BAC Information

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BAC

Clone NameB6Ng01-163M11
Chromosome2 (Build37)
Map Location 86,079,253 - 86,080,399
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048
Downstream geneOlfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163M11.bB6Ng01-163M11.g
ACCDH956278DH956279
length1,144990
definitionDH956278|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M11, 5' end.DH956279|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctctctagagcaaaagagagaataattttggagaaggaaat
cagactgtgaatggtaagtagaaattgccaccagtctatgaaaacatgag
ccttataatcctccttgacttagattctatgattcttttactgcttcttg
aatcctttgattctatgattctttttacagaagagctttaactctcaagt
atattgcagaagttaagtacctgctttcatagttgttattacctacatga
atagtttctttggaggaaaaataaaattctatgaacttaatagctggtga
acattctttacatatcaatgtgggatttggatattgaaagtagaaaagaa
aattaaaagaaggctacaaattccatcattgaccataccagctaaaatta
ttaatatcagatttccaggtgaaaatatgaaatgtgcagtttcatttgat
tttcagataaatgtaaaagtaaaattagcatatgttttacaatttgtata
attaatatataatttaaatgtgagtatataggaaaccactttaaaatgga
atattttaaggtatttcattgcagttacataaagtaaaaattgatttgtt
tatgaatgtcacctggacaaacattcacaagcttttatcctttgatttag
tgtctacaatactgcttaacttctgatttttttctaatactaaacactgc
atatattaagcaaatgaaaatatttagcaattttagaggtaagaacctgt
ggaaaaaactcttaacaccaattaattcctaaatgttatcatcattcata
tggtctaaaaagatctgtgccaactcttcataacttttgtcatctgtaag
ttctaaagttaatattttgtgaggctattttgcttgtgtatcattgattc
tcaataaaataacatatttttttttaaacccagagattttctttgtaaat
aagaagagtaaaaagctaacatacctaacatttttcagtaggatataatc
actgacactgaatatgtagacagatttgagaaatgatctagagtattatt
tgcaacaagtaaaaacgttaaggtaatcaggttactactctgatttctaa
atatttttctcagttcacacatctcatggaggcttacaaaaata
gaattctctccttttggttttgtcgtgagattattaatttcttgtttttt
tctttggtgtaggcaccttccttttgttggagttttccttttaaaatgtt
ctgtagggcatgactggtagatgaatgttgtttaaatttagttctgtcat
aggctattttggtttctccatctatgatgattgagagttttgccagaaat
agtagcctgggttggcatttttattctctttggatctacatgacctctca
gtctcctcttgcttttagggtctctggtggaaagtctggtataattctga
taggtctgcctttgtatgttacttggcccttttttccataccacttgtaa
tatattttctttgttctgtgcatttagtgttttgattattatgtgaatag
tgtattttctattctggtccaatctatctatatgatgttctttaggcttc
ttgtacatttatgggtatctctgcctttaggattgggattcattcttcta
tgattttgttgaagactttttttttaattaggtattttcctcatttacat
ttccaatgctattgcaaaagtcccccatacccttccccccaacccctcta
cccacccactcccacttttttggccctggcattcccctgtactggggcat
ataaagttttgcaagtccaaagggcctctctttccagtgatggctggata
ggccatcttttgatacatatgcagctagagtcaagagctccagggtattg
gttagttcataatgttgttccacctatagggttgcagatccctttagctc
ctttgggtattttctctagctcctccattggggacactgtgatccatcca
atagctgactctgagcatccacttctgtgtttgctaggccccagcatggt
ctcactagagacagctatatctgggtcctttcagcaaaatcttgctagtt
atcaatggtgtgagggttggaggctgatttggaatgatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86079253_86080399
seq2: B6Ng01-163M11.b_37_1180 (reverse)

seq1  TATTTTTGT-AGCAT-CATGAGATGTGTTGAACTGAGAAAAATATTTAAG  48
      ||||||||| ||| | ||||||||||| ||||||||||||||||||||  
seq2  TATTTTTGTAAGCCTCCATGAGATGTG-TGAACTGAGAAAAATATTTAGA  49

seq1  AATCAGAGTAGTAACTTGATTTTACTTTAACGTTTTTAACTTGTTGCAAT  98
      ||||||||||||||| |||  |||| ||||||||||| ||||||||||| 
seq2  AATCAGAGTAGTAACCTGA--TTACCTTAACGTTTTT-ACTTGTTGCAAA  96

seq1  AATTACTCTAGATCATTTCTCAAATCTGTCTACATTTTCAGTGTCAGTGA  148
       | |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAATACTCTAGATCATTTCTCAAATCTGTCTACATATTCAGTGTCAGTGA  146

seq1  TTATATCCTACTGAAAATGTTTAGGTATGTTAGCTTTTTACTCTTCTTAT  198
      |||||||||||||||||   ||||||||||||||||||||||||||||| 
seq2  TTATATCCTACTGAAAAATGTTAGGTATGTTAGCTTTTTACTCTTCTTA-  195

seq1  TTTACAAAGAAAATCTCTGGGTTTAAAAAAAAATATGTTATTTTATTGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGAAAATCTCTGGGTTTAAAAAAAAATATGTTATTTTATTGAG  245

seq1  AATCAATGATACACAAGCAAAATAGCCTCACAAAATATTAACCTTAGAAC  298
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATCAATGATACACAAGCAAAATAGCCTCACAAAATATTAACTTTAGAAC  295

seq1  TTACAGATGACAAAAGTTATGAAGAGTTGGCACAGATCTTTTTAGACCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGACAAAAGTTATGAAGAGTTGGCACAGATCTTTTTAGACCAT  345

seq1  ATGAATGATGATAACATTTAGGAATTAATTGGTGTTAAGAGTTTTTTCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGATGATAACATTTAGGAATTAATTGGTGTTAAGAGTTTTTTCCA  395

seq1  CAGGTTCTTACCTCTAAAATTGCTAAATATTTTCATTTGCTTAATATATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTTACCTCTAAAATTGCTAAATATTTTCATTTGCTTAATATATG  445

seq1  CAGTGTTTAGTATTAGAAAAAAATCAGAAGTTAAGCAGTATTGTAGACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTAGTATTAGAAAAAAATCAGAAGTTAAGCAGTATTGTAGACAC  495

seq1  TAAATCAAAGGATAAAAGCTTGTGAATGTTTGTCCAGGTGACATTCATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAAAGGATAAAAGCTTGTGAATGTTTGTCCAGGTGACATTCATAA  545

seq1  ACAAATCAATTTTTACTTTATGTAACTGCAATGAAATACCTTAAAATATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAATTTTTACTTTATGTAACTGCAATGAAATACCTTAAAATATT  595

seq1  CCATTTTAAAGTGGTTTCCTATATACTCACATTTAAATTATATATTAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAAAGTGGTTTCCTATATACTCACATTTAAATTATATATTAATT  645

seq1  ATACAAATTGTAAAACATATGCTAATTTTACTTTTACATTTATCTGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATTGTAAAACATATGCTAATTTTACTTTTACATTTATCTGAAAA  695

seq1  TCAAATGAAACTGCACATTTCATATTTTCACCTGGAAATCTGATATTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAAACTGCACATTTCATATTTTCACCTGGAAATCTGATATTAAT  745

seq1  AATTTTAGCTGGTATGGTCAATGATGGAATTTGTAGCCTTCTTTTAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGCTGGTATGGTCAATGATGGAATTTGTAGCCTTCTTTTAATTT  795

seq1  TCTTTTCTACTTTCAATATCCAAATCCCACATTGATATGTAAAGAATGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTACTTTCAATATCCAAATCCCACATTGATATGTAAAGAATGTT  845

seq1  CACCAGCTATTAAGTTCATAGAATTTTATTTTTCCTCCAAAGAAACTATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCTATTAAGTTCATAGAATTTTATTTTTCCTCCAAAGAAACTATT  895

seq1  CATGTAGGTAATAACAACTATGAAAGCAGGTACTTAACTTCTGCAATATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGGTAATAACAACTATGAAAGCAGGTACTTAACTTCTGCAATATA  945

seq1  CTTGAGAGTTAAAGCTCTTCTGTAAAAAGAATCATAGAATCAAAGGATTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGTTAAAGCTCTTCTGTAAAAAGAATCATAGAATCAAAGGATTC  995

seq1  AAGAAGCAGTAAAAGAATCATAGAATCTAAGTCAAGGAGGATTATAAGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAGTAAAAGAATCATAGAATCTAAGTCAAGGAGGATTATAAGGC  1045

seq1  TCATGTTTTCATAGACTGGTGGCAATTTCTACTTACCATTCACAGTCTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTCATAGACTGGTGGCAATTTCTACTTACCATTCACAGTCTGA  1095

seq1  TTTCCTTCTCCAAAATTATTCTCTCTTTTGCTCTAGAGAGAAAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTCCAAAATTATTCTCTCTTTTGCTCTAGAGAGAAAGAATTC  1144