BAC Information

Click to search

BAC

Clone NameB6Ng01-166E02
Chromosome2 (Build37)
Map Location 116,537,774 - 116,703,564
singlet/doubletdoublet
Overlap genenone
Upstream geneBC052040, Mrg1, G630016G05Rik, 2810405F15Rik, LOC433464
Downstream geneTmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166E02.bB6Ng01-166E02.g
ACCDH958085DH958086
length1,158930
definitionDH958085|Mus musculus domesticus DNA, BAC clone: B6Ng01-166E02, 5' end.DH958086|Mus musculus domesticus DNA, BAC clone: B6Ng01-166E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,537,774 - 116,538,943)(116,702,628 - 116,703,564)
sequence
gaattcactcaccaagtctcctgagttggtttctgcctcactctggcttc
cttttgctactctttccagggaaccttcattcacccccaaagacaagaca
aagcagttttcctccaacatttgaggaataatagatttgaaactaataga
ttctagttaagcaaatgtcagacttggaccactcattacagaagaagaac
cacattgtgcatattgcttcgcacttgttttttgtctccaagcatagtag
ggtgaattgttgtagggtgaattgccatctaggcccagctctgaagggaa
agtacacggattagttttaactgtcaacttgccacaagctagaataaccc
aggatgagtctagaattatctacaacaggcaggtcttgtggttaggtacc
gggttagggtggggtgttgtcttgattattaattgatgtaggaagaccca
gtcaattgtgggtagcactattccctagaaagtggttcctgggcagtatt
agaggaaaacacagtcagctgaaatacaagtaagcaaggatacatttact
ttctctttgatcttgatgattggtgtaatatgactaactgcttgaattca
tacctcaacatccctgaaatggtgagctgtaacttgagactgtaaaccaa
ataaacctgcccatccctaccctgtgctgatgtccgtcagggtatttgtc
acagcttcaggaatgacactaggacagatagtaagcccagacgtagccaa
agcaggaaacaagaaaacagaatacaagaaaaaagaaaaaagaatgaaaa
gaaaaagcagggaggcagtcttataatttatgttctgaacgacagacttt
ctagctaatatgaggtaaatattcttgtggactacaattttcaaagatgc
tatcatgtttcccttattcctaaagctttctagcgtcttatggcacaaca
gggaaacagtgtgatcagaatactgaggtcaataaagacagcacgcctta
tgctgtctttcccctgacaccttaaatctcttccaattcccttaaggact
taggaatagagaattgagatcattttccgaagtattataaaaatttagta
ttaataggcaaaggattttttctgtgtaaaataaccttaggacagtctct
gtattttt
gaattctccacagctgctaacttctgtatgtgagtcacagaaacctgtca
actttcgggcctctactcaggaccacagagaggtgatttgtgagccagac
cgacttcttaacatactgaagtttctagcaaactattcgtaaaattaacc
gcctctgatgacccccattaccatctcctgaaagaaggcatttcattgct
ttatgaagctgtacacagaagagtaattaacaattcaggccaatggcttc
tcccaggaattgatggtagggagagttcattaaccccagctggttatagc
ttcgccaggaaatgccctggaccaaggttattgcagcccttaatggattg
gatagggactttaactgggattaaaataaagccgagtctccttccagggg
agcctttctccttgaggggctactgaagcaagctgggtgagtggcagagc
ctccagcttggggccctgcagggatgaagacagcagattgctaccagtga
gaatcattaaatcaaggtggaaacagggccttgggggcaggttaaggttt
ttgatacaagcctcttcctgcagaccacagatggcttgattaacacccgg
ttcagcattctgagcagctgttctccgcggtaaagtttctatgcccgccc
tctctgggggaagagtggctgagatccattccttgtctcactccctgctg
tcagaagcctctctgcctttgtgtgcaactctgttgggaaactcttgccc
cattctaggctggagcccctgctggagctgctgggcctgtgcccatttgc
tgtggggactggccaggtagtgcccctgagcccttggtggaaggtgctgg
ggctcctctagatgcgcggcgtggtggagtggtgggaaatggaaagtacc
tctctggtcccgttgtctctcattgaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116537774_116538943
seq2: B6Ng01-166E02.b_44_1201

seq1  GAATTCACTCACCAAGTCTCCTGAGTTGGTTTCTGCCTCACTCTGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACCAAGTCTCCTGAGTTGGTTTCTGCCTCACTCTGGCTTC  50

seq1  CTTTTGCTACTCTTTCCAGGGAACCTTCATTCACCCCCAAAGACAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTACTCTTTCCAGGGAACCTTCATTCACCCCCAAAGACAAGACA  100

seq1  AAGCAGTTTTCCTCCAACATTTGAGGAATAATAGATTTGAAACTAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTTTCCTCCAACATTTGAGGAATAATAGATTTGAAACTAATAGA  150

seq1  TTCTAGTTAAGCAAATGTCAGACTTGGACCACTCATTACAGAAGAAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTAAGCAAATGTCAGACTTGGACCACTCATTACAGAAGAAGAAC  200

seq1  CACATTGTGCATATTGCTTCGCACTTGTTTTTTGTCTCCAAGCATAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGTGCATATTGCTTCGCACTTGTTTTTTGTCTCCAAGCATAGTAG  250

seq1  GGTGAATTGTTGTAGGGTGAATTGCCATCTAGGCCCAGCTCTGAAGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTGTTGTAGGGTGAATTGCCATCTAGGCCCAGCTCTGAAGGGAA  300

seq1  AGTACACGGATTAGTTTTAACTGTCAACTTGCCACAAGCTAGAATAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACGGATTAGTTTTAACTGTCAACTTGCCACAAGCTAGAATAACCC  350

seq1  AGGATGAGTCTAGAATTATCTACAACAGGCAGGTCTTGTGGTTAGGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGTCTAGAATTATCTACAACAGGCAGGTCTTGTGGTTAGGTACC  400

seq1  GGGTTAGGGTGGGGTGTTGTCTTGATTATTAATTGATGTAGGAAGACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGGTGGGGTGTTGTCTTGATTATTAATTGATGTAGGAAGACCCA  450

seq1  GTCAATTGTGGGTAGCACTATTCCCTAGAAAGTGGTTCCTGGGCAGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGTGGGTAGCACTATTCCCTAGAAAGTGGTTCCTGGGCAGTATT  500

seq1  AGAGGAAAACACAGTCAGCTGAAATACAAGTAAGCAAGGATACATTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAACACAGTCAGCTGAAATACAAGTAAGCAAGGATACATTTACT  550

seq1  TTCTCTTTGATCTTGATGATTGGTGTAATATGACTAACTGCTTGAATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGATCTTGATGATTGGTGTAATATGACTAACTGCTTGAATTCA  600

seq1  TACCTCAACATCCCTGAAATGGTGAGCTGTAACTTGAGACTGTAAACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAACATCCCTGAAATGGTGAGCTGTAACTTGAGACTGTAAACCAA  650

seq1  ATAAACCTGCCCATCCCTACCCTGTGCTGATGTCCGTCAGGGTATTTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTGCCCATCCCTACCCTGTGCTGATGTCCGTCAGGGTATTTGTC  700

seq1  ACAGCTTCAGGAATGACACTAGGACAGATAGTAAGCCCAGACGTAGCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCAGGAATGACACTAGGACAGATAGTAAGCCCAGACGTAGCCAA  750

seq1  AGCAGGAAACAAGAAAACAAGAATACAAGAAAAAAGAAAAAAGAATGAAA  800
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  AGCAGGAAACAAGAAAAC-AGAATACAAGAAAAAAGAAAAAAGAATG-AA  798

seq1  AAGAAAAAGCAGGGAGGCAGTCTTATAATTTATGTTCTGAACGACAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGCAGGGAGGCAGTCTTATAATTTATGTTCTGAACGACAGACT  848

seq1  TCCTAGCTAAATATGAGGTAAATATTC-TGTGGACTACAA-TTTCAAAGA  898
      | |||||| |||||||||||||||||| |||||||||||| |||||||||
seq2  TTCTAGCT-AATATGAGGTAAATATTCTTGTGGACTACAATTTTCAAAGA  897

seq1  TGCTATCATGTTTCCCTTATTCCTAAGGC-TTCTAGCGTCTTATGGCACA  947
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  TGCTATCATGTTTCCCTTATTCCTAAAGCTTTCTAGCGTCTTATGGCACA  947

seq1  ACAGGGAAACAGTGTGATCAAGAAAACTGAGGTCAATAAAGACAGCACGC  997
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  ACAGGGAAACAGTGTGATC-AGAATACTGAGGTCAATAAAGACAGCACGC  996

seq1  CTTATGCTTGTCTTTCCCCTGACAACTTTAATTCTTCTTCCAATATCCCT  1047
      ||||||| |||||||||||||||| ||| |||   ||||||||| |||||
seq2  CTTATGC-TGTCTTTCCCCTGACACCTTAAAT--CTCTTCCAAT-TCCCT  1042

seq1  AAAGACATAAGGAAATAAGAGATTTGAGATCATTTTTCTGATAGTTTATT  1097
       |||   | |||||   ||||| ||||||||| ||||| || ||  ||||
seq2  TAAGGACTTAGGAA--TAGAGAATTGAGATCA-TTTTCCGA-AG--TATT  1086

seq1  AATAAAAATTGAG-ATATATATGCAAATGATTTTTTTCTGTGTAAAATTA  1146
       ||||||||| || ||  ||| ||||| || ||||||||||||||||| |
seq2  -ATAAAAATTTAGTATTAATAGGCAAAGGA-TTTTTTCTGTGTAAAATAA  1134

seq1  CCTATGGACATTTTCTGTATTTTT  1170
      |||  ||||| | |||||||||||
seq2  CCTTAGGACAGTCTCTGTATTTTT  1158

seq1: chr2_116702628_116703564
seq2: B6Ng01-166E02.g_68_997 (reverse)

seq1  ACCTTCAATGAGAGGACAAAGGTGAACAGAGAAGATAGCTTTCCATTTCC  50
      ||||||||||||| ||||| || || ||||| || || ||||||||||||
seq2  ACCTTCAATGAGA-GACAACGG-GACCAGAG-AGGTA-CTTTCCATTTCC  46

seq1  CACCCACTCCACCCACGCCGCGCATCTAGAGGAGCCCCAGCACCTTCCAC  100
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CA-CCACTCCA-CCACGCCGCGCATCTAGAGGAGCCCCAGCACCTTCCAC  94

seq1  CAAGGGCTCAGGGGCACCTACCTGGCCAGTCCCCACAGCAAATGGGCACA  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAGGGCTCAGGGGCA-CTACCTGGCCAGTCCCCACAGCAAATGGGCACA  143

seq1  GGCCCAGCAGCTCCAGCAGGGGCTCCAGCCTAGAATGGGGCAAGAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCAGCTCCAGCAGGGGCTCCAGCCTAGAATGGGGCAAGAGTTTC  193

seq1  CCAACAGAGTTGCACACAAAGGCAGAGAGGCTTCTGACAGCAGGGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGAGTTGCACACAAAGGCAGAGAGGCTTCTGACAGCAGGGAGTGA  243

seq1  GACAAGGAATGGATCTCAGCCACTCTTCCCCCAGAGAGGGCGGGCATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGAATGGATCTCAGCCACTCTTCCCCCAGAGAGGGCGGGCATAGA  293

seq1  AACTTTACCGCGGAGAACAGCTGCTCAGAATGCTGAACCGGGTGTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTACCGCGGAGAACAGCTGCTCAGAATGCTGAACCGGGTGTTAATC  343

seq1  AAGCCATCTGTGGTCTGCAGGAAGAGGCTTGTATCAAAAACCTTAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATCTGTGGTCTGCAGGAAGAGGCTTGTATCAAAAACCTTAACCTG  393

seq1  CCCCCAAGGCCCTGTTTCCACCTTGATTTAATGATTCTCACTGGTAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGGCCCTGTTTCCACCTTGATTTAATGATTCTCACTGGTAGCAA  443

seq1  TCTGCTGTCTTCATCCCTGCAGGGCCCCAAGCTGGAGGCTCTGCCACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTCTTCATCCCTGCAGGGCCCCAAGCTGGAGGCTCTGCCACTCA  493

seq1  CCCAGCTTGCTTCAGTAGCCCCTCAAGGAGAAAGGCTCCCCTGGAAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTGCTTCAGTAGCCCCTCAAGGAGAAAGGCTCCCCTGGAAGGAG  543

seq1  ACTCGGCTTTATTTTAATCCCAGTTAAAGTCCCTATCCAATCCATTAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGCTTTATTTTAATCCCAGTTAAAGTCCCTATCCAATCCATTAAGG  593

seq1  GCTGCAATAACCTTGGTCCAGGGCATTTCCTGGCGAAGCTATAACCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAATAACCTTGGTCCAGGGCATTTCCTGGCGAAGCTATAACCAGCT  643

seq1  GGGGTTAATGAACTCTCCCTACCATCAATTCCTGGGAGAAGCCATTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAATGAACTCTCCCTACCATCAATTCCTGGGAGAAGCCATTGGCC  693

seq1  TGAATTGTTAATTACTCTTCTGTGTACAGCTTCATAAAGCAATGAAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTTAATTACTCTTCTGTGTACAGCTTCATAAAGCAATGAAATGC  743

seq1  CTTCTTTCAGGAGATGGTAATGGGGGTCATCAGAGGCGGTTAATTTTACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCAGGAGATGGTAATGGGGGTCATCAGAGGCGGTTAATTTTACG  793

seq1  AATAGTTTGCTAGAAACTTCAGTATGTTAAGAAGTCGGTCTGGCTCACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTGCTAGAAACTTCAGTATGTTAAGAAGTCGGTCTGGCTCACAA  843

seq1  ATCACCTCTCTGTGGTCCTGAGTAGAGGCCCGAAAGTTGACAGGTTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCTCTGTGGTCCTGAGTAGAGGCCCGAAAGTTGACAGGTTTCTG  893

seq1  TGACTCACATACAGAAGTTAGCAGCTGTGGAGAATTC  937
      |||||||||||||||||||||||||||||||||||||
seq2  TGACTCACATACAGAAGTTAGCAGCTGTGGAGAATTC  930