BAC Information

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BAC

Clone NameB6Ng01-149F19
Chromosome2 (Build37)
Map Location 167,943,947 - 168,108,290
singlet/doubletdoublet
Overlap geneAdnp, Dpm1, Mocs3, LOC100043908, Kcng1
Upstream geneKcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik, Pard6b
Downstream geneLOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149F19.bB6Ng01-149F19.g
ACCDH945720DH945721
length957445
definitionDH945720|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F19, 5' end.DH945721|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(168,107,332 - 168,108,290)(167,943,947 - 167,944,397)
sequence
gaattctccagaggactcagaccacagtaaggttttgagaacttctgctc
acatcctggtcctgccgtcctccatggggacagcagtagtaggcttgctg
tcataggacagtgctggcttcctccaacaatcactgaagaggctactctt
aagttttcccatgtggaagctgccggccagaggaagacagcacagccctt
gctctggaacccgaggctcagaagaaagcaagaaagatggatgtatgggt
ccttctgttcatgctaacagagcaccaaggaccagccatgttttcaacat
gggacgtgggagcactggcctccagagtccaccgagaacctttatgttgg
cctctgttatttatgtccctccggcacactgcctccccgtgtctctcagc
atctcagaagcctttgtttgccccttagtgggatctctttgcaaatctcc
caaagatgaggtcctctcagttcctggccctgatctggagtcgactttgt
tccatctgaagagcccctcccccacctccccttctacttgcacttcccgc
ccccctttctcctggtgtagacgctgcagaagcttgagagttcttgggac
aggtcctcagctgactctctgactctgccatctgtctccacccacgtgct
gagtgaacccaaagcttacatcccccggggccaagcctaagcaactcgtt
taaagaagccccaggcataggaggcacactcgctgagcttggttcctgag
tctctcctgcttccctgatggaggagaaaggacagtaccaatcaatttcc
ccagcaggttactccctctcttctcagacagttttcccactaatcccaat
cctgctgcaacttctgccaactcagaggcttcagaatccaccctgtcctc
ttccaggctgttgactgagttcaggaacccgaagactgcccgaccggacc
caccccg
tcatctgcacaaggctctaagtaccattccagcattctcaaattctctct
ctctctctctctctctctctctctctctctctctcacacacacacacaca
cacacacacacacacacacacacacaccaggagagaaatagctgttaatt
tgaaggtctgactcagctcactgtcagaacacgtacttgcctagcaaact
gcaggcccctccatccagcagtgtaagtggaggagagaagagagaaggct
ccaagtaaagagcatttgctgctcctgcagaggcccgggttctgttccca
gcacccacaatggtgacctacagctgcctgtaacctcagctacaggggtg
tccgataccttcttctggcctccatgacacacagacaagtgagcacacac
aaaagtattttttaaaaataaattaataggctgggtgtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_168107332_168108290
seq2: B6Ng01-149F19.b_45_1001 (reverse)

seq1  CCGGGTGGGTCCCGGTCTGGCAGTC-TCTGGGTCCTGTACTCAGTCAACA  49
      | |||||||| |||||| ||||||| || || ||||| ||||||||||||
seq2  CGGGGTGGGT-CCGGTCGGGCAGTCTTCGGGTTCCTGAACTCAGTCAACA  49

seq1  GCCTGG-AGAGGACAGGGTGGATTCTGGAGGCCTCTGAGTTGGCAGAAGT  98
      |||||| ||||||||||||||||||| || ||||||||||||||||||||
seq2  GCCTGGAAGAGGACAGGGTGGATTCT-GAAGCCTCTGAGTTGGCAGAAGT  98

seq1  TGCAGCAGGATTTGGGATTAGGTGGGAAAGCTGTCTGAGAAGAGAGGGAG  148
      |||||||||| ||||||||| |||||||| ||||||||||||||||||||
seq2  TGCAGCAGGA-TTGGGATTA-GTGGGAAAACTGTCTGAGAAGAGAGGGAG  146

seq1  TAACCTGCTTGGGGAAATTGATTGGTACTGTCCTTTCTCCTCCATCAGGG  198
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGC-TGGGGAAATTGATTGGTACTGTCCTTTCTCCTCCATCAGGG  195

seq1  AAGCAGGAGAGACTCAGGAACCAAGCTCAGCGAGTGTGCCTCCTATGCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAGAGACTCAGGAACCAAGCTCAGCGAGTGTGCCTCCTATGCCT  245

seq1  GGGGCTTCTTT-AACGAGTTGCTTAGGCTTGGCCCCGGGGGATGTAAGCT  297
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCTTTAAACGAGTTGCTTAGGCTTGGCCCCGGGGGATGTAAGCT  295

seq1  TTGGGTTCACTCAGCACGTGGGTGGAGACAGATGGCAGAGTCAGAGAGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCACTCAGCACGTGGGTGGAGACAGATGGCAGAGTCAGAGAGTC  345

seq1  AGCTGAGGACCTGTCCCAAGAACTCTCAAGCTTCTGCAGCGTCTACACCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGACCTGTCCCAAGAACTCTCAAGCTTCTGCAGCGTCTACACCA  395

seq1  GGAGAAAGGGGGGCGGGAAGTGCAAGTAGAAGGGGAGGTGGGGGAGGGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGGGGGGCGGGAAGTGCAAGTAGAAGGGGAGGTGGGGGAGGGGC  445

seq1  TCTTCAGATGGAACAAAGTCGACTCCAGATCAGGGCCAGGAACTGAGAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGATGGAACAAAGTCGACTCCAGATCAGGGCCAGGAACTGAGAGG  495

seq1  ACCTCATCTTTGGGAGATTTGCAAAGAGATCCCACTAAGGGGCAAACAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATCTTTGGGAGATTTGCAAAGAGATCCCACTAAGGGGCAAACAAA  545

seq1  GGCTTCTGAGATGCTGAGAGACACGGGGAGGCAGTGTGCCGGAGGGACAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGAGATGCTGAGAGACACGGGGAGGCAGTGTGCCGGAGGGACAT  595

seq1  AAATAACAGAGGCCAACATAAAGGTTCTCGGTGGACTCTGGAGGCCAGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAGAGGCCAACATAAAGGTTCTCGGTGGACTCTGGAGGCCAGTG  645

seq1  CTCCCACGTCCCATGTTGAAAACATGGCTGGTCCTTGGTGCTCTGTTAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACGTCCCATGTTGAAAACATGGCTGGTCCTTGGTGCTCTGTTAGC  695

seq1  ATGAACAGAAGGACCCATACATCCATCTTTCTTGCTTTCTTCTGAGCCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGAAGGACCCATACATCCATCTTTCTTGCTTTCTTCTGAGCCTC  745

seq1  GGGTTCCAGAGCAAGGGCTGTGCTGTCTTCCTCTGGCCGGCAGCTTCCAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCAGAGCAAGGGCTGTGCTGTCTTCCTCTGGCCGGCAGCTTCCAC  795

seq1  ATGGGAAAACTTAAGAGTAGCCTCTTCAGTGATTGTTGGAGGAAGCCAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAACTTAAGAGTAGCCTCTTCAGTGATTGTTGGAGGAAGCCAGC  845

seq1  ACTGTCCTATGACAGCAAGCCTACTACTGCTGTCCCCATGGAGGACGGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTATGACAGCAAGCCTACTACTGCTGTCCCCATGGAGGACGGCA  895

seq1  GGACCAGGATGTGAGCAGAAGTTCTCAAAACCTTACTGTGGTCTGAGTCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGGATGTGAGCAGAAGTTCTCAAAACCTTACTGTGGTCTGAGTCC  945

seq1  TCTGGAGAATTC  959
      ||||||||||||
seq2  TCTGGAGAATTC  957

seq1: chr2_167943947_167944397
seq2: B6Ng01-149F19.g_68_518

seq1  GAATTCTCATCTGCACAAGGCTCTAAGTACCATTCCAGCATTCTCAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTGCACAAGGCTCTAAGTACCATTCCAGCATTCTCAAATT  50

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACA  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACA  100

seq1  CACACACACACACACACACACACACACACACACCAGGAGAGAAATAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACCAGGAGAGAAATAGCTG  150

seq1  TTAATTTGAAGGTCTGACTCAGCTCACTGTCAGAACACGTACTTGCCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGAAGGTCTGACTCAGCTCACTGTCAGAACACGTACTTGCCTAG  200

seq1  CAAACTGCAGGCCCCTCCATCCAGCAGTGTAAGTGGAGGAGAGAAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCAGGCCCCTCCATCCAGCAGTGTAAGTGGAGGAGAGAAGAGAG  250

seq1  AAGGCTCCAAGTAAAGAGCATTTGCTGCTCCTGCAGAGGCCCGGGTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCAAGTAAAGAGCATTTGCTGCTCCTGCAGAGGCCCGGGTTCTG  300

seq1  TTCCCAGCACCCACAATGGTGACCTACAGCTGCCTGTAACCTCAGCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCACCCACAATGGTGACCTACAGCTGCCTGTAACCTCAGCTACA  350

seq1  GGGGTGTCCGATACCTTCTTCTGGCCTCCATGACACACAGACAAGTGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTCCGATACCTTCTTCTGGCCTCCATGACACACAGACAAGTGAGC  400

seq1  ACACACAAAAGTATTTTTTAAAAATAAATTAATAGGCTGGGTGTGGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAAAGTATTTTTTAAAAATAAATTAATAGGCTGGGTGTGGTGGT  450

seq1  G  451
      |
seq2  G  451