BAC Information

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BAC

Clone NameB6Ng01-156K17
Chromosome2 (Build37)
Map Location 110,931,136 - 111,068,291
singlet/doubletdoublet
Overlap geneLOC668802, LOC623270, LOC623301, 4930430A15Rik
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneOlfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156K17.bB6Ng01-156K17.g
ACCDH951112DH951113
length1,1091,135
definitionDH951112|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K17, 5' end.DH951113|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,931,136 - 110,932,024)(111,067,154 - 111,068,291)
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatccaatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgattttacagcacaagctattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataatgaaacttttatgtctctggttttatgtggagttcc
ttaatccacttagatttgaccttagtacaaggagatagaaatggatcaat
ttgcatttttctacatgataaccgccagttgtgccagcaccatttgttga
aaatgctgtcttttttccactggatggttttagctaccttgtcaaagatc
aagtgaccataggtgtgtgtgttcatctctgggtcttcaattctgttcca
ttggtctacttgtctgtcactataccaataccatgcagtttttatcacaa
ttgctctgtagtacagctttaggtccggcatggtgattccaccagaggtt
ctttgatccttgagaagagtttttgctctcctaggttttttgttattcca
gatgaatctgctgattggcctttctaaagcatgatggtaatttagcacct
cttggtactttgtggttttacatagttttaaattgtaactgttcttgttt
gatgggcacatgactctgcatcttcagaaaaggaaccatggaactcatat
gtgcgagactctagcagaattcttagttgttacctaccttgaatttttct
gcttgtacctcagcagtaactatagtccttccagaaggaaatacttatca
tttaatgacatgtattataaagtatgaaatataacctatttttcccactg
aagaagttttaaacatatcctatttgttttcatacattgtttttgaaaaa
agaaaacaggtttctgatagactttaaatggatatttacgtacaatggct
ggtatattt
gaattctttgaacaagccatctgattttcggtatgctcctaggctgttca
aaactggacatatgaatgtgtgtgcatattattgaagcatggtgctgatc
caaaccgaaaggacaaaaatggcaatacttctcttcactacgctgtgtca
gaagataaccagacactcgccaaatgcttgcttaagtacagtgcaaacat
ggaacaaaagaacaaggtaatgttcaccccactatagttgccaaatattc
tgaaatatgtgtgtatgctaacagtaagagaggtaggattaactgtgcat
gttaaaaattcaagtgctcttgaatgaaaatattctgtcatagcttagtt
gtttgtttaacatgacttcaaatagggatttttaaaagagccatcagagc
atagaatgcttctgcattgaatattggaatattgctgttttgtatcaagg
taaaatttcttaatgttttctttttccaaaaaattagtttccaaattgtg
tgaggtaacacaattagagaacaaaactgcccttgctacattaataaaac
tttattaaaattcaaatgaaacaaaataatttgtgacaaaacctattgtt
gttgacaaataatatcaagtgatatatttctctatgttaagactgaatca
aggatgatagaaccagatcctgatcaatatgtaggcccatctcaaaatta
ggctattaaagggatacaagaagaattattactattttcaacttattatt
ttaatacttttttctttatttttatattttcttcatttacatttcaaatg
ctatcctcaaagaaccctataccctcccccaccgtgctccacaactcacc
cactcctgcttacttttaaaattttattttgatcacattctttccaacac
caactcctcacagactcccctcaaccacctttattttttttttttaccta
tccaatttcatgacctccttcacaaaaatagggaaaccagacacccacac
tctagagagcagagctgcttgaagatgagtttgtgtgtactgatacctgt
gctttctgtttggcaaacagccattgtgagttcgaacatgcctgcccagc
cttccacctgagaaaaactcggaggaatgacatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110931136_110932024
seq2: B6Ng01-156K17.b_272_1153

seq1  TTACAGCACAAGCTATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCACAAGCTATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCC  50

seq1  ATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATAATGAAACTTTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATAATGAAACTTTTATG  100

seq1  TCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTA  150

seq1  CAAGGAGATAGAAATGGATCAATTTGCATTTTTCTACATGATAACCGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGATAGAAATGGATCAATTTGCATTTTTCTACATGATAACCGCCA  200

seq1  GTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGG  250

seq1  TTTTAGCTACCTTGTCAAAGATCAAGTGACCATAGGTGTGTGTGTTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTACCTTGTCAAAGATCAAGTGACCATAGGTGTGTGTGTTCATC  300

seq1  TCTGGGTCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCACTATACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCACTATACCA  350

seq1  ATACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCCG  400

seq1  GCATGGTGATTCCACCAGAGGTTCTTTGATCCTTGAGAAGAGTTTTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGATTCCACCAGAGGTTCTTTGATCCTTGAGAAGAGTTTTTGCT  450

seq1  CTCCTAGGTTTTTTGTTATTCCAGATGAATCTGCTGATTGGCCTTTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGGTTTTTTGTTATTCCAGATGAATCTGCTGATTGGCCTTTCTAA  500

seq1  AGCATGATGGTAATTTAGCACCTCTTGGTACTTTGTGGTTTTTACATAGT  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGCATGATGGTAATTTAGCACCTCTTGGTACTTTGTGG-TTTTACATAGT  549

seq1  TTTAAATTGTAACTGTTCTTGTTTGATGGGCACATGACCCTGCATCTTCA  600
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTAAATTGTAACTGTTCTTGTTTGATGGGCACATGACTCTGCATCTTCA  599

seq1  GAAAAGGAACCATGGAACTCATATGTGCGAGACTCTAGCAGAATTCTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAACCATGGAACTCATATGTGCGAGACTCTAGCAGAATTCTTAG  649

seq1  TTGTTACCTACCTTGAATTTTTCTGCTTGTACCTCAGCAGTAACTATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACCTACCTTGAATTTTTCTGCTTGTACCTCAGCAGTAACTATAGT  699

seq1  CCTTCCAGAAGGAAATACTTATCATTTAATGACATGTATTATAAAGTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGAAGGAAATACTTATCATTTAATGACATGTATTATAAAGTATG  749

seq1  AAATTATAACCTATTTTTCCCACTG-AGAAGTTTTAAAACATAATCCTAT  799
      ||| ||||||||||||||||||||| ||||||||| |||||| |||||||
seq2  AAA-TATAACCTATTTTTCCCACTGAAGAAGTTTT-AAACAT-ATCCTAT  796

seq1  TTGTTCTACATCACATTGTTTTTGAAAAAAGAAAACATGTTTCTGTTAGA  849
      ||||| | ||| ||||||||||||||||||||||||| ||||||| ||||
seq2  TTGTT-TTCAT-ACATTGTTTTTGAAAAAAGAAAACAGGTTTCTGATAGA  844

seq1  CTTTTAAATTGACTATTTACGTACCAATGGCTGGT-TATTT  889
      | ||||||| || |||||||||| ||||||||||| |||||
seq2  C-TTTAAATGGA-TATTTACGTA-CAATGGCTGGTATATTT  882

seq1: chr2_111067154_111068291
seq2: B6Ng01-156K17.g_68_1202 (reverse)

seq1  GTATGTCATATCCTCCGAGTTTTCTTCAGGTGGA--GCTGTGCAGGCATG  48
      ||||||||| |||||||||||||  |||||||||  |||| |||||||||
seq2  GTATGTCAT-TCCTCCGAGTTTTTCTCAGGTGGAAGGCTGGGCAGGCATG  49

seq1  TCTGTAACTCAACAATGGCTGTTTGCCAAACAGAAAGCACA-GTATCAGT  97
      | |  ||||| |||||||||||||||||||||||||||||| ||||||||
seq2  T-TCGAACTC-ACAATGGCTGTTTGCCAAACAGAAAGCACAGGTATCAGT  97

seq1  ACACACAAACTCATCTTCAAGCAGCTCTGCTCTCTAGAGTTGTGGTGTTC  147
      ||||||||||||||||||||||||||||||||||||||||   |||||  
seq2  ACACACAAACTCATCTTCAAGCAGCTCTGCTCTCTAGAGTGTGGGTGT--  145

seq1  TTGGTTTCCCTATTTTTGTGAAGGAGGTCATGAAATTGGATAGGTAAAAA  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCCCTATTTTTGTGAAGGAGGTCATGAAATTGGATAGGTAAAAA  195

seq1  AAAAAAATAAAAGGTGGTTGAGGGGAGTCTGTGAGGAGTTGGTGTTGGAA  247
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAT-AAAGGTGGTTGAGGGGAGTCTGTGAGGAGTTGGTGTTGGAA  244

seq1  AGAATGTGATCAAAATAAAATTTTAAAAGTAAGCAGGAGTGGGTGAGTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGATCAAAATAAAATTTTAAAAGTAAGCAGGAGTGGGTGAGTTG  294

seq1  TGGAGCACGGTGGGGGAGGGTATAGGGTTCTTTGAGGATAGCATTTGAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACGGTGGGGGAGGGTATAGGGTTCTTTGAGGATAGCATTTGAAA  344

seq1  TGTAAATGAAGAAAATATAAAAATAAAGAAAAAAGTATTAAAATAATAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAGAAAATATAAAAATAAAGAAAAAAGTATTAAAATAATAAG  394

seq1  TTGAAAATAGTAATAATTCTTCTTGTATCCCTTTAATAGCCTAATTTTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATAGTAATAATTCTTCTTGTATCCCTTTAATAGCCTAATTTTGA  444

seq1  GATGGGCCTACATATTGATCAGGATCTGGTTCTATCATCCTTGATTCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCCTACATATTGATCAGGATCTGGTTCTATCATCCTTGATTCAGT  494

seq1  CTTAACATAGAGAAATATATCACTTGATATTATTTGTCAACAACAATAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATAGAGAAATATATCACTTGATATTATTTGTCAACAACAATAGG  544

seq1  TTTTGTCACAAATTATTTTGTTTCATTTGAATTTTAATAAAGTTTTATTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCACAAATTATTTTGTTTCATTTGAATTTTAATAAAGTTTTATTA  594

seq1  ATGTAGCAAGGGCAGTTTTGTTCTCTAATTGTGTTACCTCACACAATTTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCAAGGGCAGTTTTGTTCTCTAATTGTGTTACCTCACACAATTTG  644

seq1  GAAACTAATTTTTTGGAAAAAGAAAACATTAAGAAATTTTACCTTGATAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAATTTTTTGGAAAAAGAAAACATTAAGAAATTTTACCTTGATAC  694

seq1  AAAACAGCAATATTCCAATATTCAATGCAGAAGCATTCTATGCTCTGATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAATATTCCAATATTCAATGCAGAAGCATTCTATGCTCTGATG  744

seq1  GCTCTTTTAAAAATCCCTATTTGAAGTCATGTTAAACAAACAACTAAGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTAAAAATCCCTATTTGAAGTCATGTTAAACAAACAACTAAGCT  794

seq1  ATGACAGAATATTTTCATTCAAGAGCACTTGAATTTTTAACATGCACAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAATATTTTCATTCAAGAGCACTTGAATTTTTAACATGCACAGT  844

seq1  TAATCCTACCTCTCTTACTGTTAGCATACACACATATTTCAGAATATTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTACCTCTCTTACTGTTAGCATACACACATATTTCAGAATATTTG  894

seq1  GCAACTATAGTGGGGTGAACATTACCTTGTTCTTTTGTTCCATGTTTGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTATAGTGGGGTGAACATTACCTTGTTCTTTTGTTCCATGTTTGCA  944

seq1  CTGTACTTAAGCAAGCATTTGGCGAGTGTCTGGTTATCTTCTGACACAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTTAAGCAAGCATTTGGCGAGTGTCTGGTTATCTTCTGACACAGC  994

seq1  GTAGTGAAGAGAAGTATTGCCATTTTTGTCCTTTCGGTTTGGATCAGCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAAGAGAAGTATTGCCATTTTTGTCCTTTCGGTTTGGATCAGCAC  1044

seq1  CATGCTTCAATAATATGCACACACATTCATATGTCCAGTTTTGAACAGCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCAATAATATGCACACACATTCATATGTCCAGTTTTGAACAGCC  1094

seq1  TAGGAGCATACCGAAAATCAGATGGCTTGTTCAAAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCATACCGAAAATCAGATGGCTTGTTCAAAGAATTC  1135