BAC Information

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BAC

Clone NameB6Ng01-151M02
Chromosome2 (Build37)
Map Location 29,463,415 - 29,464,546
singlet/doubletsinglet
Overlap genenone
Upstream geneGfi1b, Tsc1, 1700026L06Rik, 1190002A17Rik, LOC665643, Gtf3c4, Ddx31, Barhl1, LOC100033452, 1700101E01Rik, LOC100039666, Ttf1, Setx, Ntng2, Crsp8
Downstream geneRapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114, Tbc1d13, Slc39a1-ps, Endog, D2Wsu81e, Ccbl1, 1700084E18Rik, Lrrc8a, Phyhd1, Dolk, Nup188, Sh3glb2, 5730472N09Rik, Dolpp1, Crat, Ppp2r4, Ier5l, Cstad
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151M02.bB6Ng01-151M02.g
ACCDH947495DH947496
length1,111127
definitionDH947495|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M02, 5' end.DH947496|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttttagttaggttaatgaagaagggacatctgtgttccttg
tctacactaactctttcgtaaatggtataaaatttgtgcaagactcttcc
tgggaaccacctgagaacccagaactgcaccccctcacacccggcagggc
ttcgtgcctttcctaatgtagagtgtggagtagtggacgacaaagccaag
agcatcaggaaggaccattctaaagacaagatggtaactcctaactcccg
ttcaagctgtcactttttcactccaagagcttctcttcgttgaggctagc
ctgtggtctcagcaggggagtcggggtagagcagaagcaagcttgcaagc
cccaggccaatcaggagtgtctcaaaacacaagcaaaaaccacagctggg
aacagtcaaagatgcagaagttagtaacagtagcttctcctaagagtggg
aaatgtactttctatggtcttttgtgatttcatcccagtgttttagacag
ggtatcactgtgtaagccacgatagcctacaattcacagtgttcctgcct
tggcagtcattagaagtccaatgcttttattttaaggtattagagactgg
agtgtagctgtataataatgataacaccaccagaagcaccacagagacat
gcctggtgccaagggtaacaactgtgcagagccagtgtgtagctcacatc
tgtctgctttctagtagggatcctggagctgccttgggcaactataagag
ccggttaccactgagtttcactgccacctgaactgcatcgctcagccagg
tctccatgccatcgtagatgagatgtaccatgtggagtggactccacatt
ctatgacactgcctttcctgttggcttcttattgccctgcccacttcctc
ctctcaccctgttttaaactgctggccgtgaatctttttctttctttttt
tttttatgtttttgatccattttgatattatttttcttgatattttcata
ttacattcaatgtttcccttttcagtctccctcagaacttcctatcccat
cccctcccctgctttatgagggtgatcctccaacaccaattctcatcctt
cccgctctgtt
ttctccagcgttacagctcagtaaagacagccactttcaaacgatccttg
gtgaagtaacttgtgtgctttattccatgtggacagggactacaagaacc
ttggggagtggggtgggatgggatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_29463415_29464546
seq2: B6Ng01-151M02.b_46_1156

seq1  GAATTCTCCTTTTAGTTAGGTTAATGAAGAAGGGACATCTGTGTTCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTAGTTAGGTTAATGAAGAAGGGACATCTGTGTTCCTTG  50

seq1  TCTACACTAACTCTTTCGTAAATGGTATAAAATTTGTGCAAGACTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTAACTCTTTCGTAAATGGTATAAAATTTGTGCAAGACTCTTCC  100

seq1  TGGGAACCACCTGAGAACCCAGAACTGCACCCCCTCACACCCGGCAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACCACCTGAGAACCCAGAACTGCACCCCCTCACACCCGGCAGGGC  150

seq1  TTCGTGCCTTTCCTAATGTAGAGTGTGGAGTAGTGGACGACAAAGCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGCCTTTCCTAATGTAGAGTGTGGAGTAGTGGACGACAAAGCCAAG  200

seq1  AGCATCAGGAAGGACCATTCTAAAGACAAGATGGTAACTCCTAACTCCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGGAAGGACCATTCTAAAGACAAGATGGTAACTCCTAACTCCCG  250

seq1  TTCAAGCTGTCACTTTTTCACTCCAAGAGCTTCTCTTCGTTGAGGCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTGTCACTTTTTCACTCCAAGAGCTTCTCTTCGTTGAGGCTAGC  300

seq1  CTGTGGTCTCAGCAGGGGAGTCGGGGTAGAGCAGAAGCAAGCTTGCAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCTCAGCAGGGGAGTCGGGGTAGAGCAGAAGCAAGCTTGCAAGC  350

seq1  CCCAGGCCAATCAGGAGTGTCTCAAAACACAAGCAAAAACCACAGCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCCAATCAGGAGTGTCTCAAAACACAAGCAAAAACCACAGCTGGG  400

seq1  AACAGTCAAAGATGCAGAAGTTAGTAACAGTAGCTTCTCCTAAGAGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCAAAGATGCAGAAGTTAGTAACAGTAGCTTCTCCTAAGAGTGGG  450

seq1  AAATGTACTTTCTATGGTCTTTTGTGATTTCATCCCAGTGTTTTAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACTTTCTATGGTCTTTTGTGATTTCATCCCAGTGTTTTAGACAG  500

seq1  GGTATCACTGTGTAAGCCACGATAGCCTACAATTCACAGTGTTCCTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCACTGTGTAAGCCACGATAGCCTACAATTCACAGTGTTCCTGCCT  550

seq1  TGGCAGTCATTAGAAGTCCAATGCTTTTATTTTAAGGTATTAGAGACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCATTAGAAGTCCAATGCTTTTATTTTAAGGTATTAGAGACTGG  600

seq1  AGTGTAGCTGTATAATAATGATAACACCACCAGAAGCACCACAGAGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGCTGTATAATAATGATAACACCACCAGAAGCACCACAGAGACAT  650

seq1  GCCTGGTGCCAAGGGTAACAACTGTGCAGAGCCAGTGTGTAGCTCACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGCCAAGGGTAACAACTGTGCAGAGCCAGTGTGTAGCTCACATC  700

seq1  TGTCTGCTTTCTAGTAGGGATCCTGGAGCTGCCTTGGGCAACTATAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTTCTAGTAGGGATCCTGGAGCTGCCTTGGGCAACTATAAGAG  750

seq1  CCGGTTACCACTGAGTTTCACTGCCACCTGAACTGCATCGCTCAGCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTTACCACTGAGTTTCACTGCCACCTGAACTGCATCGCTCAGCCAGG  800

seq1  TCTCCATGCCATCGTAGATGAGATGTACCATGTGGAGTGGACTCCACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGCCATCGTAGATGAGATGTACCATGTGGAGTGGACTCCACATT  850

seq1  CTATGACACTGCCTTTCCTGTTGGCTTCTTATTGCCCTGCCCACTTCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGACACTGCCTTTCCTGTTGGCTTCTTATTGCCCTGCCCACTTCCTC  900

seq1  CTCTCACCCTGTTTTTAAACTGCTGGCCGTGAATCTTTTTCTTTTCTTTT  950
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  CTCTCACCCTG-TTTTAAACTGCTGGCCGTGAATCTTTTTC-TTTCTTTT  948

seq1  TTTTTTTATGTTTTTTGATCCATTTTGAATTATTATTTTTTCTTGGATAT  1000
      |||||||||| |||||||||||||||||  ||||| |||||||| |||||
seq2  TTTTTTTATG-TTTTTGATCCATTTTGA--TATTA-TTTTTCTT-GATAT  993

seq1  TTTCATTATTTACATTTCAAATGTTTTCCCTTTTCCAGGTCTCCCCTTCA  1050
      ||||||   |||||||   |||| |||||||||||   |||||||  |||
seq2  TTTCAT--ATTACATT--CAATG-TTTCCCTTTTC--AGTCTCCC--TCA  1034

seq1  GAAACTCCCTATCCCATCCCCCCTCCCCCTGCCTCTATGAGGGTGATCCT  1100
      | |||| ||||||||||||||    |||||| || |||||||||||||||
seq2  G-AACTTCCTATCCCATCCCC---TCCCCTG-CTTTATGAGGGTGATCCT  1079

seq1  CCAACCACCCATTCTCATCC-TCCCGCTCTGTT  1132
      |||| |||| |||||||||| ||||||||||||
seq2  CCAA-CACCAATTCTCATCCTTCCCGCTCTGTT  1111