BAC Information

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BAC

Clone NameB6Ng01-158L11
Chromosome2 (Build37)
Map Location 45,259,070 - 45,259,838
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158L11.bB6Ng01-158L11.g
ACCDH952592DH952593
length1,197770
definitionDH952592|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L11, 5' end.DH952593|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcttttcaagacttttatcatgaataggtgttggattttg
tcaaatgctttctctgaatctaaggagatgattatgtggtttttgtcttt
gagtttgtttatatactggattatgttgatggatttcagtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgtgcaatggtttgtgaagaacttggattaaatcttctttgaaggtctg
atagaactctgcactaaacccttctggtcccgtgctttttattagctggg
agactattaatgactgattctatttctgtaggggatataggactgtttag
atcattaatctgatcctgatttaaatttgatacgtggtatctgtctagaa
atttgtccatttcatccaggttctccagttttgttgagtatagtcttttg
tagaaggttctgatggtgttttggatttcttcaggatctgtgttatgtct
cccttttcatttctgattttgttaattaggatgctgtccctgtgccctct
agtgagtctggctaagggtttaatctatcttgttgattttctcaaagaac
cagctcctcatttgcttgattctttgaaaaattcttcttgttttcacttg
tttgatttcgcccctgagttttattatttcctgctgtctacttctcttgg
ttaaatttgcttccctttgttctagagcttttaggtgtgttgtcaagctg
ctagtgtgtgctctctctagtttctttttggaggcactaagagctatgag
ttttcctcttagaaatgctttcattgtgtcccataagtttgggtatattg
tggattcattttcattaaactttaaaaagtctttcatttctttctttatt
ccttccttgaccaaggtatcactgagaagagtgtgttcagtttccacatg
aatgttggctttctattatttatttttgttattgaagatcagccctagtc
atggggatctgatagaagacctggggaacaattcataaattttgtatctg
ttgaggccgttttgggaccattaattggtcagtttggagaaggatcatga
agtacgagagaaagaaatccttctggttagacaaaagtcgagggttgttg
aaatccttgttctaacatctgaagttacccgtggctccgtcggtcgt
gaattccatcttgagttttgtgtcttcttgcattactggtggcttctttt
ctggaactcttagttaaatttatggtatatatgtaatttatattttgtta
atctgagaaacataaacatattgctctctaggaagtgtaagcacagttgc
aggggggaaggagagtcaggcaagataagtacatattatgtccattgcat
tttctttcctcatgaggtatatttaacaacttttttttttgcgtgaagga
gaagaaatacatttagatctgcagcagtcagtctggatttgtagactttt
taatagatttggattaccattaaataaatttgatggataactgcagaacc
aactaataataatatactatacatgaactatatacaactttaatttggcc
ctcatttcatattggtagtatattgtagcattctccccaatattttcact
tgcaatgctagagaaaaattctggaaagtatttaccaaaaaaaaaaaaaa
aaaaaaaaagagtgttactcatttaaataatttatttttcaatcaggaac
atcagtgtgatgattaataccctgcattcgttttttctttttaagaaacc
tggaacaaagaggcttgtacagtgtatatatatatataattcatttaggt
gttgaagtctgagtctacatttgtgagaggaaaattcaaaggcgccataa
ttaatatgtcagtctaggaggagcagtggatgcggggggtggaagttaat
gcaactacctgatgttcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45259070_45259838
seq2: B6Ng01-158L11.g_67_836

seq1  GAATTCCATCTTGAGTTTTGTGTCTTCTTGCATTACTGGTGGCTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTTGAGTTTTGTGTCTTCTTGCATTACTGGTGGCTTCTTTT  50

seq1  CTGGAACTCTTAGTTAAATTTATGGTATATATGTAATTTATATTTTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCTTAGTTAAATTTATGGTATATATGTAATTTATATTTTGTTA  100

seq1  ATCTGAGAAACATAAACATATTGCTCTCTAGGAAGTGTAAGCACAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAAACATAAACATATTGCTCTCTAGGAAGTGTAAGCACAGTTGC  150

seq1  AGGGGGGAAGGAGAGTCAGGCAAGATAAGTACATATTATGTCCATTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGAAGGAGAGTCAGGCAAGATAAGTACATATTATGTCCATTGCAT  200

seq1  TTTCTTTCCTCATGAGGTATATTTAACAACTTTTTTTTTTGCGTGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCTCATGAGGTATATTTAACAACTTTTTTTTTTGCGTGAAGGA  250

seq1  GAAGAAATACATTTAGATCTGCAGCAGTCAGTCTGGATTTGTAGACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATACATTTAGATCTGCAGCAGTCAGTCTGGATTTGTAGACTTTT  300

seq1  TAATAGATTTGGATTACCATTAAATAAATTTGATGGATAACTGCAGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGATTTGGATTACCATTAAATAAATTTGATGGATAACTGCAGAACC  350

seq1  AACTAATAATAATATACTATACATGAACTATATACAACTTTAATTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATAATAATATACTATACATGAACTATATACAACTTTAATTTGGCC  400

seq1  CTCATTTCATATTGGTAGTATATTGTAGCATTCTCCCCAATATTTTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCATATTGGTAGTATATTGTAGCATTCTCCCCAATATTTTCACT  450

seq1  TGCAATGCTAGAGAAAAATTCTGGAAAGTATTTACCAAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGCTAGAGAAAAATTCTGGAAAGTATTTACCAAAAAAAAAAAAAA  500

seq1  AAAAAAAAAGAGTGTTACTCATTTAAATAATTTATTTTTCAATCAGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAGTGTTACTCATTTAAATAATTTATTTTTCAATCAGGAAC  550

seq1  ATCAGTGTGATGATTAATACCCTGCATTCGTTTTTTCTTTTTAAGAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTGATGATTAATACCCTGCATTCGTTTTTTCTTTTTAAGAAACC  600

seq1  TGGAACAAAGAGGCTTGTACAGTGTATATATATATATAATTCATTTAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAAGAGGCTTGTACAGTGTATATATATATATAATTCATTTAGGT  650

seq1  GTTGAAGTCTGAGTCTACATTTGTGAGAGGAAAATTCAAAGGCGCCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGTCTGAGTCTACATTTGTGAGAGGAAAATTCAAAGGCGCCATAA  700

seq1  TTAATATGTCAGTCTAGGAGGAGCAGTGGATGC-GGGGGTGGAAGTTAAT  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTAATATGTCAGTCTAGGAGGAGCAGTGGATGCGGGGGGTGGAAGTTAAT  750

seq1  GCAACTACCTGATGTTCAGG  769
      ||||||||||||||||||||
seq2  GCAACTACCTGATGTTCAGG  770