BAC Information

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BAC

Clone NameB6Ng01-165H09
Chromosome2 (Build37)
Map Location 114,751,990 - 114,895,831
singlet/doubletdoublet
Overlap geneLOC100043222
Upstream geneGja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4, LOC100043219
Downstream geneLOC100043232, LOC100043236, BC052040, Mrg1, G630016G05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165H09.bB6Ng01-165H09.g
ACCDH957513DH957514
length4691,076
definitionDH957513|Mus musculus domesticus DNA, BAC clone: B6Ng01-165H09, 5' end.DH957514|Mus musculus domesticus DNA, BAC clone: B6Ng01-165H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,895,363 - 114,895,831)(114,751,990 - 114,753,066)
sequence
gaattcattccaagctgcaacggagggaaaggaagacatatccaacaaca
ggtatgccattcttcaaagggttgtgattctggacaggaaatcaagagag
ctaaggctaatgttaaagtgccgaaagagcagggggtgcttgtaaaaggg
atctcacctgaactgcctggaagcctgagctcagcttacagagtcctctg
taacagttggccacccaggctcacgtgggtgaggcagcctgtgtttcact
tcctgttccttcagattcctagaatgctgcttggggcatggcactcttgg
ttccaaacacattttagcagaacatcaacatattttcaattacagaaaat
caaacatgatttctactgcacaccacaaaacagctagacgctgaagcttc
agtgcctctccaaaacgcataggtgcttctctctctctctctctctctct
ctctctctctctctctctc
gaattcttctttaaggaattggagtgcaggctagaatcatcactagtaag
actagccaatggacatgataattatacatgtgatttaaaaacaaatactg
cccccccccaaagagccgggcatggtggaatcccagcacttgggaggcag
aggcaggtgggtttctgagttcgaggccagcctggtctacaaagtgagtt
ccaggacagcccgggcttcacagagaaaccctgtctcaaaacaacaacaa
caacaaaacaaaacaaaacaaaacacccaaaacgaaaacgaaaacaaaaa
caaaaacaaatactgctaccagctcttcctctcttgagcacaggaagaga
attactgagataagttatctttaacaaagcacaaattaaggtggttaagt
tttgaaactagacatattggatgcagatttgacaacagctctgtctattc
cttcccataccaaaatggaatctttagtgaaaaaacaaaagcaaaaaaca
aaaaaccaaaaaccaaaaacaacctattgcgtctccacccagcaataaaa
tgtgtgcataaagtgaaaaatgcattatttaccccatgtgtacatactac
atcatcataccactgagaatgtttctctaatgatagaacatatggagtca
tatataatgaactgtaatgagaacattaaaaatatagatggctttaattt
tatttatttaattaactaaaaacttctataaggatgtttcacaagactcg
aatgggttgcagctaatcccccctgtggagtacagtctgtgtgtgaatac
aaagttcatactggcctaagaaggaagtgatcctctggtagtactatgtc
caattttctgaggaaccgccagactgatttccagagtgttgtacaagcct
gcatcccaccaacaatggaggagtgtacctctttctccacatcacgccag
catctgctgtcgctgaatttttgatcttagccatttctgactggtgtgag
gtggaatcctcaggttgttttgatttgcatttccctgatgaattaaggat
agttgaaacagattttcaggtgcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114895363_114895831
seq2: B6Ng01-165H09.b_41_509 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCACCTA  50

seq1  TGCGTTTTGGAGAGGCACTGAAGCTTCAGCGTCTAGCTGTTTTGTGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTTGGAGAGGCACTGAAGCTTCAGCGTCTAGCTGTTTTGTGGTGT  100

seq1  GCAGTAGAAATCATGTTTGATTTTCTGTAATTGAAAATATGTTGATGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGAAATCATGTTTGATTTTCTGTAATTGAAAATATGTTGATGTTC  150

seq1  TGCTAAAATGTGTTTGGAACCAAGAGTGCCATGCCCCAAGCAGCATTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAATGTGTTTGGAACCAAGAGTGCCATGCCCCAAGCAGCATTCTA  200

seq1  GGAATCTGAAGGAACAGGAAGTGAAACACAGGCTGCCTCACCCACGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTGAAGGAACAGGAAGTGAAACACAGGCTGCCTCACCCACGTGAG  250

seq1  CCTGGGTGGCCAACTGTTACAGAGGACTCTGTAAGCTGAGCTCAGGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGGCCAACTGTTACAGAGGACTCTGTAAGCTGAGCTCAGGCTTC  300

seq1  CAGGCAGTTCAGGTGAGATCCCTTTTACAAGCACCCCCTGCTCTTTCGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGTTCAGGTGAGATCCCTTTTACAAGCACCCCCTGCTCTTTCGGC  350

seq1  ACTTTAACATTAGCCTTAGCTCTCTTGATTTCCTGTCCAGAATCACAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAACATTAGCCTTAGCTCTCTTGATTTCCTGTCCAGAATCACAACC  400

seq1  CTTTGAAGAATGGCATACCTGTTGTTGGATATGTCTTCCTTTCCCTCCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAATGGCATACCTGTTGTTGGATATGTCTTCCTTTCCCTCCGT  450

seq1  TGCAGCTTGGAATGAATTC  469
      |||||||||||||||||||
seq2  TGCAGCTTGGAATGAATTC  469

seq1: chr2_114751990_114753066
seq2: B6Ng01-165H09.g_68_1143

seq1  GAATTCTTCTTTAAGGAATTGGAGTGCAGGCTAGAATCATCACTAGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTAAGGAATTGGAGTGCAGGCTAGAATCATCACTAGTAAG  50

seq1  ACTAGCCAATGGACATGATAATTATACATGTGATTTAAAAACAAATACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCAATGGACATGATAATTATACATGTGATTTAAAAACAAATACTG  100

seq1  CCCCCCCCCAAAGAGCCGGGCATGGTGGAATCCCAGCACTTGGGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCAAAGAGCCGGGCATGGTGGAATCCCAGCACTTGGGAGGCAG  150

seq1  AGGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  200

seq1  CCAGGACAGCCCGGGCTTCACAGAGAAACCCTGTCTCAAAACAACAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCCGGGCTTCACAGAGAAACCCTGTCTCAAAACAACAACAA  250

seq1  CAACAAAACAAAACAAAACAAAACACCCAAAACGAAAACGAAAACAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAACAAAACAAAACAAAACACCCAAAACGAAAACGAAAACAAAAA  300

seq1  CAAAAACAAATACTGCTACCAGCTCTTCCTCTCTTGAGCACAGGAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAATACTGCTACCAGCTCTTCCTCTCTTGAGCACAGGAAGAGA  350

seq1  ATTACTGAGATAAGTTATCTTTAACAAAGCACAAATTAAGGTGGTTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGAGATAAGTTATCTTTAACAAAGCACAAATTAAGGTGGTTAAGT  400

seq1  TTTGAAACTAGACATATTGGATGCAGATTTGACAACAGCTCTGTCTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACTAGACATATTGGATGCAGATTTGACAACAGCTCTGTCTATTC  450

seq1  CTTCCCATACCAAAATGGAATCTTTAGTGAAAAAACAAAAGCAAAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATACCAAAATGGAATCTTTAGTGAAAAAACAAAAGCAAAAAACA  500

seq1  AAAAACCAAAAACCAAAAACAACCTATTGCGTCTCCACCCAGCAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAAAACCAAAAACAACCTATTGCGTCTCCACCCAGCAATAAAA  550

seq1  TGTGTGCATAAAGTGAAAAATGCATTATTTACCCCATGTGTACATACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATAAAGTGAAAAATGCATTATTTACCCCATGTGTACATACTAC  600

seq1  ATCATCATACCACTGAGAATGTTTCTCTAATGATAGAACATATGGAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATACCACTGAGAATGTTTCTCTAATGATAGAACATATGGAGTCA  650

seq1  TATATAATGAACTGTAATGAGAAACATTAAAAATATAGATGGCTTTAATT  700
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATATAATGAACTGTAATGAG-AACATTAAAAATATAGATGGCTTTAATT  699

seq1  TTATTTATTTAATTAACTAAAAACTTCTATAAGGATGTTTCACAAGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTAATTAACTAAAAACTTCTATAAGGATGTTTCACAAGACTC  749

seq1  GAATGGGTTGCAGCTAATCCCCCCTGTGGAGTACAGTCTGTGTGTGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTTGCAGCTAATCCCCCCTGTGGAGTACAGTCTGTGTGTGAATA  799

seq1  CAAAGTTCATACTGGCCTAAGAAGGAAGTGATCCTCTGGTAGTACTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCATACTGGCCTAAGAAGGAAGTGATCCTCTGGTAGTACTATGT  849

seq1  CCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGC  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT-GTTGTACAAGC  898

seq1  CTGCAATCCCACCAACAATGGAGGAGTGTACCTCTTTCTCCACATCCACG  950
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGC-ATCCCACCAACAATGGAGGAGTGTACCTCTTTCTCCACAT-CACG  946

seq1  CCAGCATCTGCTGTCGCCTGAATTTTTGATCTTAGCCA-TTCTGACTGGT  999
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  CCAGCATCTGCTGTCG-CTGAATTTTTGATCTTAGCCATTTCTGACTGGT  995

seq1  GTGAGGTGGAAT-CTCAGGGTTGTTTTGATTTGCATTTCCCTGATG-ATT  1047
      |||||||||||| |||| |||||||||||||||||||||||||||| |||
seq2  GTGAGGTGGAATCCTCA-GGTTGTTTTGATTTGCATTTCCCTGATGAATT  1044

seq1  AAGGAT-GTTG-AACAGTTTTTCAGGTGCTTC  1077
      |||||| |||| ||||| ||||||||||||||
seq2  AAGGATAGTTGAAACAGATTTTCAGGTGCTTC  1076