BAC Information

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BAC

Clone NameB6Ng01-166D01
Chromosome2 (Build37)
Map Location 142,346,860 - 142,431,787
singlet/doubletdoublet
Overlap geneLOC668913, LOC668914
Upstream genenone
Downstream geneKif16b, Snrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166D01.bB6Ng01-166D01.g
ACCDH958036DH958037
length647490
definitionDH958036|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D01, 5' end.DH958037|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,431,141 - 142,431,787)(142,346,860 - 142,347,355)
sequence
gaattctctttctagaccccagtaagctgacacataatccaggtcactac
atgatacatggaaccatcttcaaaatcagaatcattctgaagtcacttgg
tatgaaaggatattaggagaggaccagggattttctttgcttctcataca
attcaggttgatgtccttgtttatgcaaggctaaaagggggagagaggct
cttaggctctgtcagtggttaactgtaatgtgcaggagaaaccaagaaca
cttttggacatgatgtgttcccacacacatcacattgtgtgttctcttcc
cacttgctgctggccttgccattctctctggttacatttgtgcctacaac
tgtgcttaccagtccctgtgctccctgtgcccccaggtacagatagggag
ggaagactgaagctacaagtgagtctctttgtttttctcccatagaaacc
ctgacacaattatcacctaaatcaattctgccatgacaagttatcctggg
cttgttttggtttgtttcatgcaaccttaatgtcttcctccccataaaag
atatcattttaagttaaagaattaaaaattcagaggaagatcttccacaa
tgtgatagcatcctcaggtgtgtgtgtgtgtgtcgggggttggaggg
catgcctttagttctagatgcataggaaaatagttaatgatgaagtattg
ttgatgcctggtttcttatcattcaagaagacaaggactttgttcactat
ctgttgtggataaccctagggctaattatatttgatgttaattccgttct
cttgtgagtggctgcaaataaggaatgagtcagcactcaggtgatatcct
gtaaacctgcttcccaccttaatttttaaaataaaggagagctgatgatt
gagcaaataaaagggaaggtggagggagagaagtaggagaaaatagaaga
gggagagaatgcagaggaggaggaagaagaaaagcatggcagaagcacat
agcacatagcctggagaatttgatggagaagatggtgcatagcatgtctt
catattaattgcgtcatgttttaattgccatgcatcttagtattgtagat
ttaccccaacaactatcagcacgatttggacacatgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142431141_142431787
seq2: B6Ng01-166D01.b_47_693 (reverse)

seq1  CCCTCCAACCCCCGACACACACACACACACCTGAGGATGCTATCACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAACCCCCGACACACACACACACACCTGAGGATGCTATCACATTG  50

seq1  TGGAAGATCTTCCTCTGAATTTTTAATTCTTTAACTTAAAATGATATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATCTTCCTCTGAATTTTTAATTCTTTAACTTAAAATGATATCTT  100

seq1  TTATGGGGAGGAAGACATTAAGGTTGCATGAAACAAACCAAAACAAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGGAGGAAGACATTAAGGTTGCATGAAACAAACCAAAACAAGCCC  150

seq1  AGGATAACTTGTCATGGCAGAATTGATTTAGGTGATAATTGTGTCAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAACTTGTCATGGCAGAATTGATTTAGGTGATAATTGTGTCAGGGT  200

seq1  TTCTATGGGAGAAAAACAAAGAGACTCACTTGTAGCTTCAGTCTTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGGGAGAAAAACAAAGAGACTCACTTGTAGCTTCAGTCTTCCCTC  250

seq1  CCTATCTGTACCTGGGGGCACAGGGAGCACAGGGACTGGTAAGCACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGTACCTGGGGGCACAGGGAGCACAGGGACTGGTAAGCACAGTT  300

seq1  GTAGGCACAAATGTAACCAGAGAGAATGGCAAGGCCAGCAGCAAGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCACAAATGTAACCAGAGAGAATGGCAAGGCCAGCAGCAAGTGGGA  350

seq1  AGAGAACACACAATGTGATGTGTGTGGGAACACATCATGTCCAAAAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACACACAATGTGATGTGTGTGGGAACACATCATGTCCAAAAGTGT  400

seq1  TCTTGGTTTCTCCTGCACATTACAGTTAACCACTGACAGAGCCTAAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTCTCCTGCACATTACAGTTAACCACTGACAGAGCCTAAGAGC  450

seq1  CTCTCTCCCCCTTTTAGCCTTGCATAAACAAGGACATCAACCTGAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCCCCTTTTAGCCTTGCATAAACAAGGACATCAACCTGAATTGT  500

seq1  ATGAGAAGCAAAGAAAATCCCTGGTCCTCTCCTAATATCCTTTCATACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGCAAAGAAAATCCCTGGTCCTCTCCTAATATCCTTTCATACCA  550

seq1  AGTGACTTCAGAATGATTCTGATTTTGAAGATGGTTCCATGTATCATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTCAGAATGATTCTGATTTTGAAGATGGTTCCATGTATCATGTA  600

seq1  GTGACCTGGATTATGTGTCAGCTTACTGGGGTCTAGAAAGAGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTGGATTATGTGTCAGCTTACTGGGGTCTAGAAAGAGAATTC  647

seq1: chr2_142346860_142347355
seq2: B6Ng01-166D01.g_69_564

seq1  GAATTCCATGCCTTTAGTTCTAGATGCATAGGAAAATAGTTAATGATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCTTTAGTTCTAGATGCATAGGAAAATAGTTAATGATGAA  50

seq1  GTATTGTTGATGCCTGGTTTCTTATCATTCAAGAAGACAAGGACTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTTGATGCCTGGTTTCTTATCATTCAAGAAGACAAGGACTTTGTT  100

seq1  CACTATCTGTTGTGGATAACCCTAGGGCTAATTATATTTGATGTTAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTGTTGTGGATAACCCTAGGGCTAATTATATTTGATGTTAATTC  150

seq1  CGTTCTCTTGTGAGTGGCTGCAAATAAGGAATGAGTCAGCACTCAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTTGTGAGTGGCTGCAAATAAGGAATGAGTCAGCACTCAGGTGA  200

seq1  TATCCTGTAAACCTGCTTCCCACCTTAATTTTTAAAATAAAGGAGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTAAACCTGCTTCCCACCTTAATTTTTAAAATAAAGGAGAGCTG  250

seq1  ATGATTGAGCAAATAAAAGGGAAGGTGGAGGGAGAGAAGTAGGAGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGAGCAAATAAAAGGGAAGGTGGAGGGAGAGAAGTAGGAGAAAAT  300

seq1  AGAAGAGGGAGAGAATGCAGAGGAGGAGGAAGAAGAAAAGCAGGGCAGAA  350
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAAGAGGGAGAGAATGCAGAGGAGGAGGAAGAAGAAAAGCATGGCAGAA  350

seq1  GCACATAGCACATAGCCTGGAGAATTTGATGGAGAAGATGGTGCATAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAGCACATAGCCTGGAGAATTTGATGGAGAAGATGGTGCATAGCA  400

seq1  TGTATTCATATTAATTGAGTCATGTTTTAATTGCCAGGCATATTTGGATT  450
      ||| ||||||||||||| |||||||||||||||||| |||| || | |||
seq2  TGTCTTCATATTAATTGCGTCATGTTTTAATTGCCATGCATCTTAGTATT  450

seq1  GGAGATTTACCCCAACAACTATCAGCACCATTTTGACACAGGATCA  496
      | |||||||||||||||||||||||||| |||| |||||| |||||
seq2  GTAGATTTACCCCAACAACTATCAGCACGATTTGGACACATGATCA  496