcctccctgtgtcctctcatgggctgattggctcatagtccaagctggg
cttttctggccaagaaaattattttccttcaggtgct

gaattcaggttgacaaccaagattaggtaacacagagagcatgggctagt
tgaagaaaaaagtatatccagtgtctagacccacccaaatcctgggaata
aagaggcagataagggagagcacaaactcgactctggctgtaaagaccaa
agatcaatgagcagaatgaaaaatagacagcaagatacatagaatagaca
gaattatatggctatagagtgagaatttatctcgaaggaaacaaggaaaa
aaaataggattgggccagagtcgtgctttttggaagatattattttgtca
tttttcataagaaaatagtagttatggcaagagttgctgatagtgaggaa
ggaccatatggcacctgcaaaatagccctcacccttctacactcttccta
tctttgtatgccttttttatctttgctctttgaatttagaggactttaat
gcactagtgatagtccagttacccttcttacaacatctgcattgtggaaa
cttattttagtccataaagtacaatagttaaggggtgctatttgcaagtc
tagtcctcagaaaggttagtctgcctatgttcaatgaaaatctagtaaat
caccctgagaactggacttacagaatgataacaaacacatgaccaagagg
tgtggccccagctggatactttaggaaccaacaacttccaagctgaatgg
actgctgcgagcaggtgcagtgcagctgaaggcagcctatattaatggcc
aagaggaataggaactaagatgtaaaatacattgtcaagttttaagatac
taaatttgatgcttttctttttctgtggcaaaagctaactgatgcagaaa
taattggtttctagaactgaggtgctgccacaacagaatctaaaataagt
gccattggcagtgtgctcagagcagagaatgagaaatggcaaacaaaatc
ttcacaatgctaggagaaaatacagcaaattgttattggaggtagaaatg
gtgatatgagtgtttagagtaaaataattagtaacatgatgctgcacaat
aataatgaaagccatctttacatgactttcattttggcttagagtcctat
gagaatttgaaatgcagcgtggtctagatgcaataggtatagacgaagca
tgttctcaataaagattgccagctgcaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47515826_47517033
seq2: B6Ng01-149C04.g_67_1247

seq1  GAATTCAGGTTGACAACCAAGATTAGGTAACACAGAGAGCATGGGCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTGACAACCAAGATTAGGTAACACAGAGAGCATGGGCTAGT  50

seq1  TGAAGAAAAAAGTATATCCAGTGTCTAGACCCACCCAAATCCTGGGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAAAGTATATCCAGTGTCTAGACCCACCCAAATCCTGGGAATA  100

seq1  AAGAGGCAGATAAGGGAGAGCACAAACTCGACTCTGGCTGTAAAGACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAGATAAGGGAGAGCACAAACTCGACTCTGGCTGTAAAGACCAA  150

seq1  AGATCAATGAGCAGAATGAAAAATAGACAGCAAGATACATAGAATAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATGAGCAGAATGAAAAATAGACAGCAAGATACATAGAATAGACA  200

seq1  GAATTATATGGCTATAGAGTGAGAATTTATCTCGAAGGAAACAAGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATATGGCTATAGAGTGAGAATTTATCTCGAAGGAAACAAGGAAAA  250

seq1  AAAATAGGATTGGGCCAGAGTCGTGCTTTTTGGAAGATATTATTTTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGATTGGGCCAGAGTCGTGCTTTTTGGAAGATATTATTTTGTCA  300

seq1  TTTTTCATAAGAAAATAGTAGTTATGGCAAGAGTTGCTGATAGTGAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATAAGAAAATAGTAGTTATGGCAAGAGTTGCTGATAGTGAGGAA  350

seq1  GGACCATATGGCACCTGCAAAATAGCCCTCACCCTTCTACACTCTTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATATGGCACCTGCAAAATAGCCCTCACCCTTCTACACTCTTCCTA  400

seq1  TCTTTGTATGCCTTTTTTATCTTTGCTCTTTGAATTTAGAGGACTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTATGCCTTTTTTATCTTTGCTCTTTGAATTTAGAGGACTTTAAT  450

seq1  GCACTAGTGATAGTCCAGTTACCCTTCTTACAACATCTGCATTGTGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGTGATAGTCCAGTTACCCTTCTTACAACATCTGCATTGTGGAAA  500

seq1  CTTATTTTAGTCCATAAAGTACAATAGTTAAGGGGTGCTATTTGCAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTAGTCCATAAAGTACAATAGTTAAGGGGTGCTATTTGCAAGTC  550

seq1  TAGTCCTCAGAAAGGTTAGTCTGCCTATGTTCAATGAAAATCTAGTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTCAGAAAGGTTAGTCTGCCTATGTTCAATGAAAATCTAGTAAAT  600

seq1  CACCCTGAGAACTGGACTTACAGAATGATAACAAACACATGACCAAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGAGAACTGGACTTACAGAATGATAACAAACACATGACCAAGAGG  650

seq1  TGTGGCCCCAGCTGGATACTTTAGGAACCAACAACTTCCAAGCTGAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCCAGCTGGATACTTTAGGAACCAACAACTTCCAAGCTGAATGG  700

seq1  ACTGCTGCGAGCAGGTGCAGTGCAGCTGAAGGCAGCCTATATTAATGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGCGAGCAGGTGCAGTGCAGCTGAAGGCAGCCTATATTAATGGCC  750

seq1  AAGAGGAATAGGAACTAAGATGTAAAATACATTGTCAAGTTTTAAGATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAATAGGAACTAAGATGTAAAATACATTGTCAAGTTTTAAGATAC  800

seq1  TAAATTTGATGCTTTTCTTTTTCTGTGGCAAAAGCTAACTGATGCAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGATGCTTTTCTTTTTCTGTGGCAAAAGCTAACTGATGCAGAAA  850

seq1  TAATTGGTTTCTAGAACTGAGGTGCTGCCACAACAGAAATCTAAAATAAG  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAATTGGTTTCTAGAACTGAGGTGCTGCCACAACAG-AATCTAAAATAAG  899

seq1  TGCCATTGGCAGTGTGCTCAGAGCAGAGAATGAGAAATGGCAAACAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTGGCAGTGTGCTCAGAGCAGAGAATGAGAAATGGCAAACAAAAT  949

seq1  CTTCACAAATGCTAGGAGAAAATACAGCAAATTGTTATTGGAGGTTAGAA  1000
      |||||| ||||||||||||||||||||||||||||||||||||||   | 
seq2  CTTCAC-AATGCTAGGAGAAAATACAGCAAATTGTTATTGGAGGT---AG  995

seq1  AAATGGTGATATGAGTGTTTTAGAGTAAAATAATTAGTAAACATGATGCC  1050
      ||||||||||||||||| |||||||||||||||||||| ||||||||| |
seq2  AAATGGTGATATGAGTG-TTTAGAGTAAAATAATTAGT-AACATGATG-C  1042

seq1  TGCAACAATAATAATGAAAGCCAATCTTTACAATGACCTTTTCATTTTGG  1100
      ||| |||||||||||||||||| |||||||| |||||  |||||||||||
seq2  TGC-ACAATAATAATGAAAGCC-ATCTTTAC-ATGAC--TTTCATTTTGG  1087

seq1  CTTAAGAGTCCTATGAAGAATTTTGAAATGCCAGGCGGTTGGTCCTAGAT  1150
      ||| ||||||||||| |||| ||||||||||   |||  |||| ||||||
seq2  CTT-AGAGTCCTATG-AGAA-TTTGAAATGC--AGCG--TGGT-CTAGAT  1129

seq1  GCATATAGGTATAAGACGAAAGAAATGTTTTAAATAAAGATTGGCCAGCT  1200
      ||| |||||||| |||||||    ||||| | |||||||||| |||||| 
seq2  GCA-ATAGGTAT-AGACGAA--GCATGTTCTCAATAAAGATT-GCCAGC-  1173

seq1  TGCAAAGA  1208
      ||||||||
seq2  TGCAAAGA  1181


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