BAC Information

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BAC

Clone NameB6Ng01-153F03
Chromosome2 (Build37)
Map Location 10,069,302 - 10,220,082
singlet/doubletdoublet
Overlap geneItih5
Upstream geneLOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2
Downstream geneSfmbt2, LOC100040690, LOC100040703, LOC667192, Prkcq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153F03.bB6Ng01-153F03.g
ACCDH948668DH948669
length5361,082
definitionDH948668|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F03, 5' end.DH948669|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,069,302 - 10,069,837)(10,218,997 - 10,220,082)
sequence
caagtcaaggccaagactgtgctttggagtaccagtgctgttctaagtgt
ctgtcattttctcagtgttgtgaccaaatacctgcaaagacttaaggtag
aagagtttattttggttatgcttcaagggacatagttcatcatggtgggg
aagggaagggacacagttcacatggcctccacagtcaggaagcatacaga
gagagagagagagatagagagatagacactaatactcagctcgtgctctc
tctctccctccctccctccctccctccctttctctctttctttctttcct
tccttcctcccaacccctcttttttttttttttttttttttttttttttt
tttttttttttttgggttttgaaaaaaggggttccccggatagctctggt
tgtcctggaactcactttgtaaacccgggtggcccccaaatcaaaaaatc
acctgcccctgccccccaaaggtgggattaaaggggggtgcccccctggg
cgggtctcccctcccctctttctttttctttctctc
gaattccatatcactctcgttgttagaatgtcaaaattggtgtaaaatat
ataggggcttggggtattctgttttctgtcactgaaaagaaatgtcacgt
gttgaaatccatttacatttacagtgatatgtatttataatgatgtaaga
ttacccccaccaccactaccaaatgcgtgtgtggtgttagcctgtcattg
ctgtgactccacttgacaaaagcgacctgaggtgacagggatttatcttg
gctccggttttagggcatcatcaatcatggtgaggaaagcttggaagcag
gaccggctcacgactgtggaggctggagtgtgaggtggcttccttacaaa
tcaggggttcaagaagcagccgcagaaccaggactgaaccagcactaggc
gataacccaacccacagcccccatccccagcgagccacgggggcccatct
ttaagattccacagcccttgaagtaggcattacaagctgaggaccgagta
ttcaaacatgggagcccgtgtaggacatttccgacaactctaagtgcagt
ttgaaaggatgaggagtgtaagtgtgctgagtggctaagggagagctgcc
tggggctgactcccaagggtagctctccgggctgtttgacttggcacgct
gtgggatccttcagggtaaccattgcccttccttgctcgtttcccagatg
tgaagagaagaaaggagggggtcatttccctgatggtccattttttaaca
aaagcgcttccaggtttctaaggttttcattcctcaagctaaaggtgact
tggtaagtgtgggccagccatcttctctctctgtgaggcagacatgccac
acatcggattcttactcaaaactgaaatgatttttcattcattcgaagat
gaaaattcagcacccagtgccctgggataaagaaatttagtttcatttgg
ttttaccagatcatacctcgcctggtccgtgctaaattgctggtggagtt
taagcagagtaaatatgattcctctacaccctcctctggcgtacttctga
tgaaacttcttagcctgagtgtatggactcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_10069302_10069837
seq2: B6Ng01-153F03.b_50_591

seq1  GAATTCCAAGTCAAGGCCAAGACTGTGCTTTGGAGTACCAGTGCTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTCAAGGCCAAGACTGTGCTTTGGAGTACCAGTGCTGTTCT  50

seq1  AAGTGTCTGTCATTTTCTCAGTGTTGTGACCAAATACCTGCAAAGACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCTGTCATTTTCTCAGTGTTGTGACCAAATACCTGCAAAGACTTA  100

seq1  AGGTAGAAGAGTTTATTTTGGTTATGCTTCAAGGGACATAGTTCATCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAAGAGTTTATTTTGGTTATGCTTCAAGGGACATAGTTCATCATG  150

seq1  GTGGGGAAGGGAAGGGACACAGTTCACATGGCCTCCACAGTCAGGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAAGGGAAGGGACACAGTTCACATGGCCTCCACAGTCAGGAAGCA  200

seq1  TACAGAGAGAGAGAGAGAGATAGAGAGATAGACACTAATACTCAGCTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGAGAGAGAGAGAGATAGAGAGATAGACACTAATACTCAGCTCGT  250

seq1  GCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCTCTTTCTTTC  300

seq1  TTTCCTTCCTTCCTCCCAACCCCTCTTTTTTTTTTTTTTTTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCTTCCTCCCAACCCCTCTTTTTTTTTTTTTTTTTTTTTTTTT  350

seq1  TTTTTTTTTTTTTTTTTTTGGTTTTTGAAGACAGGGTTTCCCTGTATAGC  400
      ||||||||||||||||||||| ||||||| | |||| ||||| | |||||
seq2  TTTTTTTTTTTTTTTTTTTGGGTTTTGAAAAAAGGGGTTCCCCGGATAGC  400

seq1  TCTGGTTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG  450
      ||||||||||||||||||||||||||| ||| || ||||| | || ||| 
seq2  TCTGGTTGTCCTGGAACTCACTTTGTAAACCCGGGTGGCCCCCAAATCAA  450

seq1  AAATTCACCTGCCTCTGCCTCCGAATGCTGGGATTAAAGGTGTGTGCCAC  500
      ||| ||||||||| ||||| || || | |||||||||||| | ||||| |
seq2  AAAATCACCTGCCCCTGCCCCCCAAAGGTGGGATTAAAGGGGGGTGCCCC  500

seq1  CATGGCCGGCTCTCCCTTCCCCTC------TTTCTTTCTCTC  536
      | ||| ||| |||||| |||||||      ||||||||||||
seq2  CCTGGGCGGGTCTCCCCTCCCCTCTTTCTTTTTCTTTCTCTC  542

seq1: chr2_10218997_10220082
seq2: B6Ng01-153F03.g_69_1150 (reverse)

seq1  TGGAGTCCATAAACATCAGGCTAAGAAGTGTTCATCTAGAAGTACCCCAG  50
      ||||||||||| || |||||||||||||| |||||| |||||||| ||||
seq2  TGGAGTCCATACAC-TCAGGCTAAGAAGT-TTCATC-AGAAGTACGCCAG  47

seq1  AAGGAGGTGGTAAAGGAATCTATATTTTACTCTGCTTAAACTTCACCAGC  100
       ||||||  ||| ||||||| ||| ||||||||||||||||| |||||||
seq2  -AGGAGGGTGTAGAGGAATC-ATA-TTTACTCTGCTTAAACTCCACCAGC  94

seq1  AATCTAGCACGGACAAGGCGAGGTATGATCTTGTTAAAAGCAAATGAAAT  150
      ||| |||||||||| ||||||||||||||| || ||||| ||||||||| 
seq2  AATTTAGCACGGACCAGGCGAGGTATGATC-TGGTAAAACCAAATGAAAC  143

seq1  TAAATTTCTTTATCCCAGGGC-CTGGGTGCTGAATTTTCATCTTCGAATG  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAAATTTCTTTATCCCAGGGCACTGGGTGCTGAATTTTCATCTTCGAATG  193

seq1  AATG-AAAATCATTTCAGTTTTGAGTAAGAAT-CGATGTGTGGCATGTCT  247
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATGAAAAATCATTTCAGTTTTGAGTAAGAATCCGATGTGTGGCATGTCT  243

seq1  GCCTCACAGAGAGAGAAGATGGCTGGCCCACACTTACCAAGTCACCTTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAGAGAGAGAAGATGGCTGGCCCACACTTACCAAGTCACCTTTA  293

seq1  GCTTGAGGAATGAAAACCTTAGAAACCTGGAAGCGCTTTTGTTAAAAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGGAATGAAAACCTTAGAAACCTGGAAGCGCTTTTGTTAAAAAAT  343

seq1  GGACCATCAGGGAAATGACCCCCTCCTTTCTTCTCTTCACATCTGGGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATCAGGGAAATGACCCCCTCCTTTCTTCTCTTCACATCTGGGAAA  393

seq1  CGAGCAAGGAAGGGCAATGGTTACCCTGAAGGATCCCACAGCGTGCCAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCAAGGAAGGGCAATGGTTACCCTGAAGGATCCCACAGCGTGCCAAG  443

seq1  TCAAACAGCCCGGAGAGCTACCCTTGGGAGTCAGCCCCAGGCAGCTCTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGCCCGGAGAGCTACCCTTGGGAGTCAGCCCCAGGCAGCTCTCC  493

seq1  CTTAGCCACTCAGCACACTTACACTCCTCATCCTTTCAAACTGCACTTAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCACTCAGCACACTTACACTCCTCATCCTTTCAAACTGCACTTAG  543

seq1  AGTTGTCGGAAATGTCCTACACGGGCTCCCATGTTTGAATACTCGGTCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCGGAAATGTCCTACACGGGCTCCCATGTTTGAATACTCGGTCCT  593

seq1  CAGCTTGTAATGCCTACTTCAAGGGCTGTGGAATCTTAAAGATGGGCCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGTAATGCCTACTTCAAGGGCTGTGGAATCTTAAAGATGGGCCCC  643

seq1  CGTGGCTCGCTGGGGATGGGGGCTGTGGGTTGGGTTATCGCCTAGTGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCTCGCTGGGGATGGGGGCTGTGGGTTGGGTTATCGCCTAGTGCTG  693

seq1  GTTCAGTCCTGGTTCTGCGGCTGCTTCTTGAACCCCTGATTTGTAAGGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTCCTGGTTCTGCGGCTGCTTCTTGAACCCCTGATTTGTAAGGAA  743

seq1  GCCACCTCACACTCCAGCCTCCACAGTCGTGAGCCGGTCCTGCTTCCAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCACACTCCAGCCTCCACAGTCGTGAGCCGGTCCTGCTTCCAAG  793

seq1  CTTTCCTCACCATGATTGATGATGCCCTAAAACCGGAGCCAAGATAAATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCACCATGATTGATGATGCCCTAAAACCGGAGCCAAGATAAATC  843

seq1  CCTGTCACCTCAGGTCGCTTTTGTCAAGTGGAGTCACAGCAATGACAGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCACCTCAGGTCGCTTTTGTCAAGTGGAGTCACAGCAATGACAGGC  893

seq1  TAACACCACACACGCATTTGGTAGTGGTGGTGGGGGTAATCTTACATCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCACACACGCATTTGGTAGTGGTGGTGGGGGTAATCTTACATCAT  943

seq1  TATAAATACATATCACTGTAAATGTAAATGGATTTCAACACGTGACATTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATACATATCACTGTAAATGTAAATGGATTTCAACACGTGACATTT  993

seq1  CTTTTCAGTGACAGAAAACAGAATACCCCAAGCCCCTATATATTTTACAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTGACAGAAAACAGAATACCCCAAGCCCCTATATATTTTACAC  1043

seq1  CAATTTTGACATTCTAACAACGAGAGTGATATGGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGACATTCTAACAACGAGAGTGATATGGAATTC  1082