BAC Information

Click to search

BAC

Clone NameB6Ng01-160H01
Chromosome2 (Build37)
Map Location 15,831,442 - 15,832,599
singlet/doubletsinglet
Overlap genenone
Upstream geneCacnb2, LOC100041220, Nsun6, Arl5b, LOC633061, LOC667329, LOC227588
Downstream geneLOC625457, Plxdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160H01.bB6Ng01-160H01.g
ACCDH953813DH953814
length1,1451,144
definitionDH953813|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H01, 5' end.DH953814|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagatgtggatgctcacagtcagcttaatggatggatcatagggctccc
atgagagctagagaagtagcagagctaaggatctgcacctatagtgacac
atatgactaccagtactcggagctcttgactctagctgcaaatatatcaa
agatggctagtccgcatcactgaagaagcccatgacttgccacttatggc
cagttagggacccggcaaaagggaatggtgcaagggaaggtgggt
gaattcaatgaaaatgatgataaaacataccccaaattatgggatacaat
gaaaccagtgctaagaggaaaatccatagcaccagttgttgcagcaaagg
taaacaccctggggcacaatggaatatttaaacagaaaagtgttacttaa
agggtaggttacttaaaggaaggtgcagagaaggatttttagttgggcta
gataccatggaaaaacagaaactaatctgttactagatacttaaaaatct
tatcaaagaaaggcagactagattaaagtaatgggtcagacttcactact
ccctggtcaagatggggagatgttgtgatgtctcaacattcttttggcta
aaaaaaattttttttaattcaatttaattttagattacacctgcaaaata
tttacttgtgtttggggggtctgtttattattaattttaacacatgaatc
atcaagtcatgttagttggtgatgatagcccaggacactcttcatcatga
aagatgctttctgcatgtcaagccagtttaaaagcaccaactaggctccc
taattgttccgcaccaggattgctttttattttcttactttgctgttata
tttatttgctagcagagttgaatcaagcaacatgactttcatgtgtattg
tgaggctaaaaacaaaaacagtcagggcttctgattattttctgaaagca
aactagccacttcacactgaataattggttaaagatccagaagtgtatta
aatgtcttcatattcaagattgtcattaactctcctaaggaagctgtaca
agattttaaacatatagatgctaagactacattactgaagacatagcaca
ttttgggttgcaggacagagaagagtaaagctggtatggactgggagctt
catccctgctgctagccttcacagtggtagaaggtgtgatgcaggctact
gagggagcaagtcattaacagacttccccagctgtgaaccctgtgagcta
ctagatgaacttgtagtcagaaatgcccagtgctgcatgagccaggacta
ccacaggaagtaacaaacacctgtgaaaagattcagtttgccttccagag
gattcatgtctggtactgtagcctggtcaagcccatgggtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15831442_15832599
seq2: B6Ng01-160H01.g_66_1209 (reverse)

seq1  CTCCACACCATGGGCTTTGGACCAGGCTTACAGTACCAGACATGAATTCC  50
      |||||| ||||||||||  |||||||| |||||||||||||||||| |||
seq2  CTCCAC-CCATGGGCTT--GACCAGGC-TACAGTACCAGACATGAA-TCC  45

seq1  TCCTGTGAAGCAAACCTGAAATCTTGTCACAAGGTGTTTGTTTACTCCTG  100
      | ||| ||||  || ||| |||||| |||| |||||||||||   |||||
seq2  T-CTG-GAAGGCAAACTG-AATCTTTTCAC-AGGTGTTTGTTACTTCCTG  91

seq1  TGGTAGTCCTGGCTCATTGCAGCACTGGGCATATCTTGACTGACAGGTTC  150
      |||||||||||||||| ||||||||||||||| || ||||| ||| ||||
seq2  TGGTAGTCCTGGCTCA-TGCAGCACTGGGCATTTC-TGACT-ACAAGTTC  138

seq1  ATCTTGTAGCTCACAGGGTTCACAGCTGGGGAAGTCTGTTAATGACTTTG  200
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCTAGTAGCTCACAGGGTTCACAGCTGGGGAAGTCTGTTAATGAC-TTG  187

seq1  CTCCCTCAGTAGCCTGCATCACACCTTCTACCACTGTGAAGGCTAGCCAG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCCCTCAGTAGCCTGCATCACACCTTCTACCACTGTGAAGGCTAG-CAG  236

seq1  CAGGGATGAAGCTCCCAGTCCATACCAGCTTTACTCTTCTCTGTCCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGAAGCTCCCAGTCCATACCAGCTTTACTCTTCTCTGTCCTGCA  286

seq1  ACCC-AAATGTGCTATGTCTTCAGTAATGTAGTCTTAGCATCTATATGTT  349
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCCAAAATGTGCTATGTCTTCAGTAATGTAGTCTTAGCATCTATATG-T  335

seq1  TTAAAATCTTGTACAGCTTCCTTAGGAGAGTTAATGACAATCTTGAATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCTTGTACAGCTTCCTTAGGAGAGTTAATGACAATCTTGAATAT  385

seq1  GAAGACATTTAATACACTTCTGGATCTTTAACCAATTATTCAGTGTGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACATTTAATACACTTCTGGATCTTTAACCAATTATTCAGTGTGAAG  435

seq1  TGGCTAGTTTGCTTTCAGAAAATAATCAGAAGCCCTGACTGTTTTTGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGTTTGCTTTCAGAAAATAATCAGAAGCCCTGACTGTTTTTGTTT  485

seq1  TTAGCCTCACAATACACATGAAAGTCATGTTGCTTGATTCAACTCTGCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTCACAATACACATGAAAGTCATGTTGCTTGATTCAACTCTGCTA  535

seq1  GCAAATAAATATAACAGCAAAGTAAGAAAATAAAAAGCAATCCTGGTGCG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAAATATAACAGCAAAGTAAGAAAATAAAAAGCAATCCTGGTGCG  585

seq1  GAACAATTAGGGAGCCTAGTTGGTGCTTTTAAACTGGCTTGACATGCAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTAGGGAGCCTAGTTGGTGCTTTTAAACTGGCTTGACATGCAGA  635

seq1  AAGCATCTTTCATGATGAAGAGTGTCCTGGGCTATCATCACCAACTAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTTTCATGATGAAGAGTGTCCTGGGCTATCATCACCAACTAACA  685

seq1  TGACTTGATGATTCATGTGTTAAAATTAATAATAAACAGACCCCCCAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGATGATTCATGTGTTAAAATTAATAATAAACAGACCCCCCAAAC  735

seq1  ACAAGTAAATATTTTGCAGGTGTAATCTAAAATTAAATTGAATTAAAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAATATTTTGCAGGTGTAATCTAAAATTAAATTGAATTAAAAAA  785

seq1  AATTTTTTTTAGCCAAAAGAATGTTGAGACATCACAACATCTCCCCATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTAGCCAAAAGAATGTTGAGACATCACAACATCTCCCCATCT  835

seq1  TGACCAGGGAGTAGTGAAGTCTGACCCATTACTTTAATCTAGTCTGCCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGGAGTAGTGAAGTCTGACCCATTACTTTAATCTAGTCTGCCTT  885

seq1  TCTTTGATAAGATTTTTAAGTATCTAGTAACAGATTAGTTTCTGTTTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATAAGATTTTTAAGTATCTAGTAACAGATTAGTTTCTGTTTTTC  935

seq1  CATGGTATCTAGCCCAACTAAAAATCCTTCTCTGCACCTTCCTTTAAGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATCTAGCCCAACTAAAAATCCTTCTCTGCACCTTCCTTTAAGTA  985

seq1  ACCTACCCTTTAAGTAACACTTTTCTGTTTAAATATTCCATTGTGCCCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCCTTTAAGTAACACTTTTCTGTTTAAATATTCCATTGTGCCCCA  1035

seq1  GGGTGTTTACCTTTGCTGCAACAACTGGTGCTATGGATTTTCCTCTTAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTACCTTTGCTGCAACAACTGGTGCTATGGATTTTCCTCTTAGC  1085

seq1  ACTGGTTTCATTGTATCCCATAATTTGGGGTATGTTTTATCATCATTTTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTTCATTGTATCCCATAATTTGGGGTATGTTTTATCATCATTTTC  1135

seq1  ATTGAATTC  1158
      |||||||||
seq2  ATTGAATTC  1144