BAC Information

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BAC

Clone NameB6Ng01-165H04
Chromosome2 (Build37)
Map Location 96,735,077 - 96,806,683
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c, LOC621146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165H04.bB6Ng01-165H04.g
ACCDH957503DH957504
length1,067249
definitionDH957503|Mus musculus domesticus DNA, BAC clone: B6Ng01-165H04, 5' end.DH957504|Mus musculus domesticus DNA, BAC clone: B6Ng01-165H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,805,603 - 96,806,683)(96,735,077 - 96,735,325)
sequence
gaattctttcacacattccaaggacagtgcccaaaggtaccaccaaaaga
catgtttatggctgtggcattgggcttttagttcttgaacctagacagag
aaagggtaagagctgagctttcaatacatagtctaaatgcttccgtttct
ctttcatgtataattatctatattcactacatttattcactgggcttttt
tcctttcttaaactatattaaattcttctgaggtgacaatattgttttga
caaactggtcctctccatgcccagtccttaggtaaaattgttatctaaca
cccaatgaggctaagtacagagtatgtacattaaagcatagttaaacaga
tcaatctgtgataagaaaggcaaaatgcgaggctttctgtgctgtgatta
aaaaagctaccacttaaggtttacagtggaacacaaaaatgccatttaca
ctttgaaacaaaagaaccattagccttctgtcccatttattgcattattg
atctacaatcctttacactcacttaatttccagccagaagcctgtatgtc
tggtttttctttatccctaaaatggactttgctgaccatacttcctcaca
gcagcctgcgatgcttcttcctctgcaccagcttctcgttttacactgta
aataactactttctgctttccttaattatgttattggcatatatactttc
agacacttttcctcacactacactaacattttgtcaggtcttccttgaat
actgaatccctgggcacagcaaaccatatggcaatacattagtagtaatt
tctgcttcaagtcgaatgacaactatcttcacttcaggtagataggtaga
tgagaatgaataaggcatgcctactgcacttttttatttactaatgtatg
tatattttggcccacaccacatggggcatttataatatataaaatttata
attttttggtaattggtaaatgtatggatacaactaaaatactgagaatt
attagttctcaattcatcttaaatcagtcaaattcactatgatatcggaa
gttacagctcacccaaa
tgtgttgcactagagatgagggtagaatggaaaaggaagctacagcagga
ggtctgctactgagcctagtgagacttaggaactgaatttagagaaaagt
cgagagaggtgaagatctgcagttaggctacctgcttccttggactagaa
aacctatatacctagtgtaaaatttccccaaaatgtggggattaaagtgt
gccactacatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96805603_96806683
seq2: B6Ng01-165H04.b_48_1114 (reverse)

seq1  TTTGGGTTGAGCTGTACTTTCGGATATCATTAGTGATTTTTGACTGGATT  50
      |||||| |||||||||  ||| ||||||| ||||||  ||||||| ||||
seq2  TTTGGG-TGAGCTGTAACTTCCGATATCA-TAGTGA-ATTTGACT-GATT  46

seq1  TAAAGATTGAATTTGGAGAACTAATTAATCTCAGTATTTTAGTTGTATTC  100
      | |||| ||||||  |||||||||| | |||||||||||||||||||| |
seq2  T-AAGA-TGAATT--GAGAACTAATAATTCTCAGTATTTTAGTTGTATCC  92

seq1  AATTACATTTACC-ATTACCAAAAGATTAATAAAATTTTATATA-TATAT  148
      |  |||||||||| |||||||||| ||||   |||||||||||| |||| 
seq2  A--TACATTTACCAATTACCAAAAAATTA--TAAATTTTATATATTATAA  138

seq1  ATG-CCCATGTGGTGTGGGCCAAAAAATAAAAAAATACATAAGTAAATAA  197
      ||| ||||||||||||||||||||| ||    | |||||| |||||||||
seq2  ATGCCCCATGTGGTGTGGGCCAAAATAT----ACATACATTAGTAAATAA  184

seq1  AAAAGTGCAGTAGGCATTGTCTTATTCATTCTCATCTACCTATCTACCTG  247
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  AAAAGTGCAGTAGGCA-TGCCTTATTCATTCTCATCTACCTATCTACCTG  233

seq1  AAGTGAAGATAGTTGTCATTCGACTTGAAGCAGAAATTACTACTAATGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGATAGTTGTCATTCGACTTGAAGCAGAAATTACTACTAATGTA  283

seq1  TTGCCATATGGTTTGCTGTGCCCAGGGATTCAGTATTCAAGGAAGACCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATATGGTTTGCTGTGCCCAGGGATTCAGTATTCAAGGAAGACCTG  333

seq1  ACAAAATGTTAGTGTAGTGTGAGGAAAAGTGTCTGAAAGTATATATGCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGTTAGTGTAGTGTGAGGAAAAGTGTCTGAAAGTATATATGCCA  383

seq1  ATAACATAATTAAGGAAAGCAGAAAGTAGTTATTTACAGTGTAAAACGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAATTAAGGAAAGCAGAAAGTAGTTATTTACAGTGTAAAACGAG  433

seq1  AAGCTGGTGCAGAGGAAGAAGCATCGCAGGCTGCTGTGAGGAAGTATGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTGCAGAGGAAGAAGCATCGCAGGCTGCTGTGAGGAAGTATGGT  483

seq1  CAGCAAAGTCCATTTTAGGGATAAAGAAAAACCAGACATACAGGCTTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGTCCATTTTAGGGATAAAGAAAAACCAGACATACAGGCTTCTG  533

seq1  GCTGGAAATTAAGTGAGTGTAAAGGATTGTAGATCAATAATGCAATAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAATTAAGTGAGTGTAAAGGATTGTAGATCAATAATGCAATAAAT  583

seq1  GGGACAGAAGGCTAATGGTTCTTTTGTTTCAAAGTGTAAATGGCATTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAAGGCTAATGGTTCTTTTGTTTCAAAGTGTAAATGGCATTTTT  633

seq1  GTGTTCCACTGTAAACCTTAAGTGGTAGCTTTTTTAATCACAGCACAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCACTGTAAACCTTAAGTGGTAGCTTTTTTAATCACAGCACAGAA  683

seq1  AGCCTCGCATTTTGCCTTTCTTATCACAGATTGATCTGTTTAACTATGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGCATTTTGCCTTTCTTATCACAGATTGATCTGTTTAACTATGCT  733

seq1  TTAATGTACATACTCTGTACTTAGCCTCATTGGGTGTTAGATAACAATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTACATACTCTGTACTTAGCCTCATTGGGTGTTAGATAACAATTT  783

seq1  TACCTAAGGACTGGGCATGGAGAGGACCAGTTTGTCAAAACAATATTGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAGGACTGGGCATGGAGAGGACCAGTTTGTCAAAACAATATTGTC  833

seq1  ACCTCAGAAGAATTTAATATAGTTTAAGAAAGGAAAAAAGCCCAGTGAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAAGAATTTAATATAGTTTAAGAAAGGAAAAAAGCCCAGTGAAT  883

seq1  AAATGTAGTGAATATAGATAATTATACATGAAAGAGAAACGGAAGCATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGTGAATATAGATAATTATACATGAAAGAGAAACGGAAGCATTT  933

seq1  AGACTATGTATTGAAAGCTCAGCTCTTACCCTTTCTCTGTCTAGGTTCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTATTGAAAGCTCAGCTCTTACCCTTTCTCTGTCTAGGTTCAA  983

seq1  GAACTAAAAGCCCAATGCCACAGCCATAAACATGTCTTTTGGTGGTACCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAAAGCCCAATGCCACAGCCATAAACATGTCTTTTGGTGGTACCT  1033

seq1  TTGGGCACTGTCCTTGGAATGTGTGAAAGAATTC  1081
      ||||||||||||||||||||||||||||||||||
seq2  TTGGGCACTGTCCTTGGAATGTGTGAAAGAATTC  1067

seq1: chr2_96735077_96735325
seq2: B6Ng01-165H04.g_75_323

seq1  TGTGTTGCACTAGAGATGAGGGTAGAATGGAAAAGGAAGCTACAGCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCACTAGAGATGAGGGTAGAATGGAAAAGGAAGCTACAGCAGGA  50

seq1  GGTCTGCTACTGAGCCTAGTGAGACTTAGGAACTGAATTTAGAGAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCTACTGAGCCTAGTGAGACTTAGGAACTGAATTTAGAGAAAAGT  100

seq1  CGAGAGAGGTGAAGATCTGCAGTTAGGCTACCTGCTTCCTTGGACTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGAGGTGAAGATCTGCAGTTAGGCTACCTGCTTCCTTGGACTAGAA  150

seq1  AACCTATATACCTAGTGTAAAATTTCCCCAAAATGTGGGGATTAAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATATACCTAGTGTAAAATTTCCCCAAAATGTGGGGATTAAAGTGT  200

seq1  GCCACTACATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  249
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTACATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  249