BAC Information

Click to search

BAC

Clone NameB6Ng01-154E09
Chromosome2 (Build37)
Map Location 80,331,750 - 80,331,937
singlet/doubletsinglet
Overlap genenone
Upstream geneSsfa2, Ppp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb
Downstream geneNckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154E09.bB6Ng01-154E09.g
ACCDH949362DH949363
length1,111187
definitionDH949362|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E09, 5' end.DH949363|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttggctctatacctcatttttaaaagagttatttgattg
tctggagtctaacttcttgagttccttgtatatattgactattagcctac
tatctgatgtaggactggtaaaaatcttttcccaatctgttctattgaca
gtgtccttttccttacagatgatttgcaattttatgaggtcccatttgtc
aattcttggtcttagagcacaaaccattggtgtgatgttcaggaaattat
cacatgtattcaaggctcttccccactttctcttctactagtttcactgt
attgggttttatgtggaggttcttgatccacatggatttgacctttgtac
aaggagataagaatggatcaattcacattcttctacatgctaactgccag
ttgtgccagcaccatttgttgaaaatgctgacttttcttccactggatgg
ttttagctcctttgtcaaagatcaagtgaccataggtatgtgggtacact
tttgggtcttcagttctattccattgatctatctgcctttcactgtacca
ataccatgaagttttggtttttgtttttgattttttatttttttgttttt
gttcgtttgtttgttttatcatgattgctctgtagtacagtttgatgatt
ccaccagaagttcttttactgttgaaaatagtttttgctatcctgggtta
tttgttattccatgtgaatttgcaaattgctctttctaactctatgaaga
attgagttataattttgatggggattgcattgaatctgtagattgctttc
agcaagatggccattttttactatattaatcctgccaatccatgagcatg
ggaatctttccatcttctgagatctttgatttcttttcttcagagacata
aggtcttatcctacagatctttcacttgagtcacaccaaggtattttata
ttatttgtgactatgtgaagggtatgtttccctaaattttctcccagtct
gttagctttgatgaggaggcaactgatttgtttgtgtttatttctattca
gcactttgctaagtgtttatttgctaggagttctttgggggatatttggg
ggcctatgatt
ctgatctttccaaaacttttatcctgaaggggtgttgggtttgtcaagtg
ctttctcagcatctaacaagatgatcatatgatttttgtctttgagtttg
tttatatagtggattacgttgatggatttccatatagtaaaccatccctg
catccctgggatgaagcctacttggtcatgatggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80331750_80331937
seq2: B6Ng01-154E09.g_72_258 (reverse)

seq1  CATCCATCCTGACCAAGTAGGTTTCATTCCAGGGATGCAGGGATGGTTTA  50
      |||||||| |||||||||||| ||||| ||||||||||||||||||||||
seq2  CATCCATCATGACCAAGTAGGCTTCATCCCAGGGATGCAGGGATGGTTTA  50

seq1  ATATATGGAAATTCATCAACGTAATCCACTATATAAACAAACTCAAAGAC  100
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTATATGGAAATCCATCAACGTAATCCACTATATAAACAAACTCAAAGAC  100

seq1  AAAAACCACATGATCATCTCGTTAGATGCGGAGAAAGCATTTGACAAAAT  150
      ||||| || |||||||||| ||||||||| ||||||||| ||||| ||| 
seq2  AAAAATCATATGATCATCTTGTTAGATGCTGAGAAAGCACTTGAC-AAAC  149

seq1  CTAACACCCATTCATGATAAAAGCCTTGGAAAGATCAG  188
      | ||||||| |||| ||||||||  |||||||||||||
seq2  CCAACACCCCTTCAGGATAAAAGTTTTGGAAAGATCAG  187