BAC Information

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BAC

Clone NameB6Ng01-165M16
Chromosome2 (Build37)
Map Location 43,145,041 - 43,145,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165M16.b
ACCDH957757
length940
definitionDH957757|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M16, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataatgctctatattatgttccgtccttgagatgaaattctatt
cccaattgggagataacacatgggatcttaagtggggagggagggacgga
tttgtgctgaaagggaactgggatggggaggagggaaactgaattaggtt
gggcctagacagtttgagatggaaagtgaaattttgattttacagtgagt
gatattaatgtcattttacagtgccttttagaggtatttgatgatacagg
aaattatacaatatcgtttccagggctgggagatcaatactcttgtgaga
aagcttgttaaccctcttggctcattcactgatagagactgcatgtgctc
tactgccaaccaaactaatggccaagtcttacaagttaagaaacagaaaa
ctgtaagaaagtacagagttgtggtatagggaaagattcattattcctcc
tgtatataccaagaaacaaaattgtattctactgtccagctggaaaaaga
taatgaacaaaacatttcagttgctttgtgctatgcctccattcctccct
gactcacaggggaatgcctcacctcattattttaacagaacaatgctgtg
tctttttttttttttttttttgagctgtcttgctatgagaggttgttcct
atgggacatgtggttgtccagttaaagcaactctcatgtatatctgcttt
acttagaaagttagcctattttactttgttcatttaaaatcaaagttttc
aatcaagtttatttagagttatctgaacatacatgatatgacctccaaat
ttggttgccattttaactaactaacaaggttgtagagaaattttaatgca
gcaacatgactgatctgatcactcccaaagattttgttgggtttgtgtgt
tcttcatgaaatgcagaccacctattaactctctgactgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43145041_43145841
seq2: B6Ng01-165M16.b_180_982

seq1  ACTGAATTAGGTAAGGTGCCTAGACAGTTTGAGATGGAAAGTGAAATTTT  50
      ||||||||||||   | |||||||||||||||||||||||||||||||||
seq2  ACTGAATTAGGT--TGGGCCTAGACAGTTTGAGATGGAAAGTGAAATTTT  48

seq1  GATTTTACAGTGAGTGATATTAATGTCATTTTACAGTGCCTTTTAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTACAGTGAGTGATATTAATGTCATTTTACAGTGCCTTTTAGAGGT  98

seq1  ATTTGATGATACAGGAAATTATACAATATCGTTTCCAGGGCTGGGAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATGATACAGGAAATTATACAATATCGTTTCCAGGGCTGGGAGATC  148

seq1  AATACTCTTGTGAGAAAGCTTGTTAACCCTCTTGGCTCATTCACTGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTTGTGAGAAAGCTTGTTAACCCTCTTGGCTCATTCACTGATAG  198

seq1  AGACTGCATGTGCTCTACTGCCAACCAAACTAATGGCCAAGTCTTACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCATGTGCTCTACTGCCAACCAAACTAATGGCCAAGTCTTACAAG  248

seq1  TTAAGAAACAGAAAACTGTAAGAAAGTACAGAGTTGTGGTATAGGGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAACAGAAAACTGTAAGAAAGTACAGAGTTGTGGTATAGGGAAAG  298

seq1  ATTCATTATTCCTCCTGTATATACCAAGAAACAAAATTGTATTCTACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTATTCCTCCTGTATATACCAAGAAACAAAATTGTATTCTACTGT  348

seq1  CCAGCTGGAAAAAGATAATGAACAAAACATTTCAGTTGCTTTGTGCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGAAAAAGATAATGAACAAAACATTTCAGTTGCTTTGTGCTATG  398

seq1  CCTCCATTCCTCCCTGACTCACAGGGGAATGCCTCACCTCATTATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTCCTCCCTGACTCACAGGGGAATGCCTCACCTCATTATTTTAA  448

seq1  CAGAACAATGCTGTGTCTTTTTTTTTTTTTTTTTTTGAGCTGTCTTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAATGCTGTGTCTTTTTTTTTTTTTTTTTTTGAGCTGTCTTGCTA  498

seq1  TGAGAGGTTGTTCCTATGGGACATGTGGTTGTCCAGTT-AAGCAACTCTC  549
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAGAGGTTGTTCCTATGGGACATGTGGTTGTCCAGTTAAAGCAACTCTC  548

seq1  ATGTATATCTGCTTAACTTAGAAAGTTAGCCTATTTTAC-TTGTTCATTT  598
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  ATGTATATCTGCTTTACTTAGAAAGTTAGCCTATTTTACTTTGTTCATTT  598

seq1  AAAATCAAAGTTTTCAATCAAGTTTATTTAGAGTTATCTGAACATACATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAGTTTTCAATCAAGTTTATTTAGAGTTATCTGAACATACATG  648

seq1  ATATGACCTCCAAATTTGGTTGCCATTTTAACTAACTAACAAGGTTGTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCTCCAAATTTGGTTGCCATTTTAACTAACTAACAAGGTTGTAG  698

seq1  AGAAATTTTAATGCAGCAACATGACTGATCTGATCACTCCCAAAGATTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTAATGCAGCAACATGACTGATCTGATCACTCCCAAAGATTTT  748

seq1  GTT-GGTTTGTGTGTTCTCCATGAAATGCAGA-CACCTATAACCTCTCTG  796
      ||| |||||||||||||| ||||||||||||| ||||||| | |||||||
seq2  GTTGGGTTTGTGTGTTCTTCATGAAATGCAGACCACCTATTAACTCTCTG  798

seq1  ACTGG  801
      |||||
seq2  ACTGG  803