BAC Information

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BAC

Clone NameB6Ng01-167K21
Chromosome2 (Build37)
Map Location 115,420,228 - 115,567,751
singlet/doubletdoublet
Overlap geneBC052040
Upstream geneAtpbd4, LOC100043219, LOC100043222, LOC100043232, LOC100043236
Downstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167K21.bB6Ng01-167K21.g
ACCDH959109DH959110
length1,1921,076
definitionDH959109|Mus musculus domesticus DNA, BAC clone: B6Ng01-167K21, 5' end.DH959110|Mus musculus domesticus DNA, BAC clone: B6Ng01-167K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,566,519 - 115,567,751)(115,420,228 - 115,421,305)
sequence
gaattcctcaagtgcaaatagtttcttttaaaagttattctcatcatatc
tttagtgcgatgcagaaaaggaatcttaaatatttatttcagcattttgt
atttttattggttttgtaaaccactgaaattgtagggtgtacttagagcg
agctgattccatatgcagtaaatcaactggggaagagactagtgagttca
catttacaaagtgaaccacgacagctaaaaatacaacctcttccactccc
accctgaaaaacctgccaacatccaaacaacaatgaaattgcatgctaga
gagatgtatacgatcttccaagataaatacatacaaattaaactggagaa
cctcaaggtgttattgattaattctaagaaacacttcacaatcaactctc
atatctggcttccctggaataactaggagaggaaggaaccaattgcagag
aatatgaatgaagaagggcagtgcattaaaataatttaaaggcaacacag
gaagagaagttgttggcagagcacaatcacaagcaaccatggagaaaagg
aatttcaactctatgcacgaccaggatagccaagccccctagcctgtccc
cactgttttcactggcctcacaggttaggtccttccctttttccctctgg
gacgtcccatctctggagatctatctgttcagagctttctaacagcagtg
aggaacaacagaggaaagccttcctgggataaagccaacaactctagaaa
tttatacagaaggatggtagagggcttacaatccatccaagccaggcttg
gtaacttggtatttggtattcagagtcatattcctgggtgcgcagaacac
tgctttctctccacaaggtatgaacatgttctacaaccaattatgtaaag
aatttaaaagattttgtttattcttatgcgtatgggtgttttgcctgcat
gtatgtatgtgaccacatgcatacctggggctgcagatatcagagaggag
tagacaccctgagctgaacacatgactgtgagccaccatgtgatgctggg
atgacccagtctcagacacatgatgctttaccacttgaacatttctcatg
cccgacaagcttttcggaatttcatcaatgctaactcctagtatagtata
caggatcactacacttataacttgacctggacaaacactggc
gaattccttgccaggtaacctatgatgggtctctacctcccttgatgaaa
gacctttatttatgaaatgaaatcattaccaattcaaatgagaatatgta
acatacataacacaagccttgataccctagctaccacagagctcgttatt
gttactgttatctattcaagggtgtttcttgcagtgctttttagagttgt
agtcattagacttagaaaatagaagcgaaaagaatttgcctaacagcagc
cttagttcattcttccttctcctcctcctccttgtaaattgcgacgaaat
cttgatgtcatattctgttgcttttcttcccccaaacagcaatgttgtat
gaacagtacttaaggcatcaagaaaataattacatgagataagcctcagc
ttttaacattatgatcatttccctttagttttgagattctcaatcttcca
aatgctgtgaccctttaatacagttcctcttgctgtgctgaccccaacca
taaaattattttgctgctactttataaccgtaattttgctactgttataa
attataatgtaaatatctgatgtgcagaatatctgatatgcaaacctcca
agcggtcgaaacctgcagtctgagaacctaaggagcacttctcaaattga
taggaaggtgatttgtgtgttaacggtgtgtctgattgaattcagtttgg
attctgggttttgcttatcaggaggcagctgtaacccaaaaactgtgttt
aggtgtacgtcttcaggacatagtgggctcagtcatcacacagatgtgga
ctttggttctagtgtttaatacacgcattaatcagctttgaagaatgtgt
ttctaaatagcttaaagccatttgtcctactagtaccacttatgtgaaga
ctaatggaaaatacagtgttgcagaaagtttatagaagattacagttact
actccttaagtctttactttactaatagatccttttctaggatgctgcct
ttgaggaagcctgtactttctgtacttcccagttgagtggtatgaacttg
gggcaagaactcacccctcttctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115566519_115567751
seq2: B6Ng01-167K21.b_48_1239 (reverse)

seq1  GCCAGTGTTTGTCCAGCTCAATGTTTATTAAGGTGGTAGGTAGATTTCTC  50
      |||||||||||||||| ||||   |||| |  || ||     |||    |
seq2  GCCAGTGTTTGTCCAGGTCAA--GTTATAAGTGTAGT-----GAT---CC  40

seq1  TGATAATAACTATACTAGGGAGTTAGCATTGGAATTAGAATTCTCAGAAA  100
      || ||   ||||||||| |||||||||||||  ||  ||| | || ||||
seq2  TG-TA--TACTATACTA-GGAGTTAGCATTG--AT--GAAAT-TCCGAAA  81

seq1  AGCTTGTCGGGGCATGGAGAAATTGTTC-AGTGGTTAAAAGCACTCATTG  149
      |||||||| |||||| |||||| ||||| ||||||  |||||| ||||  
seq2  AGCTTGTC-GGGCAT-GAGAAA-TGTTCAAGTGGT--AAAGCA-TCAT--  123

seq1  GTTGTCCTTGAGGACCTGGGTTCAATTCCCAGCATCCACATGGTGGCTCA  199
        ||||  ||||   ||||| |||  ||||||||| ||||||||||||||
seq2  -GTGTC--TGAG--ACTGGG-TCA--TCCCAGCAT-CACATGGTGGCTCA  164

seq1  CAGTCATGTGTTCAGCTCCAGGGTGTTCTACTCCCTCTTCTGATATCTGC  249
      ||||||||||||||||| ||||||| |||||| |||| ||||||||||||
seq2  CAGTCATGTGTTCAGCT-CAGGGTG-TCTACT-CCTC-TCTGATATCTGC  210

seq1  AGGCCCCAGGTATGCATGTGGTCCACATACATACATGCAGGCAAAACACC  299
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  A-GCCCCAGGTATGCATGTGGT-CACATACATACATGCAGGCAAAACACC  258

seq1  CATACGCATAAGAATAAACAAAATCTTTTAAATTCTTTACATAATTGGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGCATAAGAATAAACAAAATCTTTTAAATTCTTTACATAATTGGTT  308

seq1  GTAGAACATGTTCATACCTTGTGGAGAGAAAGCAGTGTTCTGCGCACCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACATGTTCATACCTTGTGGAGAGAAAGCAGTGTTCTGCGCACCCA  358

seq1  GGAATATGACTCTGAATACCAAATACCAAGTTACCAAGCCTGGCTTGGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGACTCTGAATACCAAATACCAAGTTACCAAGCCTGGCTTGGAT  408

seq1  GGATTGTAAGCCCTCTACCATCCTTCTGTATAAATTTCTAGAGTTGTTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTAAGCCCTCTACCATCCTTCTGTATAAATTTCTAGAGTTGTTGG  458

seq1  CTTTATCCCAGGAAGGCTTTCCTCTGTTGTTCCTCACTGCTGTTAGAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCCAGGAAGGCTTTCCTCTGTTGTTCCTCACTGCTGTTAGAAAG  508

seq1  CTCTGAACAGATAGATCTCCAGAGATGGGACGTCCCAGAGGGAAAAAGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACAGATAGATCTCCAGAGATGGGACGTCCCAGAGGGAAAAAGGG  558

seq1  AAGGACCTAACCTGTGAGGCCAGTGAAAACAGTGGGGACAGGCTAGGGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCTAACCTGTGAGGCCAGTGAAAACAGTGGGGACAGGCTAGGGGG  608

seq1  CTTGGCTATCCTGGTCGTGCATAGAGTTGAAATTCCTTTTCTCCATGGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTATCCTGGTCGTGCATAGAGTTGAAATTCCTTTTCTCCATGGTT  658

seq1  GCTTGTGATTGTGCTCTGCCAACAACTTCTCTTCCTGTGTTGCCTTTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGATTGTGCTCTGCCAACAACTTCTCTTCCTGTGTTGCCTTTAAA  708

seq1  TTATTTTAATGCACTGCCCTTCTTCATTCATATTCTCTGCAATTGGTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAATGCACTGCCCTTCTTCATTCATATTCTCTGCAATTGGTTCC  758

seq1  TTCCTCTCCTAGTTATTCCAGGGAAGCCAGATATGAGAGTTGATTGTGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCTAGTTATTCCAGGGAAGCCAGATATGAGAGTTGATTGTGAA  808

seq1  GTGTTTCTTAGAATTAATCAATAACACCTTGAGGTTCTCCAGTTTAATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTTAGAATTAATCAATAACACCTTGAGGTTCTCCAGTTTAATTT  858

seq1  GTATGTATTTATCTTGGAAGATCGTATACATCTCTCTAGCATGCAATTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATTTATCTTGGAAGATCGTATACATCTCTCTAGCATGCAATTTC  908

seq1  ATTGTTGTTTGGATGTTGGCAGGTTTTTCAGGGTGGGAGTGGAAGAGGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTTTGGATGTTGGCAGGTTTTTCAGGGTGGGAGTGGAAGAGGTT  958

seq1  GTATTTTTAGCTGTCGTGGTTCACTTTGTAAATGTGAACTCACTAGTCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTAGCTGTCGTGGTTCACTTTGTAAATGTGAACTCACTAGTCTC  1008

seq1  TTCCCCAGTTGATTTACTGCATATGGAATCAGCTCGCTCTAAGTACACCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGTTGATTTACTGCATATGGAATCAGCTCGCTCTAAGTACACCC  1058

seq1  TACAATTTCAGTGGTTTACAAAACCAATAAAAATACAAAATGCTGAAATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTCAGTGGTTTACAAAACCAATAAAAATACAAAATGCTGAAATA  1108

seq1  AATATTTAAGATTCCTTTTCTGCATCGCACTAAAGATATGATGAGAATAA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAGATTCCTTTTCTGCATCGCACTAAAGATATGATGAGAATAA  1158

seq1  CTTTTAAAAGAAACTATTTGCACTTGAGGAATTC  1233
      ||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAAGAAACTATTTGCACTTGAGGAATTC  1192

seq1: chr2_115420228_115421305
seq2: B6Ng01-167K21.g_65_1140

seq1  GAATTCCTTGCCAGGTAACCTATGATGGGTCTCTACCTCCCTTGATGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCCAGGTAACCTATGATGGGTCTCTACCTCCCTTGATGAAA  50

seq1  GACCTTTATTTATGAAATGAAATCATTACCAATTCAAATGAGAATATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATTTATGAAATGAAATCATTACCAATTCAAATGAGAATATGTA  100

seq1  ACATACATAACACAAGCCTTGATACCCTAGCTACCACAGAGCTCGTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATAACACAAGCCTTGATACCCTAGCTACCACAGAGCTCGTTATT  150

seq1  GTTACTGTTATCTATTCAAGGGTGTTTCTTGCAGTGCTTTTTAGAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGTTATCTATTCAAGGGTGTTTCTTGCAGTGCTTTTTAGAGTTGT  200

seq1  AGTCATTAGACTTAGAAAATAGAAGCGAAAAGAATTTGCCTAACAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTAGACTTAGAAAATAGAAGCGAAAAGAATTTGCCTAACAGCAGC  250

seq1  CTTAGTTCATTCTTCCTTCTCCTCCTCCTCCTTGTAAATTGCGACGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTCATTCTTCCTTCTCCTCCTCCTCCTTGTAAATTGCGACGAAAT  300

seq1  CTTGATGTCATATTCTGTTGCTTTTCTTCCCCCAAACAGCAATGTTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTCATATTCTGTTGCTTTTCTTCCCCCAAACAGCAATGTTGTAT  350

seq1  GAACAGTACTTAAGGCATCAAGAAAATAATTACATGAGATAAGCCTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTACTTAAGGCATCAAGAAAATAATTACATGAGATAAGCCTCAGC  400

seq1  TTTTAACATTATGATCATTTCCCTTTAGTTTTGAGATTCTCAATCTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACATTATGATCATTTCCCTTTAGTTTTGAGATTCTCAATCTTCCA  450

seq1  AATGCTGTGACCCTTTAATACAGTTCCTCTTGCTGTGCTGACCCCAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTGACCCTTTAATACAGTTCCTCTTGCTGTGCTGACCCCAACCA  500

seq1  TAAAATTATTTTGCTGCTACTTTATAACCGTAATTTTGCTACTGTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTTTGCTGCTACTTTATAACCGTAATTTTGCTACTGTTATAA  550

seq1  ATTATAATGTAAATATCTGATGTGCAGAATATCTGATATGCAAACCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATGTAAATATCTGATGTGCAGAATATCTGATATGCAAACCTCCA  600

seq1  AGCGGTCGAAACCTGCAGTCTGAGAACCTAAGGAGCACTTCTCAAATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTCGAAACCTGCAGTCTGAGAACCTAAGGAGCACTTCTCAAATTGA  650

seq1  TAGGAAGGTGATTTGTGTGTTAACGGTGTGTCTGATTGAATTCAGTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGTGATTTGTGTGTTAACGGTGTGTCTGATTGAATTCAGTTTGG  700

seq1  ATTCTGGGTTTTGCTTATCAGGAGGCAGCTGTAACCCAAAAACTGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGTTTTGCTTATCAGGAGGCAGCTGTAACCCAAAAACTGTGTTT  750

seq1  AGGTGTACGTCTTCAGGACATAGTGGGCTCAGTCATCACACAGATGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACGTCTTCAGGACATAGTGGGCTCAGTCATCACACAGATGTGGA  800

seq1  CTTTGGTTCTAGTGTTTAATACACGCATTAATCAGCTTTGAAGAATGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTCTAGTGTTTAATACACGCATTAATCAGCTTTGAAGAATGTGT  850

seq1  TTCTAAATAGGCTTAAAGCCATTTGTCCTACTAGTACCACTTATGTGAAG  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATA-GCTTAAAGCCATTTGTCCTACTAGTACCACTTATGTGAAG  899

seq1  ACTAATGGAAAATACAGTGTTGCAGAAAGTTTATAG-AGATTACAGTTAC  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTAATGGAAAATACAGTGTTGCAGAAAGTTTATAGAAGATTACAGTTAC  949

seq1  TACTCCTTAAGTCTTTACTTTTACTAATAGATCCTTTTCTAGAATGCTGC  999
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  TACTCCTTAAGTCTTTAC-TTTACTAATAGATCCTTTTCTAGGATGCTGC  998

seq1  CTTTTGAGATAGCCTGTACTTTCTGTACTTCCCAGTTGAGTGGTAATGAC  1049
      | ||||||  |||||||||||||||||||||||||||||||||||   ||
seq2  C-TTTGAGGAAGCCTGTACTTTCTGTACTTCCCAGTTGAGTGGTATGAAC  1047

seq1  TT-GGGCAAGACCTCACCCCTCTTTCTTTT  1078
      || |||||||| |||||||||| |||||||
seq2  TTGGGGCAAGAACTCACCCCTC-TTCTTTT  1076