BAC Information

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BAC

Clone NameB6Ng01-174L19
Chromosome2 (Build37)
Map Location 31,431,573 - 31,558,752
singlet/doubletdoublet
Overlap geneFubp3, LOC100041465, Prdm12, Exosc2
Upstream geneCstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1
Downstream geneAbl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174L19.bB6Ng01-174L19.g
ACCGA002729GA002730
length5511,078
definitionB6Ng01-174L19.b B6Ng01-174L19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,558,196 - 31,558,752)(31,431,573 - 31,432,651)
sequence
agggccagcctgggacacaaaataagacccccatctcaacaaacaaagca
aaaccctcacaatggttttttttttttttttttttttttggtttttcgag
acagggtttctctgtatagccctggctgtcctggaactcactctgtagac
caggctggccttgaacccagaaatctgcctgcctctgcctcccaagtgct
gggattaaacgtatgcgccaccaccgcctggctacaataatttttaatat
tttcaatttctgtgtttgtacctctgtatgtggccacacatgtggtgcag
gtggctaaaaacatgaaaagagggggctgggggctggagctacaggtgct
tgggagcttggaacttgtaatcaaactccagcctctggacaagcaacaag
tgctcttaatctctaaacaatctctccacaacaataatctttagtcattt
taaatacaacactgccaggcagtggtggtgccactccttctgctggagac
ctacataaggacattggaagaaagaagattctctccccctgcttgccctg
t
gaattcttaaatacaaagggaatctctgaagatccatataaaacttaaaa
atatttctagagtgggggcccagtggattattgtgtgtcaggaatgaaga
attcacagctgttctgaagggcagtggagataggatctgatttgggacta
ctgataaagtctaagacgctagatagagctctggctgcttagcaaatcaa
gtgttcctttaacttgtttaagagaagactgggtgctgactttcagctca
tcttgttccagaatcatattctgcatctgtgccctgagtgggctacaagc
gggaccagtggacacaagtctgttttactttgaatagtttctgaggatga
ttaaaaatgttcctggcctgagagtgcttgcctactgtgcatggtttata
ggattgggttcagcccccagagccatataaactaagcctggtggcacata
tctatgcaatcccaggacttgagaggtcgaggcgggatgatcaggaagtt
ccaggttgtcctcagccacatagcaagcatagcgagtgaggccagactgg
gatgcctgagaacctgtccaaaaggtaaaaacgttcccagaacagaacag
tgttggccatccgatgaagacggactcgttaatgggttgtgggccatcac
agtgttacagctgccaacagcttcccactagctttcctgaggataggtta
ttttgctaaagtcaatgcttgttaggactttaagctcctgtttgttgtgg
aggtggttttactgaggcagggttctgctgtgtagttcttctgctggcct
caaactcatgctcctcctgccttagtttcctaagaactggaattataggc
ctgcaacagcaacttaagctaaggtgtttatcttagacccctgttaaagc
cctatgcattagccaactccttagtatgtcttacacagaagtgcagtata
aatgcactctcatggagtgggcaaccttgctttgaacccaataaaaatga
ccagttttattagaatcgagaggcccagcaagatagccttcatgattaag
gaacttgcccccaagccttgaagacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_31558196_31558752
seq2: B6Ng01-174L19.b_46_602 (reverse)

seq1  ACAGGGCAAGCAGGCGGAGAGAATCTTCTTTCTTCCAATGTCCTTATGTA  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACAGGGCAAGCAGGGGGAGAGAATCTTCTTTCTTCCAATGTCCTTATGTA  50

seq1  GGTCTCCAGCAGAAGGAGTGGCACCACCACTGCCTGGCAGTGTTGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAGCAGAAGGAGTGGCACCACCACTGCCTGGCAGTGTTGTATTT  100

seq1  AAAATGACTAAAGATTATTGTTGTGGAGAGATTGCTTAGTGATTAAGAGC  150
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  AAAATGACTAAAGATTATTGTTGTGGAGAGATTGTTTAGAGATTAAGAGC  150

seq1  ACTTGCTGCTTGTCCAGAGGCTGGAGTTTGATTACAAGTTCCAAGCTCAC  200
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTTGTTGCTTGTCCAGAGGCTGGAGTTTGATTACAAGTTCCAAGCTCCC  200

seq1  AAGCACCTGTAGCTCCAGCCCCCAGCCCCCTCTTTTCATGTTCTTAGCCA  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGCACCTGTAGCTCCAGCCCCCAGCCCCCTCTTTTCATGTTTTTAGCCA  250

seq1  CCTGCACCACATGTGTGGCCACATACAGAGGTACAAACACAGAAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACCACATGTGTGGCCACATACAGAGGTACAAACACAGAAATTGAA  300

seq1  AATATTAAAAATTATTGTAGCCAGGCGGTGGTGGCGCATACGTTTAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAAAATTATTGTAGCCAGGCGGTGGTGGCGCATACGTTTAATCC  350

seq1  CAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGGGTTCAAGGCCAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGGGTTCAAGGCCAGCCT  400

seq1  GGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTG  450

seq1  TCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAACCATTGTGAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAACCATTGTGAGGGTT  500

seq1  TTGCTTTGTTTGTTGAGATGGGGGTCTTATTTTGTGTCCCAGGCTGGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGTTTGTTGAGATGGGGGTCTTATTTTGTGTCCCAGGCTGGCCC  550

seq1  TGAATTC  557
      |||||||
seq2  TGAATTC  557

seq1: chr2_31431573_31432651
seq2: B6Ng01-174L19.g_69_1146

seq1  GAATTCTTAAATACAAAGGGAATCTCTGAAGATCCATATAAAACTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATACAAAGGGAATCTCTGAAGATCCATATAAAACTTAAAA  50

seq1  ATATTTCTAGAGTGGGGGCCCAGTGGATTATTGTGTGTCAGGAATGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTAGAGTGGGGGCCCAGTGGATTATTGTGTGTCAGGAATGAAGA  100

seq1  ATTCACAGCTGTTCTGAAGGGCAGTGGAGATAGGATCTGATTTGGGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGCTGTTCTGAAGGGCAGTGGAGATAGGATCTGATTTGGGACTA  150

seq1  CTGATAAAGTCTAAGACGCTAGATAGAGCTCTGGCTGCTTAGCAAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAGTCTAAGACGCTAGATAGAGCTCTGGCTGCTTAGCAAATCAA  200

seq1  GTGTTCCTTTAACTTGTTTAAGAGAAGACTGGGTGCTGACTTTCAGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTTTAACTTGTTTAAGAGAAGACTGGGTGCTGACTTTCAGCTCA  250

seq1  TCTTGTTCCAGAATCATATTCTGCATCTGTGCCCTGAGTGGGCTACAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCCAGAATCATATTCTGCATCTGTGCCCTGAGTGGGCTACAAGC  300

seq1  GGGACCAGTGGACACAAGTCTGTTTTACTTTGAATAGTTTCTGAGGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAGTGGACACAAGTCTGTTTTACTTTGAATAGTTTCTGAGGATGA  350

seq1  TTAAAAATGTTCCTGGCCTGAGAGTGCTTGCCTACTGTGCATGGTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGTTCCTGGCCTGAGAGTGCTTGCCTACTGTGCATGGTTTATA  400

seq1  GGATTGGGTTCAGCCCCCAGAGCCATATAAACTAAGCCTGGTGGCACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGGTTCAGCCCCCAGAGCCATATAAACTAAGCCTGGTGGCACATA  450

seq1  TCTATGCAATCCCAGGACTTGAGAGGTCGAGGCGGGATGATCAGGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCAATCCCAGGACTTGAGAGGTCGAGGCGGGATGATCAGGAAGTT  500

seq1  CCAGGTTGTCCTCAGCCACATAGCAAGCATAGCGAGTGAGGCCAGACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGTCCTCAGCCACATAGCAAGCATAGCGAGTGAGGCCAGACTGG  550

seq1  GATGCCTGAGAACCTGTCCAAAAGGTAAAAACGTTCCCAGAACAGAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGAGAACCTGTCCAAAAGGTAAAAACGTTCCCAGAACAGAACAG  600

seq1  TGTTGGCCATCCGATGAAGACGGACTCGTTAATGGGTTGTGGGCCATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCCATCCGATGAAGACGGACTCGTTAATGGGTTGTGGGCCATCAC  650

seq1  AGTGTTACAGCTGCCAACAGCTTCCCACTAGCTTTCCTGAGGATAGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTACAGCTGCCAACAGCTTCCCACTAGCTTTCCTGAGGATAGGTTA  700

seq1  TTTTGCTAAAGTCAATGCTTGTTAGGACTTTAAGCTCCTGTTTGTTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAAAGTCAATGCTTGTTAGGACTTTAAGCTCCTGTTTGTTGTGG  750

seq1  AGGTGGTTTTACTGAGGCAGGGTTCTGCTGTGTAGTTCTTCTGCTGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTTTACTGAGGCAGGGTTCTGCTGTGTAGTTCTTCTGCTGGCCT  800

seq1  CAAACTCATGCTCCTCCTGCCTTAGTTTCCTAAGAACTGGAATTATAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCATGCTCCTCCTGCCTTAGTTTCCTAAGAACTGGAATTATAGGC  850

seq1  CTGCAACAGCAACTT-AGCTAAGGTGTTTTATCTTAGA-CCCTGTTAAGG  898
      ||||||||||||||| |||||||||| ||||||||||| ||||||||| |
seq2  CTGCAACAGCAACTTAAGCTAAGGTG-TTTATCTTAGACCCCTGTTAAAG  899

seq1  CCCTATGCATTAGCCAACTCCTTAGTATGTCTTTACACAG-AGTGCAGTA  947
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CCCTATGCATTAGCCAACTCCTTAGTATGTC-TTACACAGAAGTGCAGTA  948

seq1  TAAATGCACTCTTCATGGAGTTGGGCACCTTGCCTTGGACCCAAATAAAA  997
      ||||||||||| ||||||||| ||  ||||||| ||| |||| |||||||
seq2  TAAATGCACTC-TCATGGAGTGGGCAACCTTGCTTTGAACCC-AATAAAA  996

seq1  ATGACCAAGTTTTTATAGAATCGAGAGGGCTAGCAAGATAG-CTTCATGG  1046
      |||||| ||||||  ||||||||||||| | |||||||||| |||||| |
seq2  ATGACC-AGTTTTATTAGAATCGAGAGGCCCAGCAAGATAGCCTTCAT-G  1044

seq1  ATTAAGGGACTTGCCACCAAG-CTTGAGGACTTG  1079
      ||||||| ||||||| ||||| ||||| ||||||
seq2  ATTAAGGAACTTGCCCCCAAGCCTTGAAGACTTG  1078