BAC Information

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BAC

Clone NameB6Ng01-167P21
Chromosome2 (Build37)
Map Location 158,499,196 - 158,597,414
singlet/doubletdoublet
Overlap genePpp1r16b
Upstream geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5
Downstream gene2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167P21.bB6Ng01-167P21.g
ACCDH959349DH959350
length1,150111
definitionDH959349|Mus musculus domesticus DNA, BAC clone: B6Ng01-167P21, 5' end.DH959350|Mus musculus domesticus DNA, BAC clone: B6Ng01-167P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(158,596,245 - 158,597,414)(158,499,196 - 158,499,306)
sequence
gaattccatgtcccaacctttggggaactgtttaaagccttcagcccctg
ggaagcagggaggctgtcctctgtctggcaaggaggcacattccagccct
cgagaagctgagggaggaggatagtgggttcaatgaaaaaaaacaaccaa
gcaagcacagtactggccctggagctaggcacacactgcacccagctctg
cctcaccgtgctcaacaagctacctgacctaaatgcgtctgctatgtcct
ttaagtgcagcttcctctggccttgggaggactaggaggtaatctgggta
aagaactcaattagagccccaaatatttgcctccaccacacagatcagac
atctggaaacacctgacatatgaaccgtcacagccttccctgtcacgagc
aatgcacttcaaaggacatggccagggtgacacagccactcccagacacc
catgcacgtcctcacaggtggcagcctttgacagccagcaaattagtcct
ctgatccctctcagtagctagtcctcctccacccggggacaggaacttct
cccacagggctcacgcacaacactgtagttaatggggagtctcagagtct
gccttgggtaaagtcctgtctccaccatctctagaagcaacctagcttct
ccgtgctgcagtttatcctctctaaagtggacagaataatcaacaatttc
aaggttactaaaaatactgtctggcaaagagaaagcattgtttgtttgtt
tgtttgtttgtttgttttgagacacaccccaccccacaccccatatagct
tttgtaggcctggaacttgcaatttagaccaagctagcctcaaactcata
gagatgtgcctgtgtctgcctgctgggattaaaggcggtgagaaaacaat
ttttattgactcatttttttttcctcttaaagcctcatgcctcaaattaa
cctaattcctatacaccccactccttggcagctcagtcttgttttcttat
gtattccagtgtagtcctgtcactgcaactaggcagcaagtctcagcttc
agcagcttgcgcacacgccttgaaagccagcatcgagccagagcccgctg
ttctctacggactgaggcggcagagccatcacctcacgtttccttctccc

aggtaggcagagggttaacgggtatgtgcctcaaactggttgggttaggg
ctagagtatagagtctggtttggcagggctcacacttcagcaggctcctg
ggagggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_158596245_158597414
seq2: B6Ng01-167P21.b_45_1194 (reverse)

seq1  GGGAGAAGGAAACACGTGGAAGGTTGATGGCTCTGCCGCCTCAGTTCCCG  50
      |||||||||||  |||||  ||| |||||||||||||||||||||  |||
seq2  GGGAGAAGGAA--ACGTG--AGG-TGATGGCTCTGCCGCCTCAGT--CCG  43

seq1  TAGAGAACAGCCGGGCTCTGCCTTCGAATGCTGGGCTTCCAGGCGTGTGC  100
      |||||||||| ||||||||| | ||| |||||||  ||| ||||||||||
seq2  TAGAGAACAG-CGGGCTCTGGC-TCG-ATGCTGGCTTTCAAGGCGTGTGC  90

seq1  CGCCAAGCTGGCTGAGGCTGAGACTTGCTGGCCCTAGTTGGCAGTGACAG  150
         |||||| ||||| ||||||||||||||  ||||||| ||||||||||
seq2  --GCAAGCT-GCTGAAGCTGAGACTTGCTG--CCTAGTT-GCAGTGACAG  134

seq1  GACTACACTGGAATACATTAAGGAAAACAAGGACTGAGCTGGCCAAGGAG  200
      ||||||||||||||||||  | |||||||| ||||||||| |||||||||
seq2  GACTACACTGGAATACAT--AAGAAAACAA-GACTGAGCT-GCCAAGGAG  180

seq1  TGGGGTGTATAGGAATTAGGTTAATTTGAGGCATGAGGCTTTAAGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGTATAGGAATTAGGTTAATTTGAGGCATGAGGCTTTAAGAGGAA  230

seq1  AAAAAAATGAGTCAATAAAAATTGTTTTCTCACCGCCTTTAATCCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGAGTCAATAAAAATTGTTTTCTCACCGCCTTTAATCCCAGCA  280

seq1  GGCAGACACAGGCACATCTCTATGAGTTTGAGGCTAGCTTGGTCTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACACAGGCACATCTCTATGAGTTTGAGGCTAGCTTGGTCTAAATT  330

seq1  GCAAGTTCCAGGCCTACAAAAGCTATATGGGGTGTGGGGTGGGGTGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCCAGGCCTACAAAAGCTATATGGGGTGTGGGGTGGGGTGTGTC  380

seq1  TCAAAACAAACAAACAAACAAACAAACAAACAATGCTTTCTCTTTGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAAACAAACAAACAAACAAACAAACAATGCTTTCTCTTTGCCAG  430

seq1  ACAGTATTTTTAGTAACCTTGAAATTGTTGATTATTCTGTCCACTTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATTTTTAGTAACCTTGAAATTGTTGATTATTCTGTCCACTTTAGA  480

seq1  GAGGATAAACTGCAGCACGGAGAAGCTAGGTTGCTTCTAGAGATGGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAACTGCAGCACGGAGAAGCTAGGTTGCTTCTAGAGATGGTGGA  530

seq1  GACAGGACTTTACCCAAGGCAGACTCTGAGACTCCCCATTAACTACAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACTTTACCCAAGGCAGACTCTGAGACTCCCCATTAACTACAGTG  580

seq1  TTGTGCGTGAGCCCTGTGGGAGAAGTTCCTGTCCCCGGGTGGAGGAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCGTGAGCCCTGTGGGAGAAGTTCCTGTCCCCGGGTGGAGGAGGAC  630

seq1  TAGCTACTGAGAGGGATCAGAGGACTAATTTGCTGGCTGTCAAAGGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTGAGAGGGATCAGAGGACTAATTTGCTGGCTGTCAAAGGCTGC  680

seq1  CACCTGTGAGGACGTGCATGGGTGTCTGGGAGTGGCTGTGTCACCCTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGAGGACGTGCATGGGTGTCTGGGAGTGGCTGTGTCACCCTGGC  730

seq1  CATGTCCTTTGAAGTGCATTGCTCGTGACAGGGAAGGCTGTGACGGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCTTTGAAGTGCATTGCTCGTGACAGGGAAGGCTGTGACGGTTCA  780

seq1  TATGTCAGGTGTTTCCAGATGTCTGATCTGTGTGGTGGAGGCAAATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGGTGTTTCCAGATGTCTGATCTGTGTGGTGGAGGCAAATATTT  830

seq1  GGGGCTCTAATTGAGTTCTTTACCCAGATTACCTCCTAGTCCTCCCAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCTAATTGAGTTCTTTACCCAGATTACCTCCTAGTCCTCCCAAGG  880

seq1  CCAGAGGAAGCTGCACTTAAAGGACATAGCAGACGCATTTAGGTCAGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGAAGCTGCACTTAAAGGACATAGCAGACGCATTTAGGTCAGGTA  930

seq1  GCTTGTTGAGCACGGTGAGGCAGAGCTGGGTGCAGTGTGTGCCTAGCTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGAGCACGGTGAGGCAGAGCTGGGTGCAGTGTGTGCCTAGCTCC  980

seq1  AGGGCCAGTACTGTGCTTGCTTGGTTGTTTTTTTTCATTGAACCCACTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGTACTGTGCTTGCTTGGTTGTTTTTTTTCATTGAACCCACTAT  1030

seq1  CCTCCTCCCTCAGCTTCTCGAGGGCTGGAATGTGCCTCCTTGCCAGACAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCTCAGCTTCTCGAGGGCTGGAATGTGCCTCCTTGCCAGACAG  1080

seq1  AGGACAGCCTCCCTGCTTCCCAGGGGCTGAAGGCTTTAAACAGTTCCCCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCTCCCTGCTTCCCAGGGGCTGAAGGCTTTAAACAGTTCCCCA  1130

seq1  AAGGTTGGGACATGGAATTC  1170
      ||||||||||||||||||||
seq2  AAGGTTGGGACATGGAATTC  1150

seq1: chr2_158499196_158499306
seq2: B6Ng01-167P21.g_74_184

seq1  AGGTAGGCAGAGGGTTAACGGGTATGTGCCTCAAACTGGTTGGGTTAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCAGAGGGTTAACGGGTATGTGCCTCAAACTGGTTGGGTTAGGG  50

seq1  CTAGAGTATAGAGTCTGGTTTGGCAGGGCTCACACTTCAGCAGGCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTATAGAGTCTGGTTTGGCAGGGCTCACACTTCAGCAGGCTCCTG  100

seq1  GGAGGGGGTGG  111
      |||||||||||
seq2  GGAGGGGGTGG  111