BAC Information

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BAC

Clone NameB6Ng01-167D15
Chromosome2 (Build37)
Map Location 85,375,914 - 85,377,019
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik
Downstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167D15.bB6Ng01-167D15.g
ACCDH958781DH958782
length1,1011,155
definitionDH958781|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D15, 5' end.DH958782|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggaagacactgggtgaaaatgagaacgagatagtgtgatgcc
tgtctttcagtgatcagaggtcaccatgtcttttctctgtgggcccttcc
acccgaagtgctcccctccatcttatcagtcttcctaggaaactccttgc
tcagtattccaaactcagtttaagcaatgcttgcattttataatgaacat
tattttgaattgtcttgaattttgccattcatctttaaaaattaaaaaat
attgttttattcattcattaaaaaacttaaattgtacattccaatgaggc
attatgtagtgttttttaatttttacaaagcatttttatttttattattt
tgcttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgaagtatgtatgc
ccgtgaagccagaagggatgagatctgaaggtagagtttcaaggcagtta
tgaaccttcccctgtgggtgctgggaactgaactcaggtcctctggaaga
gctggagccatcttcacagccacctggtattgatatttgtatacattatg
taatgtttaagtcagtttaaacatatctgtgtcctcaaacgtccatcatt
ctttatagtaagaacattcaaaactcttctaatgtgaaagcatacactat
atttttgttacctcaaactactctactgtgcaattgtaggctagaatgta
ctcttatgtgtaacttatacccagtgatcagcctgatgcatcctcccttc
ttaccttctttgtccagcctccagtaacctccatctacttccaacttcca
tgaattcagcttttagattgcaggtctgggtgaagtcaatgagatacagg
ggaggtcaatgagatacaggggaggtcaatgagatacagggggaggtcat
tcttgatccttcctggtaagactagagcattctctgttcttattgctcct
gagcatggtgaattatgcacccccttcatttcatctttgttgcatattag
aataagatatgaattggagaaggcaagggccatgccccttctttgctcct
cctttctcaactgattgttagtacttctaggacttgtttacagacgatgg
a
gaattctcacctgaggaatactgaatagctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggaaaggatgtggagaaagagaaacactcctccattgttggtg
gggttgcaagcttgtacaatcactctggaaatcagtctggcagttcctca
gaaaattggacatggtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtttcaactagtaagaaagaaacatgctccactat
gttcatagcagccttatttacaatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaaaaaaatgtggtacatttac
acaatggagtactactcagctattaaaaagaatgaatttatgaaattcct
aggcaaatggttggacctggagggcattatcatgagtgaggtaacccaat
cacaaaataactcaaatgatatgtactcactgataagtgattattagccc
agaaactagaatacccaatacataagttacaatttgcaaaacacatgaaa
ctcaagaagaacgaagaccaaagtgtggacactttgccccttctttaaat
tgggaacaaaacacccatggcaggagttacagagaccaagtttggagctg
agactaaaggatgaaccatcgagagactgccatatccaaggatccatcct
ataatcagcctccaaacgctgacaccattgcatacactagcaagattttg
ctgaaaggaccctgatatagctgtctcttgtgagactaggctggggccta
gcaaacacataagtggatgctcacagtcagctattggatggatcacaggg
ccccaatggaggagctagagaagtacccaggagctaagagatctgcaccc
tgtagtgacacattctgactagcagtatcccggagctcttgactctagct
gcatatgtatcaaagatgctagtcgcatcactgaggaaggtcaatgacat
gcactttaatgccagtacaggacgccaggcaactgaagtgggtgtggtag
ggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85375914_85377019
seq2: B6Ng01-167D15.b_47_1147

seq1  GAATTCTTGGAAGACACTGGGTGAAAATGAGAACGAGATAGTGTGATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAAGACACTGGGTGAAAATGAGAACGAGATAGTGTGATGCC  50

seq1  TGTCTTTCAGTGATCAGAGGTCACCATGTCTTTTCTCTGTGGGCCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCAGTGATCAGAGGTCACCATGTCTTTTCTCTGTGGGCCCTTCC  100

seq1  ACCCGAAGTGCTCCCCTCCATCTTATCAGTCTTCCTAGGAAACTCCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAAGTGCTCCCCTCCATCTTATCAGTCTTCCTAGGAAACTCCTTGC  150

seq1  TCAGTATTCCAAACTCAGTTTAAGCAATGCTTGCATTTTATAATGAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTCCAAACTCAGTTTAAGCAATGCTTGCATTTTATAATGAACAT  200

seq1  TATTTTGAATTGTCTTGAATTTTGCCATTCATCTTTAAAAATTAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAATTGTCTTGAATTTTGCCATTCATCTTTAAAAATTAAAAAAT  250

seq1  ATTGTTTTATTCATTCATTAAAAAACTTAAATTGTACATTCCAATGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTATTCATTCATTAAAAAACTTAAATTGTACATTCCAATGAGGC  300

seq1  ATTATGTAGTGTTTTTTAATTTTTACAAAGCATTTTTATTTTTATTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTAGTGTTTTTTAATTTTTACAAAGCATTTTTATTTTTATTATTT  350

seq1  TGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGAAGTATGTATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGAAGTATGTATGC  400

seq1  CCGTGAAGCCAGAAGGGATGAGATCTGAAGGTAGAGTTTCAAGGCAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAAGCCAGAAGGGATGAGATCTGAAGGTAGAGTTTCAAGGCAGTTA  450

seq1  TGAACCTTCCCCTGTGGGTGCTGGGAACTGAACTCAGGTCCTCTGGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTCCCCTGTGGGTGCTGGGAACTGAACTCAGGTCCTCTGGAAGA  500

seq1  GCTGGAGCCATCTTCACAGCCACCTGGTATTGATATTTGTATACATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCCATCTTCACAGCCACCTGGTATTGATATTTGTATACATTATG  550

seq1  TAATGTTTAAGTCAGTTTAAACATATCTGTGTCCTCAAACGTCCATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTAAGTCAGTTTAAACATATCTGTGTCCTCAAACGTCCATCATT  600

seq1  CTTTATAGTAAGAACATTCAAAACTCTTCTAATGTGAAAGCATACACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGTAAGAACATTCAAAACTCTTCTAATGTGAAAGCATACACTAT  650

seq1  ATTTTTGTTACCTCAAACTACTCTACTGTGCAATTGTAGGCTAGAATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTACCTCAAACTACTCTACTGTGCAATTGTAGGCTAGAATGTA  700

seq1  CTCTTATGTGTAACTTATACCCAGTGATCAGCCTGATGCATCCTCCCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGTGTAACTTATACCCAGTGATCAGCCTGATGCATCCTCCCTTC  750

seq1  TTACCTTCTTTGTCCAGCCTCCAGTAACCTCCATCTACTTCCAACTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTCTTTGTCCAGCCTCCAGTAACCTCCATCTACTTCCAACTTCCA  800

seq1  TGAATTCAGCTTTTAGATTGCAGGTCTGGGTGAAGTCAATGAGATACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAGCTTTTAGATTGCAGGTCTGGGTGAAGTCAATGAGATACAGG  850

seq1  GGAGGTCAATGAGATACAGGGGAGGTCAATGAGATACA-GGGGAGGTCAT  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGAGGTCAATGAGATACAGGGGAGGTCAATGAGATACAGGGGGAGGTCAT  900

seq1  TCTTGATCCTTCCTGGTAAGACTAGAGCAGTCTCTGTTCTTATTGCTCCT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTTGATCCTTCCTGGTAAGACTAGAGCATTCTCTGTTCTTATTGCTCCT  950

seq1  GAGCATGGTGATATTATGCACCCCCTTCATTTGCATCTTTGTTGCATATT  999
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  GAGCATGGTGA-ATTATGCACCCCCTTCATTT-CATCTTTGTTGCATATT  998

seq1  AGAATTAGAATATGAATTGTGAGAGGGCAAGGGCCATGCCC--TCTTTGC  1047
      ||||| || |||||||||| |||| ||||||||||||||||  |||||||
seq2  AGAATAAG-ATATGAATTG-GAGAAGGCAAGGGCCATGCCCCTTCTTTGC  1046

seq1  TTCTGCATTTCTCAAACTGATGTTAAGTAACTCTCAGGACTTGATTACAG  1097
      | || | |||||| |||||||  | ||||  ||| |||||||| ||||||
seq2  TCCT-CCTTTCTC-AACTGATTGTTAGTACTTCT-AGGACTTGTTTACAG  1093

seq1  AAGGATGGA  1106
       | ||||||
seq2  -ACGATGGA  1101