BAC Information

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BAC

Clone NameB6Ng01-156F10
Chromosome2 (Build37)
Map Location 121,179,638 - 121,328,691
singlet/doubletdoublet
Overlap geneCkmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a
Upstream geneTmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a
Downstream geneWdr76, Frmd5, Casc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156F10.bB6Ng01-156F10.g
ACCDH950868DH950869
length1,1721,025
definitionDH950868|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F10, 5' end.DH950869|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,179,638 - 121,180,822)(121,327,669 - 121,328,691)
sequence
gaattctacactgggctaaagggcagtcttactgtggaaggaaaagaggg
aagggcttgggggggggcaaggaggcaatgtagggaacatggatactaca
tcagacctaaagaagggtatccagcaaggttgaactgtgactgctttagc
tcttaggattgagaacactcacatagttctctacttttctggaatcacct
tgcatttgagagaggctccaacaatggtaaataaaactatttacttctca
cagcactaccaatattagactttcccaccttcaaaagtgaacccccaagc
ctgtgcgcctcttttttactggttattttgaggcaaggtctcactccgta
gctcagacttgacctcaaactcagtctctcaagtgttgggattacaggca
tgaaccgttctgcctgcttccacttccttcctagggcaagtttttatgtt
tccgacatattccttattctgacacgagtttgctgcttcttctcactatc
agctcactcatcctaccctctctccccgcctgtgataatggctcttcact
gactccactagccttactccccaacctgactgctgcaccccaatcactaa
ttaatgcaatgaatccagccgattttcccactcagtgactcccagaagta
aacaacacttcaaacctgcacatgagtcatcacccttgttaacacttttt
ttaaaagacagaatctatgtagctcaagatagccttgaactcagaatcct
cttgcttcagcctccaaggtacacttggtagcatctttccgttaatgata
aacacttaatgatcccctatagcgcccgagggccgttccttcctcacact
agccttccaggaggttcacctcctctccaccgtaaccccagcattcagca
aaccctctccccggccagccagttccttccctcacctcccctacatccag
cccgctggaccttccttcccacggcttctagcgcacgaccctctacctcg
gcccctccctacaacccagtccctctcctcctccagagtcccagctctgc
cctgcaagcttcatcttccaggttctccttaataactcctgaaccctcca
cacccgtctgctctcccactggacccctcagccgtcctcctctcttcggg
ccgggtcccgaatccgccctcc
gaattcaggattctatctgcaaaagccaagaggtggagggagttagggaa
gaggatactgaaacatacattatctttcttgaccaggtgagatctcaatg
gaaaaggtgaaggtgaaacgatatgtgtccggaaagagaccagattatgc
ccctatggagtcctcagatgaagaggatgaagaatttcagttcattaaga
aagctaaggaacaagaagcagagcctgaggaacaggaggaggactcatcc
agtgacccccgacttcggcggttacagaaccgcatcagtgaagatgtgga
agagcgattggctcgacacagaaagatcgtggaacctgaagtagtgggag
agagcgactcagaagtagaaggggatgcttggcgcctggaacgagaagac
agcagtgaggaagaggaggaagagattgacgatgaagaaattgagcggcg
ccgtggcatgatgcgtcagcgagcacaggagaggaaaaatgaagagatgg
aagtcatggaggtggaagatgaagggcgctctggggaggagtctgagtca
gagtctgagtatgaggagtacacagacagtgaggatgaaatggagcctcg
acttaagcctgtcttcattcgaaagtaagtacctgccagacctgctgagc
caggctcaaactcccagaactcagtaggtttcgaccagcgggaactgtta
attcaaggccagcttaggctacagagttgcttcaaggaagcctggacaac
ttaagaataccctctgattctcaaagaggaaccaagagatataatagtca
aaccaaaggcagactccacataattttgttctaggtctgacaaaaaaggc
tctgtatcccgcatttcctgcagtgaaagtcttcccgatgctaggtgcat
gccagtgttgccagatgctagcagaaagccagagcttgtgcttatccccc
tttcaaattagaaggcatgtgtctgcctgaaggtatgggccgggtgaggg
tgggggtgcttgggtacttggaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121179638_121180822
seq2: B6Ng01-156F10.b_50_1221

seq1  GAATTCTACACTGGGCTAAAGGGCAGTCTTACTGTGGAAGGAAAAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACTGGGCTAAAGGGCAGTCTTACTGTGGAAGGAAAAGAGGG  50

seq1  AAGGGCTTGGGGGGGGGCAAGGAGGCAATGTAGGGAACATGGATACTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTGGGGGGGGGCAAGGAGGCAATGTAGGGAACATGGATACTACA  100

seq1  TCAGACCTAAAGAAGGGTATCCAGCAAGGTTGAACTGTGACTGCTTTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCTAAAGAAGGGTATCCAGCAAGGTTGAACTGTGACTGCTTTAGC  150

seq1  TCTTAGGATTGAGAACACTCACATAGTTCTCTACTTTTCTGGAATCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGATTGAGAACACTCACATAGTTCTCTACTTTTCTGGAATCACCT  200

seq1  TGCATTTGAGAGAGGCTCCAACAATGGTAAATAAAACTATTTACTTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGAGAGAGGCTCCAACAATGGTAAATAAAACTATTTACTTCTCA  250

seq1  CAGCACTACCAATATTAGACTTTCCCACCTTCAAAAGTGAACCCCCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTACCAATATTAGACTTTCCCACCTTCAAAAGTGAACCCCCAAGC  300

seq1  CTGTGCGCCTCTTTTTTACTGGTTATTTTGAGGCAAGGTCTCACTCCGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCGCCTCTTTTTTACTGGTTATTTTGAGGCAAGGTCTCACTCCGTA  350

seq1  GCTCAGACTTGACCTCAAACTCAGTCTCTCAAGTGTTGGGATTACAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACTTGACCTCAAACTCAGTCTCTCAAGTGTTGGGATTACAGGCA  400

seq1  TGAACCGTTCTGCCTGCTTCCACTTCCTTCCTAGGGCAAGTTTTTATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCGTTCTGCCTGCTTCCACTTCCTTCCTAGGGCAAGTTTTTATGTT  450

seq1  TCCGACATATTCCTTATTCTGACACGAGTTTGCTGCTTCTTCTCACTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACATATTCCTTATTCTGACACGAGTTTGCTGCTTCTTCTCACTATC  500

seq1  AGCTCACTCATCCTACCCTCTCTCCCCGCCTGTGATAATGGCTCTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTCATCCTACCCTCTCTCCCCGCCTGTGATAATGGCTCTTCACT  550

seq1  GACTCCACTAGCCTTACTCCCCAACCTGACTGCTGCACCCCAATCACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCACTAGCCTTACTCCCCAACCTGACTGCTGCACCCCAATCACTAA  600

seq1  TTAATGCAATGAATCCAGCCGATTTTCCCACTCAGTGACTCCCAGAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCAATGAATCCAGCCGATTTTCCCACTCAGTGACTCCCAGAAGTA  650

seq1  AACAACACTTCAAACCTGCACATGAGTCATCACCCTTGTTAACACTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACTTCAAACCTGCACATGAGTCATCACCCTTGTTAACACTTTTT  700

seq1  TTAAAAGACAGAATCTATGTAGCTCAAGATAGCCTTGAACTCAGAATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGACAGAATCTATGTAGCTCAAGATAGCCTTGAACTCAGAATCCT  750

seq1  CTTGCTTCAGCCTCCAAGGTACACTTGGTAGCATCTTTCCGTTAATGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCAGCCTCCAAGGTACACTTGGTAGCATCTTTCCGTTAATGATA  800

seq1  AACACTTAATGATCCCCTATAGCGCCCGAGGGCCGTTCCTTCCTCACACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTAATGATCCCCTATAGCGCCCGAGGGCCGTTCCTTCCTCACACT  850

seq1  AGCCTTCCAGGAGGTTCACCTCCTCTCCACCGTAACCCCAGCATTCAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCCAGGAGGTTCACCTCCTCTCCACCGTAACCCCAGCATTCAGCA  900

seq1  AACCCTCTCCCCGGCCAGCCAGTTCCTTCCCTCACCTCCCCTACATCCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCTCCCCGGCCAGCCAGTTCCTTCCCTCACCTCCCCTACATCCAG  950

seq1  CCCCGCTGGACCTTCCTTCCCACGGCTTCTAGCGCACGACCCTCTACCTC  1000
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CCCGCTGGACCTTCCTTCCCACGGCTTCTAGCGCACGACCCTCTACCTC  999

seq1  GGCCCCCTCCCCTACAACCCAGTCCCTCTCCTCCTCCCAGAGTCCCCAGC  1050
      ||||||   |||||||||||||||||||||||||| ||||||| ||||||
seq2  GGCCCC--TCCCTACAACCCAGTCCCTCTCCTCCT-CCAGAGT-CCCAGC  1045

seq1  TCTGCCCCTGCAAGCCTTCCATCTTCCCAGGTTCTCCTTATTACTCCCTT  1100
      |||| ||||||||||  | |||||| |||||||||||||| ||   ||| 
seq2  TCTG-CCCTGCAAGC--TTCATCTT-CCAGGTTCTCCTTAATAACTCCT-  1090

seq1  GGACCCCTCCACACCCGTCTGCTCTCCCACTGACCCCCTCGGCCGTCCTC  1150
       || ||||||||||||||||||||||||||||  |||||| |||||||||
seq2  -GAACCCTCCACACCCGTCTGCTCTCCCACTGGACCCCTCAGCCGTCCTC  1139

seq1  TCTCTCTCGGCGCCGGGTCACGAATCCCGCCCTCC  1185
       ||||||  | |||||||| ||||| |||||||||
seq2  -CTCTCTTCGGGCCGGGTCCCGAAT-CCGCCCTCC  1172

seq1: chr2_121327669_121328691
seq2: B6Ng01-156F10.g_68_1092 (reverse)

seq1  ATCTCCAAGTACCC-AGCA-CCCCACCCTCACCCGGCCCATTACCTTCAG  48
      || ||||||||||| |||| |||||||||||||||||||| |||||||||
seq2  ATTTCCAAGTACCCAAGCACCCCCACCCTCACCCGGCCCA-TACCTTCAG  49

seq1  GCAGACACATGCCTCTTAATTTGAAAGGGGGATATGCAACAAGCTCTGGC  98
      ||||||||||||||  |||||||||||||||||| || ||||||||||||
seq2  GCAGACACATGCCTTCTAATTTGAAAGGGGGATAAGC-ACAAGCTCTGGC  98

seq1  TTTCTGCTAGCATCTGGCAACACTGGCATGCACCTAGCATCGGGAAGACT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTAGCATCTGGCAACACTGGCATGCACCTAGCATCGGGAAGACT  148

seq1  TCCACTGCAGGAAATGCGGGATACAGAGCCTTTTTTGTCAGACCTAGAAC  198
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCAGGAAATGCGGGATACAGAGCCTTTTTTGTCAGACCTAGAAC  198

seq1  AAAATTATGTGGAGTCTGCC-TTGGTTTGACTATTATATCTCTTGGTTCC  247
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAATTATGTGGAGTCTGCCTTTGGTTTGACTATTATATCTCTTGGTTCC  248

seq1  TCTTTGAGAATCAGAGGGTATTCTTAAGTTGTCCAGGCTTCCTTGAAGCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGAATCAGAGGGTATTCTTAAGTTGTCCAGGCTTCCTTGAAGCA  298

seq1  ACTCTGTAGCCTAAGCTGGCCTTGAATTAACAGTTCCCGCTGGTCG-AAC  346
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTCTGTAGCCTAAGCTGGCCTTGAATTAACAGTTCCCGCTGGTCGAAAC  348

seq1  CTACTGAGTTCTGGGAGTTTGAGCCTGGCTCAGCAGGTCTGGCAGGTACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGTTCTGGGAGTTTGAGCCTGGCTCAGCAGGTCTGGCAGGTACT  398

seq1  TACTTTCGAATGAAGACAGGCTTAAGTCGAGGCTCCATTTCATCCTCACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCGAATGAAGACAGGCTTAAGTCGAGGCTCCATTTCATCCTCACT  448

seq1  GTCTGTGTACTCCTCATACTCAGACTCTGACTCAGACTCCTCCCCAGAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTACTCCTCATACTCAGACTCTGACTCAGACTCCTCCCCAGAGC  498

seq1  GCCCTTCATCTTCCACCTCCATGACTTCCATCTCTTCATTTTTCCTCTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCATCTTCCACCTCCATGACTTCCATCTCTTCATTTTTCCTCTCC  548

seq1  TGTGCTCGCTGACGCATCATGCCACGGCGCCGCTCAATTTCTTCATCGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCGCTGACGCATCATGCCACGGCGCCGCTCAATTTCTTCATCGTC  598

seq1  AATCTCTTCCTCCTCTTCCTCACTGCTGTCTTCTCGTTCCAGGCGCCAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTCCTCCTCTTCCTCACTGCTGTCTTCTCGTTCCAGGCGCCAAG  648

seq1  CATCCCCTTCTACTTCTGAGTCGCTCTCTCCCACTACTTCAGGTTCCACG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTTCTACTTCTGAGTCGCTCTCTCCCACTACTTCAGGTTCCACG  698

seq1  ATCTTTCTGTGTCGAGCCAATCGCTCTTCCACATCTTCACTGATGCGGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTGTGTCGAGCCAATCGCTCTTCCACATCTTCACTGATGCGGTT  748

seq1  CTGTAACCGCCGAAGTCGGGGGTCACTGGATGAGTCCTCCTCCTGTTCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACCGCCGAAGTCGGGGGTCACTGGATGAGTCCTCCTCCTGTTCCT  798

seq1  CAGGCTCTGCTTCTTGTTCCTTAGCTTTCTTAATGAACTGAAATTCTTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTGCTTCTTGTTCCTTAGCTTTCTTAATGAACTGAAATTCTTCA  848

seq1  TCCTCTTCATCTGAGGACTCCATAGGGGCATAATCTGGTCTCTTTCCGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCATCTGAGGACTCCATAGGGGCATAATCTGGTCTCTTTCCGGA  898

seq1  CACATATCGTTTCACCTTCACCTTTTCCATTGAGATCTCACCTGGTCAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATCGTTTCACCTTCACCTTTTCCATTGAGATCTCACCTGGTCAAG  948

seq1  AAAGATAATGTATGTTTCAGTATCCTCTTCCCTAACTCCCTCCACCTCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATGTATGTTTCAGTATCCTCTTCCCTAACTCCCTCCACCTCTT  998

seq1  GGCTTTTGCAGATAGAATCCTGAATTC  1023
      |||||||||||||||||||||||||||
seq2  GGCTTTTGCAGATAGAATCCTGAATTC  1025