BAC Information

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BAC

Clone NameB6Ng01-170K15
Chromosome2 (Build37)
Map Location 116,201,467 - 116,332,915
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043232, LOC100043236, BC052040, Mrg1, G630016G05Rik, 2810405F15Rik
Downstream geneLOC433464, Tmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170K15.bB6Ng01-170K15.g
ACCDH961319DH961320
length5841,024
definitionDH961319|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K15, 5' end.DH961320|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,332,326 - 116,332,915)(116,201,467 - 116,202,491)
sequence
agatactttatacttctaaaatgcagatttcattctttattataaatttc
agccttttgatagctttattcttttgttttgagtttgtcattttttatct
atcttattaaacagaggtgttgcttctgtatgcctctgctagtttgaaat
gtatgatctagattacgttgatgcttgctcctaaaatctgccacttctag
tgtaggccataatggatgtgttccaatgcacatagtccagcttgttttct
tttctgccagagagaattgaggatttcctcagcttaggaaaagaaaagag
gtgtggtggggtaggctagaggtttagaaacccaaccaattaaatgctga
tttctgttgaggctgcctgctaatgctggacagactatctttgcctgggt
tctcctgattccaaggacatgaccaccaggtactttaagggaaagactca
tccttgctgacttatctctgaaaagctttgtgagttcctttgtcgattgt
agattttaaacccagatcttcaacttcacactcaatcaaccttaaaaatt
ttgtcttacaagcaggggtggaggggggggggtc
gaattctttaaaagggtatagttagggaaaaagacattataagcacattt
tgagagttcctagtaaaaattaagtttatgcaaattatttgttattgaag
acaccattaggcagtattgaagaactaaatttattctgataatcattata
atgatgaaaaaattccttgcttcaataattgatttatgcctcatttaaat
atacagagtggtttcaatataatttcttattagctctaatgatgaatttt
aaagtatcatgactctgaaataaagatgaaaattctccatacaacttatt
gcatttaaatggatttaatatttaatatttaaaaaatcatttggtgtaaa
tagctatcatgaatcatggcaaatatactaagatgtaattaaatgcattt
tccttttcaaatgcatctacttgtttcataataaattatttttgtactct
ttcttcttttaaactatgctattattttggaaattattataaattgtgaa
ataatatcaaaagtaaaatatcagtaaatttaaaaaataactcctcctag
gcaaattcatggtaattgtattattgtttaacatttgcttttatattgca
aattgttttaaatcataatagtaagaactccaaattttaatactaaaaga
gaaaaggcaaaataaaggaaagggacaagacaagattctatgacgaagct
gaacatggtggtacacacctttaaacccagcacttgggaggaagagtctg
gttaatagctgtaggtttgtctagactggtccacgcacttagttcctggc
tagacaaggctacatagtcaggctctgtcttaaaacaaaaattagtatcc
tatgacaattctcaccacatctattagctttattgtatctatgaccaaat
gaacacacacacacactcacaaagcaactgaagagaggactgatggtggt
tcacatttcagggagttcagtcttccattgtttggcctcatggtgtctgg
ggaaaatcactggggtgggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116332326_116332915
seq2: B6Ng01-170K15.b_44_633 (reverse)

seq1  GACCCCCCCCCCTCCACCCCTGCTTGTAAGACAAAATTTTTAAGGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCCCCCCTCCACCCCTGCTTGTAAGACAAAATTTTTAAGGTTGAT  50

seq1  TGAGTGTGAAGTTGAAGATCTGGGTTTAAAATCTACAATCGACAAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGAAGTTGAAGATCTGGGTTTAAAATCTACAATCGACAAAGGAA  100

seq1  CTCACAAAGCTTTTCAGAGATAAGTCAGCAAGGATGAGTCTTTCCCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAAGCTTTTCAGAGATAAGTCAGCAAGGATGAGTCTTTCCCTTAA  150

seq1  AGTACCTGGTGGTCATGTCCTTGGAATCAGGAGAACCCAGGCAAAGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTGGTGGTCATGTCCTTGGAATCAGGAGAACCCAGGCAAAGATAG  200

seq1  TCTGTCCAGCATTAGCAGGCAGCCTCAACAGAAATCAGCATTTAATTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAGCATTAGCAGGCAGCCTCAACAGAAATCAGCATTTAATTGGT  250

seq1  TGGGTTTCTAAACCTCTAGCCTACCCCACCACACCTCTTTTCTTTTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCTAAACCTCTAGCCTACCCCACCACACCTCTTTTCTTTTCCTA  300

seq1  AGCTGAGGAAATCCTCAATTCTCTCTGGCAGAAAAGAAAACAAGCTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGAAATCCTCAATTCTCTCTGGCAGAAAAGAAAACAAGCTGGAC  350

seq1  TATGTGCATTGGAACACATCCATTATGGCCTACACTAGAAGTGGCAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCATTGGAACACATCCATTATGGCCTACACTAGAAGTGGCAGATT  400

seq1  TTAGGAGCAAGCATCAACGTAATCTAGATCATACATTTCAAACTAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGCAAGCATCAACGTAATCTAGATCATACATTTCAAACTAGCAGA  450

seq1  GGCATACAGAAGCAACACCTCTGTTTAATAAGATAGATAAAAAATGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACAGAAGCAACACCTCTGTTTAATAAGATAGATAAAAAATGACAA  500

seq1  ACTCAAAACAAAAGAATAAAGCTATCAAAAGGCTGAAATTTATAATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACAAAAGAATAAAGCTATCAAAAGGCTGAAATTTATAATAAAG  550

seq1  AATGAAATCTGCATTTTAGAAGTATAAAGTATCTGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATCTGCATTTTAGAAGTATAAAGTATCTGAATTC  590

seq1: chr2_116201467_116202491
seq2: B6Ng01-170K15.g_67_1090

seq1  GAATTCTTTAAAAGGGTATAGTTAGGGAAAAAGACATTATAAGCACATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAGGGTATAGTTAGGGAAAAAGACATTATAAGCACATTT  50

seq1  TGAGAGTTCCTAGTAAAAATTAAGTTTATGCAAATTATTTGTTATTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTCCTAGTAAAAATTAAGTTTATGCAAATTATTTGTTATTGAAG  100

seq1  ACACCATTAGGCAGTATTGAAGAACTAAATTTATTCTGATAATCATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTAGGCAGTATTGAAGAACTAAATTTATTCTGATAATCATTATA  150

seq1  ATGATGAAAAAATTCCTTGCTTCAATAATTGATTTATGCCTCATTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAAAAATTCCTTGCTTCAATAATTGATTTATGCCTCATTTAAAT  200

seq1  ATACAGAGTGGTTTCAATATAATTTCTTATTAGCTCTAATGATGAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGTGGTTTCAATATAATTTCTTATTAGCTCTAATGATGAATTTT  250

seq1  AAAGTATCATGACTCTGAAATAAAGATGAAAATTCTCCATACAACTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCATGACTCTGAAATAAAGATGAAAATTCTCCATACAACTTATT  300

seq1  GCATTTAAATGGATTTAATATTTAATATTTAAAAAATCATTTGGTGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAATGGATTTAATATTTAATATTTAAAAAATCATTTGGTGTAAA  350

seq1  TAGCTATCATGAATCATGGCAAATATACTAAGATGTAATTAAATGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCATGAATCATGGCAAATATACTAAGATGTAATTAAATGCATTT  400

seq1  TCCTTTTCAAATGCATCTACTTGTTTCATAATAAATTATTTTTGTACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCAAATGCATCTACTTGTTTCATAATAAATTATTTTTGTACTCT  450

seq1  TTCTTCTTTTAAACTATGCTATTATTTTGGAAATTATTATAAATTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTTAAACTATGCTATTATTTTGGAAATTATTATAAATTGTGAA  500

seq1  ATAATATCAAAAGTAAAATATCAGTAAATTTAAAAAATAACTCCTCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCAAAAGTAAAATATCAGTAAATTTAAAAAATAACTCCTCCTAG  550

seq1  GCAAATTCATGGTAATTGTATTATTGTTTAACATTTGCTTTTATATTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTCATGGTAATTGTATTATTGTTTAACATTTGCTTTTATATTGCA  600

seq1  AATTGTTTTAAATCATAATAGTAAGAACTCCAAATTTTAATACTAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTAAATCATAATAGTAAGAACTCCAAATTTTAATACTAAAAGA  650

seq1  GAAAAGGCAAAATAAAGGAAAGGGACAAGACAAGATTCTATGACGAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCAAAATAAAGGAAAGGGACAAGACAAGATTCTATGACGAAGCT  700

seq1  GAACATGGTGGTACACACCTTTAAACCCAGCACTTGGGAGGAAGAGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGTGGTACACACCTTTAAACCCAGCACTTGGGAGGAAGAGTCTG  750

seq1  GTTAATAGCTGTAGGTTTGTCTAGACTGGTCCACGCACTTAGTTCCTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGCTGTAGGTTTGTCTAGACTGGTCCACGCACTTAGTTCCTGGC  800

seq1  TAGACAAGGCTACATAGTCAGGCCCTGTCTTAAAACAAAAATTAGTATCC  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGACAAGGCTACATAGTCAGGCTCTGTCTTAAAACAAAAATTAGTATCC  850

seq1  TATGACAATTCTCACCACATCTATTAGCTTTATTGTATCTATGACCAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAATTCTCACCACATCTATTAGCTTTATTGTATCTATGACCAAAT  900

seq1  GAACACACACACACACTCACAAAGCAACTGAAGAGAGGACTGATGTTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAACACACACACACACTCACAAAGCAACTGAAGAGAGGACTGATGGTGGT  950

seq1  TCACAGTTTCAGGGAGTTCAGTCTTCCATTGTTTGGCCTCAT-GTGTCTG  999
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  TCACA-TTTCAGGGAGTTCAGTCTTCCATTGTTTGGCCTCATGGTGTCTG  999

seq1  GTGAGAAATCCATGGGGTGGTAGAGA  1025
      | || |||||  |||||||| |||||
seq2  GGGA-AAATCACTGGGGTGGGAGAGA  1024