BAC Information

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BAC

Clone NameB6Ng01-155K23
Chromosome2 (Build37)
Map Location 152,510,320 - 152,664,728
singlet/doubletdoublet
Overlap geneH13, Mcts2, Id1, LOC629170, Cox4i2, Bcl2l1
Upstream geneBC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1
Downstream geneTpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155K23.bB6Ng01-155K23.g
ACCDH950398DH950399
length1,1171,132
definitionDH950398|Mus musculus domesticus DNA, BAC clone: B6Ng01-155K23, 5' end.DH950399|Mus musculus domesticus DNA, BAC clone: B6Ng01-155K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,663,616 - 152,664,728)(152,510,320 - 152,511,458)
sequence
gaattcaggaccttcggaagagcagtctgtgctcttaaccactgagccat
atctccagcccttatttatttatttattttggtttttcgagacagggttt
ctctgtatagccctggctgtcctggaactcattttgtagaccaggctggc
ctcgaactcagaaatccacctgcctctgcctcccgagtgctgggattaaa
ggcgttcgctaaagtagtggcagaggctggagagatagctcagtgatcag
aagtacttactgttcttctagaggacctgggtttgatacctagcatccac
atggaagcaaatggaattactaactgtaactccacttccaagaggtctga
tgctctcatctggcttctgcaggcaccaagctctctcatggtacacagat
aagcatgtgggtaaaacacccatacacataataaaaataatttaaaaaaa
aatcacttttagccaagttgcagtggtacacacctttaaccctagcactc
agactagggcagatgaatctctgtgaattttatgccagtctggtctatag
ggaacagctaaggctaaacagagaagccctgtctcaacaaaacaaaaagt
aagcagtggtagaatttgagggtgggcaggaaaagtgtagtcctccctgc
tgcacaataaagccttcaagttcattgtaataagtagacaatagatagat
aggcaagtagatagatacagatatagacagacagacagataaagtaatgg
tagagacaggtttacttattttacagggaaattggcatgtactaaaaggc
cagccatgaagcctaatacagtagtacatgcctttaattccaggccaggg
agacaggaaaattgatcttctgtgagttatcagccattttggtctacata
gtggagagagtctatttagtcttggcttgtcctataacctaatgtatagt
ctcaggctgggctcaaattcttagagatcttttgcctctgcctccgcttc
tgctttctgactggctgggattagaagcatgcactagtccagcttatttt
caaattctctaatttttaaggccaagaatgaaggttttctttggtttttt
ttaaacaagcggtggtg
gaattccagcacttgggagacagaagcagaaggattgttgcaaatttgag
gcaggtctgagctgtagagtgagactcttagcacaaacagtaatcctctg
agagaggtattacaatatggtgattgtaataaggtatctaataactcgga
tacagaaagagttgcatggagcagttgttgtaactttgccaagatcatac
ctctgagaagtggcagagatgggacttgaacctaggaatcatgtctccag
tctattctgctgattaaaaacaccgaattctgaagaggctaggtagggtg
agtgttccagctcctcacactgctctctgctctgcctctgcctgtgtctg
cacttgtgccatgccttcacccttcctcacattcagcagactgagcccct
cgccttggctgtcctggctgagtctgccttccgtgggtgctcactctatg
ccctgtacccgtctcttctctgcctctgataatattcattatcaaccact
tcacacagtctgcaaaggatcaggcccagaggtgactcttaaattcctat
tctccaagccaccagaaattaaaaacaaacaaagaaccagaactctctta
tccatgccttgtccattgtgacctagatgtttccagacctaccttggttc
gcttcttggttgggaagccatcctgggatgccttctatgacatatgttca
tagctcttaagcatccctgctacaggccagcactgacctggacatctttc
ctgcttatttcatcttcacaaacttctttgagacaggcagaagggttgta
accctcacacataggtaaggaacccagagcccagagaggctatcactaat
gtaacccccacaggactgcaatattctcacacccacaaccaagaggcctt
ggtttgctggtcttgctctaacataatctgggaaagaccatctctgttcc
ctgcctggcaggatatggagcatgctgggtaaactgttttaaagttacgc
tgtcttggcaacagagacttcatagcagcaaaaaaataacgttcctccct
tatgggcgggctcacctgcccaaagaactcccctaatatttgtttaagcc
agtcgggttgtctgatcagcacgcatggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152663616_152664728
seq2: B6Ng01-155K23.b_49_1165 (reverse)

seq1  CACCACCCCTTGTTTAAAAAAAACCAAA-AAAACCTTCATTCTTGGC--T  47
      ||||||| |||||||||||||||||||| ||||||||||||||||||  |
seq2  CACCACCGCTTGTTTAAAAAAAACCAAAGAAAACCTTCATTCTTGGCCTT  50

seq1  AAAAATATGAGAAATAGGAAATAAAGCTGGGCTTGGTAGCATGCTTCTAA  97
      ||||||  ||||| | | |||| ||||||| || |   ||||||||||||
seq2  AAAAATTAGAGAATTTGAAAAT-AAGCTGGACTAG--TGCATGCTTCTAA  97

seq1  TCCCAGCAAGTCAG-AAGCAGAAGCGGAGGCAGAGGCAGGAGGATCTCTA  146
      ||||||| |||||| |||||||||||||||||||||||  | ||||||||
seq2  TCCCAGCCAGTCAGAAAGCAGAAGCGGAGGCAGAGGCA-AAAGATCTCTA  146

seq1  AGAATTTGAGGCCAGCCTG-GACTATACATTGAGTTATAGGAC-AGCCAG  194
      |||||||||| |||||||| |||||||||||  |||||||||| ||||| 
seq2  AGAATTTGAGCCCAGCCTGAGACTATACATTAGGTTATAGGACAAGCCAA  196

seq1  GACTAAATAGACTCTCT-CACTATGTAGACCAGAATGGCTGGTAACTCAC  243
      ||||||||||||||||| |||||||||||||| |||||||| ||||||||
seq2  GACTAAATAGACTCTCTCCACTATGTAGACCAAAATGGCTGATAACTCAC  246

seq1  AG-AGATCAATTTTCCTGTCTCCCTGGCCTGGAATTAAAGGCATGTACTA  292
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATCAATTTTCCTGTCTCCCTGGCCTGGAATTAAAGGCATGTACTA  296

seq1  CTGTATTAGGCTTCATGGCTGGCCTTTTAGTACATGCCAATTTCCCTGTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTAGGCTTCATGGCTGGCCTTTTAGTACATGCCAATTTCCCTGTA  346

seq1  AAATAAGTAAACCTGTCTCTACCATTACTTTATCTGTCTGTCTGTCTATA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTAAACCTGTCTCTACCATTACTTTATCTGTCTGTCTGTCTATA  396

seq1  TCTGTATCTATCTACTTGCCTATCTATCTATTGTCTACTTATTACAATGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCTATCTACTTGCCTATCTATCTATTGTCTACTTATTACAATGA  446

seq1  ACTTGAAGGCTTTATTGTGCAGCAGGGAGGACTACACTTTTCCTGCCCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGGCTTTATTGTGCAGCAGGGAGGACTACACTTTTCCTGCCCAC  496

seq1  CCTCAAATTCTACCACTGCTTACTTTTTGTTTTGTTGAGACAGGGCTTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTCTACCACTGCTTACTTTTTGTTTTGTTGAGACAGGGCTTCT  546

seq1  CTGTTTAGCCTTAGCTGTTCCCTATAGACCAGACTGGCATAAAATTCACA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAGCCTTAGCTGTTCCCTATAGACCAGACTGGCATAAAATTCACA  596

seq1  GAGATTCATCTGCCCTAGTCTGAGTGCTAGGGTTAAAGGTGTGTACCACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCATCTGCCCTAGTCTGAGTGCTAGGGTTAAAGGTGTGTACCACT  646

seq1  GCAACTTGGCTAAAAGTGATTTTTTTTTAAATTATTTTTATTATGTGTAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGGCTAAAAGTGATTTTTTTTTAAATTATTTTTATTATGTGTAT  696

seq1  GGGTGTTTTACCCACATGCTTATCTGTGTACCATGAGAGAGCTTGGTGCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTTACCCACATGCTTATCTGTGTACCATGAGAGAGCTTGGTGCC  746

seq1  TGCAGAAGCCAGATGAGAGCATCAGACCTCTTGGAAGTGGAGTTACAGTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGCCAGATGAGAGCATCAGACCTCTTGGAAGTGGAGTTACAGTT  796

seq1  AGTAATTCCATTTGCTTCCATGTGGATGCTAGGTATCAAACCCAGGTCCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTCCATTTGCTTCCATGTGGATGCTAGGTATCAAACCCAGGTCCT  846

seq1  CTAGAAGAACAGTAAGTACTTCTGATCACTGAGCTATCTCTCCAGCCTCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGAACAGTAAGTACTTCTGATCACTGAGCTATCTCTCCAGCCTCT  896

seq1  GCCACTACTTTAGCGAACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTACTTTAGCGAACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGC  946

seq1  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAATGAGTTCCAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAATGAGTTCCAG  996

seq1  GACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAATAAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAATAAAT  1046

seq1  AAATAAATAAGGGCTGGAGATATGGCTCAGTGGTTAAGAGCACAGACTGC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAGGGCTGGAGATATGGCTCAGTGGTTAAGAGCACAGACTGC  1096

seq1  TCTTCCGAAGGTCCTGAATTC  1113
      |||||||||||||||||||||
seq2  TCTTCCGAAGGTCCTGAATTC  1117

seq1: chr2_152510320_152511458
seq2: B6Ng01-155K23.g_67_1198

seq1  GAATTCCAGCACTTGGGAGACAGAAGCAGAAGGATTGTTGCAAATTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACTTGGGAGACAGAAGCAGAAGGATTGTTGCAAATTTGAG  50

seq1  GCAGGTCTGAGCTGTAGAGTGAGACTCTTAGCACAAACAGTAATCCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTGAGCTGTAGAGTGAGACTCTTAGCACAAACAGTAATCCTCTG  100

seq1  AGAGAGGTATTACAATATGGTGATTGTAATAAGGTATCTAATAACTCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTATTACAATATGGTGATTGTAATAAGGTATCTAATAACTCGGA  150

seq1  TACAGAAAGAGTTGCATGGAGCAGTTGTTGTAACTTTGCCAAGATCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAAGAGTTGCATGGAGCAGTTGTTGTAACTTTGCCAAGATCATAC  200

seq1  CTCTGAGAAGTGGCAGAGATGGGACTTGAACCTAGGAATCATGTCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAAGTGGCAGAGATGGGACTTGAACCTAGGAATCATGTCTCCAG  250

seq1  TCTATTCTGCTGATTAAAAACACCGAATTCTGAAGAGGCTAGGTAGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCTGCTGATTAAAAACACCGAATTCTGAAGAGGCTAGGTAGGGTG  300

seq1  AGTGTTCCAGCTCCTCACACTGCTCTCTGCTCTGCCTCTGCCTGTGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCAGCTCCTCACACTGCTCTCTGCTCTGCCTCTGCCTGTGTCTG  350

seq1  CACTTGTGCCATGCCTTCACCCTTCCTCACATTCAGCAGACTGAGCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTGCCATGCCTTCACCCTTCCTCACATTCAGCAGACTGAGCCCCT  400

seq1  CGCCTTGGCTGTCCTGGCTGAGTCTGCCTTCCGTGGGTGCTCACTCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGGCTGTCCTGGCTGAGTCTGCCTTCCGTGGGTGCTCACTCTATG  450

seq1  CCCTGTACCCGTCTCTTCTCTGCCTCTGATAATATTCATTATCAACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTACCCGTCTCTTCTCTGCCTCTGATAATATTCATTATCAACCACT  500

seq1  TCACACAGTCTGCAAAGGATCAGGCCCAGAGGTGACTCTTAAATTCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGTCTGCAAAGGATCAGGCCCAGAGGTGACTCTTAAATTCCTAT  550

seq1  TCTCCAAGCCACCAGAAATTAAAAACAAACAAAGAACCAGAACTCTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGCCACCAGAAATTAAAAACAAACAAAGAACCAGAACTCTCTTA  600

seq1  TCCATGCCTTGTCCATTGTGACCTAGATGTTTCCAGACCTACCTTGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCTTGTCCATTGTGACCTAGATGTTTCCAGACCTACCTTGGTTC  650

seq1  GCTTCTTGGTTGGGAAGCCATCCTGGGATGCCTTCTATGACATATGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTGGTTGGGAAGCCATCCTGGGATGCCTTCTATGACATATGTTCA  700

seq1  TAGCTCTTAAGCATCCCTGCTACAGGCCAGCACTGACCTGGACATCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTAAGCATCCCTGCTACAGGCCAGCACTGACCTGGACATCTTTC  750

seq1  CTGCTTATTTCATCTTCACAAACTTCTTTGAGACAGGCAGAAGGGTTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTATTTCATCTTCACAAACTTCTTTGAGACAGGCAGAAGGGTTGTA  800

seq1  ACCCTCACACATAGGTAAGGAACCCAGAGCCCAGAGAGGCTATCACTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCACACATAGGTAAGGAACCCAGAGCCCAGAGAGGCTATCACTAAT  850

seq1  GTAACCCCCACAGGACTGCAATATTCTCACACCCACAACCAAGAGGCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCCCACAGGACTGCAATATTCTCACACCCACAACCAAGAGGCCTT  900

seq1  GGTTTGCTGGTCTTGCTCTAACATAATCTGGGAAAGACCATCTCTGTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCTGGTCTTGCTCTAACATAATCTGGGAAAGACCATCTCTGTTCC  950

seq1  CTGCCTGGCCAGGATATGGAGCATGCTGGGTAAAACTGTTTTTAAAGTTA  1000
      |||||||| |||||||||||||||||||||| |||||| |||||||||||
seq2  CTGCCTGG-CAGGATATGGAGCATGCTGGGT-AAACTG-TTTTAAAGTTA  997

seq1  CGCTTGTCCTGGGCAACAGAGACTTCATAGCAGGCATAAAAATAACGTTC  1050
      ||| ||| || ||||||||||||||||||||| ||| |||||||||||||
seq2  CGC-TGT-CTTGGCAACAGAGACTTCATAGCA-GCAAAAAAATAACGTTC  1044

seq1  CTCCCCTATGGGCTGTGGCTCACCTGCCTCATAGATCTCCACT-ATATTT  1099
      ||||| |||||||   |||||||||||| || ||| |||| || ||||||
seq2  CTCCCTTATGGGC--GGGCTCACCTGCC-CAAAGAACTCCCCTAATATTT  1091

seq1  GTATAAGCCCAGTCGTGTTGTCTGATCAGCA-GCAT-GAGAT  1139
      || |||| ||||||| ||||||||||||||| |||| |||||
seq2  GTTTAAG-CCAGTCGGGTTGTCTGATCAGCACGCATGGAGAT  1132