BAC Information

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BAC

Clone NameB6Ng01-155O02
Chromosome2 (Build37)
Map Location 68,294,803 - 68,295,756
singlet/doubletsinglet
Overlap geneStk39
Upstream geneCmya3, LOC621171, LOC227995, B3galt1
Downstream geneLOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O02.bB6Ng01-155O02.g
ACCDH950536DH950537
length9501,141
definitionDH950536|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O02, 5' end.DH950537|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagagaacaaatcacttcagccaatcaagcattactctaaaat
tagtttgtgtgtttgtttgttctacgcaaattacatgtgatagccctaaa
tgggggtggaaaaaagcaattcctaaaaatatcaattcacacttttcccc
ccagtttcagtttctgatttgtacctatcttgccaacaccaaacttcaaa
cagtgccctctggtccagagtgatacggtgactggtgactggtccccact
tttccttgtctgtgttacccaaggtttgcctaatggccatctaggatgac
ttacgagtacagtgttggggggagtttctaaaagtggagttatttatagc
cccggaggcatatttatagcctcagaatcatccttttctcgtgccttttc
ccttctgtgggaaaggggcaactggaccagtacaggacgggtcctccccc
agtcccatcttcacgtgtgcatctgtttaccctttgtagtacagatcact
tagcaccaagtctccagctttataaagaaggcacttagccctcttcctac
atctacaggccgttgctatttgaaaataagggtttaccaggaaagtctta
tcggtttatatagggtgaaaaaactgcacaactccttgcattctatgcct
gactggtacacaatagtgtaagcataaaggacagactctattaataagca
tttctagttttctaatcttaagagcctgtttagaagttctagccaggaag
agggcgagcagctgctcggataaccttgacagaagaaaggtcgtcttttc
tcctctggaagatctacctctttgacaagcctcagcttccgggggataaa
ggtaaatgtatggagaggtgagggagggcacaggtgagggagggacaagt
gcctagcatcatatcagcccattatcttgtaatagatgtcactgccaaat

gaattctgtaggattcttgtatgttcacgggcatctccttctttaggtta
gggaagttttttctataattttgttgaagatatttacaggccctttaagt
tgaaaatcttcattctcatctatacctattatccgtaggtttggtcttct
cattgtgtcctggatttcctggatgttttgagttatgatctttttcaatt
ttgcattttctttgattgttgtgtccatgttttgtatgaaatcttctgca
cctgagattctctcttctacctcttgtattctgttgctgatgctcacatc
tatggttcctaatttctttcctaggatttctatctccagagttgtctccc
tttgggttttcattgtttctacttccatttttagatcttggatggttttg
ttcaattgcatcacctgtttggttgtgttttcctgtagttctttaaggga
tttttgtgtttcctctttaaggtcttatacctgtttagcagtgttttcct
gtaattccttgagggatttttgtgcttcctctttaagggcttctacctgt
ttagcagtgttctcctgtatttctttaagtttattattaatgcccttctt
aaaatcctctaccagcattatgagatgtgtttttaaatctgaatctcgct
tttcgggtatgttgtggtatccaggactcgctgtggtgggcgtactgggt
tctgatgatgccaagtggtcttggtttctgttagtaagattcttatgttt
gcctttcaccatctggtaatttctggtgttagatgttctagctgtctctg
gctggagcttgttcctcctgtgattctgttagcctctgtcagcacttctg
ggagtccaactctctcctgagtcccagtagtcagatcactctctgaagtt
aagctctcctgttgcaggaaggtgcacagagctctggagctcagatccac
ctcctgactgagatgacggcccaaagggaccctgttcagacttctcttgc
ttctgttgcccagttgctctcctgcttggactggtttctgagagacccgg
gatgcagatggtactcctcacttgagttccgcatcgaagccctcctggaa
ggggactctctcccaatggatcctatgatctggggtggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_68294803_68295756
seq2: B6Ng01-155O02.b_42_991

seq1  GAATTCTCAGAGAACAAATCACTTCAGCCAATCAAGCATTACTCTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGAACAAATCACTTCAGCCAATCAAGCATTACTCTAAAAT  50

seq1  TAGTTTGTGTGTTTGTTTGTTCTACGCAAATTACATGTGATAGCCCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTGTGTTTGTTTGTTCTACGCAAATTACATGTGATAGCCCTAAA  100

seq1  TGGGGGTGGAAAAAAGCAATTCCTAAAAATATCAATTCACACTTTTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGGAAAAAAGCAATTCCTAAAAATATCAATTCACACTTTTCCCC  150

seq1  CCAGTTTCAGTTTCTGATTTGTACCTATCTTGCCAACACCAAACTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCAGTTTCTGATTTGTACCTATCTTGCCAACACCAAACTTCAAA  200

seq1  CAGTGCCCTCTGGTCCAGAGTGATACGGTGACTGGTGACTGGTCCCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCTCTGGTCCAGAGTGATACGGTGACTGGTGACTGGTCCCCACT  250

seq1  TTTCCTTGTCTGTGTTACCCAAGGTTTGCCTAATGGCCATCTAGGATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGTCTGTGTTACCCAAGGTTTGCCTAATGGCCATCTAGGATGAC  300

seq1  TTACGAGTACAGTGTTGGGGGGAGTTTCTAAAAGTGGAGTTATTTATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGTACAGTGTTGGGGGGAGTTTCTAAAAGTGGAGTTATTTATAGC  350

seq1  CCCGGAGGCATATTTATAGCCTCAGAATCATCCTTTTCTCGTGCCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGAGGCATATTTATAGCCTCAGAATCATCCTTTTCTCGTGCCTTTTC  400

seq1  CCTTCTGTGGGAAAGGGGCAACTGGACCAGTACAGGACGGGTCCTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGTGGGAAAGGGGCAACTGGACCAGTACAGGACGGGTCCTCCCCC  450

seq1  AGTCCCATCTTCACGTGTGCATCTGTTTACCCTTTGTAGTACAGATCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCATCTTCACGTGTGCATCTGTTTACCCTTTGTAGTACAGATCACT  500

seq1  TAGCACCAAGTCTCCAGCTTTATAAAGAAGGCACTTAGCCCTCTTCCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCAAGTCTCCAGCTTTATAAAGAAGGCACTTAGCCCTCTTCCTAC  550

seq1  ATCTACAGGCCGTTGCTATTTGAAAATAAGGGTTTACCAGGAAAGTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAGGCCGTTGCTATTTGAAAATAAGGGTTTACCAGGAAAGTCTTA  600

seq1  TCGGTTTATATAGGGTGAAAAAACTGCACAACTCCTTGCATTCTATGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTTATATAGGGTGAAAAAACTGCACAACTCCTTGCATTCTATGCCT  650

seq1  GACTGGTACACAATAGTGTAAGCATAAAGGACAGACTCTATTAATAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTACACAATAGTGTAAGCATAAAGGACAGACTCTATTAATAAGCA  700

seq1  TTTCTAGTTTTCTAATCTTAAGAGCCTGTTTAGAAGTTCTAGCCAGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTTTTCTAATCTTAAGAGCCTGTTTAGAAGTTCTAGCCAGGAAG  750

seq1  AGGGCGAGCAGCTGCTCGGATAACCTTGACAGAAGAAAGGTCGTCTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGAGCAGCTGCTCGGATAACCTTGACAGAAGAAAGGTCGTCTTTTC  800

seq1  TCCTCTGGAAGATCTACCTCTTTGACAAGCCTCAGCTTCCGGGGGATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGAAGATCTACCTCTTTGACAAGCCTCAGCTTCCGGGGGATAAA  850

seq1  GGTAAATGTATGGAGAGGTGAGGGAGGGCACAGGTGAGGGAGGGACAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGTAAATGTATGGAGAGGTGAGGGAGGGCACAGGTGAGGGAGGGACAAGT  900

seq1  GCCTAGCAGTCATATCAGCCCAATTAATCCTGTTAATAGATGTCACTGCC  950
      |||||||| |||||||||||||  | ||| || |||||||||||||||||
seq2  GCCTAGCA-TCATATCAGCCCA--TTATCTTG-TAATAGATGTCACTGCC  946

seq1  AAAT  954
      ||||
seq2  AAAT  950