BAC Information

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BAC

Clone NameB6Ng01-174O10
Chromosome2 (Build37)
Map Location 76,445,065 - 76,568,152
singlet/doubletdoublet
Overlap genePrkra, Dfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174O10.bB6Ng01-174O10.g
ACCGA002854GA002855
length8621,029
definitionB6Ng01-174O10.b B6Ng01-174O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,445,065 - 76,445,926)(76,567,131 - 76,568,152)
sequence
gaattcttctctccaggaaaagcaaagccctccacattcagccattcttc
ctccaagcctcccaaatgcttaattctctcctgtgtctctgagagttctc
tcatgctgtgacagtgtcgggggttctctcatgctgtgacagtgttgggg
ttctcttcatgctgtgacagtatttggaggttctattttaagcttcattt
ttttgaatgctctcagttatagcctggcatagtggctcatcccttcaatc
ccaggactcaggaggcagaggatggaggaccaaccagcctggtctgcaga
gttccaggaccatgagttctaaatgacaccatgtcttaaaaataaacaaa
agccaaagagaaacaaaagcaaaacatctctccattgctcttttcttatt
ctcttcccacccatatagcataaagtgctgttacatttattgttatattt
attatatgttgctaatattccctctataaaaatctacctgtacaagatct
ctgcagatcagccatccaaagtatcacaaagcattcttcctgatattcaa
agtacaggaagctggcagagaacatttctgaattaaccttcctattcttc
tgactgatgatgtacattatattactgatttgcatatgttgaaccaatgt
catatcactgggatgaaaccacttggttgtaatgtgtgatctttttaata
tgttcatcagacatatgatatacttttcaaaatgtttaccagacacattg
ccttagttagggttatactgctgaaatgaaacatcatgaacaaaagcaaa
ctagtgtggaagggtgtatctggcttataataagtgatggggaaacctcg
gagaaagtcagg
gaattccgagtgtctgctagaaatgagaaaggacagagcgaccctgtcac
tattgggccacttacagtgaaggagcttgtaattacacctgaagttgact
tgtcagaaatccctggggcacaaatatctgtgagaattggacataacgta
caccttgaattaccttataaaggaaaacccaagccatccatcagttggct
gaaagatggcttgccactgaaggaaagtgaatatgttcgtttcagtaaga
cagaaaacaaaatcaccttgagtattaagaattcgaagaaagagcatgga
gggaaatatactgttattcttgataatgcagtgtgtagaaactcattccc
cattacaatcatcaccctcggcccaccgtcaaagcccaaaggacccatta
gatttgatgaaatcaaggctgacagcgccatcatgtcatgggacatacct
gaagatgacggaggaggagaaatcacctgttacagcattgagaagcggga
agcatcacaaacaaattggaagatggtgtgttcaagtgttgccagaacaa
ctttcaaagtttccaatctggtcaaagattctgaataccagtttagagtt
agagcagaaaatagatatggagtcagtgagccacttgcctcaaatatcat
cgtggcaaaacaccaattcaggattcctggtcctccaggaaaagccagtc
atctacaatgtaacttcggatggcatgtcactaacttgggatgcaccagt
ttatgatggtggttcagaagttactggattccatgttgaaaagaaagaaa
gaaacagcattctttgggcaaagggttaacacatcaccaatatctgggag
agaatacagagctactggcttaatagaaagggctggactatcaattccgt
gtatatgctgagaattctgctggcctgagctcacctagtgacccaagcaa
gttttacattagctgtttccccagtaggtaagtgactgttacctcaaata
ttatttaattagggcaaccagacatatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76445065_76445926
seq2: B6Ng01-174O10.b_35_896

seq1  GAATTCTTCTCTCCAGGAAAAGCAAAGCCCTCCACATTCAGCCATTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCTCCAGGAAAAGCAAAGCCCTCCACATTCAGCCATTCTTC  50

seq1  CTCCAAGCCTCCCAAATGCTTAATTCTCTCCTGTGTCTCTGAGAGTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGCCTCCCAAATGCTTAATTCTCTCCTGTGTCTCTGAGAGTTCTC  100

seq1  TCATGCTGTGACAGTGTCGGGGGTTCTCTCATGCTGTGACAGTGTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGTGACAGTGTCGGGGGTTCTCTCATGCTGTGACAGTGTTGGGG  150

seq1  TTCTCTTCATGCTGTGACAGTATTTGGAGGTTCTATTTTAAGCTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCATGCTGTGACAGTATTTGGAGGTTCTATTTTAAGCTTCATTT  200

seq1  TTTTGAATGCTCTCAGTTATAGCCTGGCATAGTGGCTCATCCCTTCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATGCTCTCAGTTATAGCCTGGCATAGTGGCTCATCCCTTCAATC  250

seq1  CCAGGACTCAGGAGGCAGAGGATGGAGGACCAACCAGCCTGGTCTGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTCAGGAGGCAGAGGATGGAGGACCAACCAGCCTGGTCTGCAGA  300

seq1  GTTCCAGGACCATGAGTTCTAAATGACACCATGTCTTAAAAATAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGACCATGAGTTCTAAATGACACCATGTCTTAAAAATAAACAAA  350

seq1  AGCCAAAGAGAAACAAAAGCAAAACATCTCTCCATTGCTCTTTTCTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGAGAAACAAAAGCAAAACATCTCTCCATTGCTCTTTTCTTATT  400

seq1  CTCTTCCCACCCATATAGCATAAAGTGCTGTTACATTTATTGTTATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCACCCATATAGCATAAAGTGCTGTTACATTTATTGTTATATTT  450

seq1  ATTATATGTTGCTAATATTCCCTCTATAAAAATCTACCTGTACAAGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTTGCTAATATTCCCTCTATAAAAATCTACCTGTACAAGATCT  500

seq1  CTGCAGATCAGCCATCCAAAGTATCACAAAGCATTCTTCCTGATATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATCAGCCATCCAAAGTATCACAAAGCATTCTTCCTGATATTCAA  550

seq1  AGTACAGGAAGCTGGCAGAGAACATTTCTGAATTAACCTTCCTATTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGAAGCTGGCAGAGAACATTTCTGAATTAACCTTCCTATTCTTC  600

seq1  TGACTGATGATGTACATTATATTACTGATTTGCATATGTTGAACCAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATGATGTACATTATATTACTGATTTGCATATGTTGAACCAATGT  650

seq1  CATATCACTGGGATGAAACCACTTGGTTGTAATGTGTGATCTTTTTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACTGGGATGAAACCACTTGGTTGTAATGTGTGATCTTTTTAATA  700

seq1  TGTTCATCAGACATATGATATACTTTTCAAAATGTTTACCAGACACATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATCAGACATATGATATACTTTTCAAAATGTTTACCAGACACATTG  750

seq1  CCTTAGTTAGGGTTATACTGCTGAAATGAAACATCATGAACAAAAGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTTAGGGTTATACTGCTGAAATGAAACATCATGAACAAAAGCAAA  800

seq1  CTAGTGTGGAAGGGTGTATCTGGCTTATAATAAGTGATGGGGAAACCTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTGGAAGGGTGTATCTGGCTTATAATAAGTGATGGGGAAACCTCG  850

seq1  GAGAAAGTCAGG  862
      ||||||||||||
seq2  GAGAAAGTCAGG  862

seq1: chr2_76567131_76568152
seq2: B6Ng01-174O10.g_68_1096 (reverse)

seq1  TAATATGTCTGGTTG-CCTAATTAAAT-ATATTTGA-GTAACAGTCACTT  47
      ||||||||||||||| ||||||||||| |||||||| |||||||||||||
seq2  TAATATGTCTGGTTGCCCTAATTAAATAATATTTGAGGTAACAGTCACTT  50

seq1  ACCTACTGGGGAAACAGCTAATGT-AAACTTGCTTGGGTCACTAGGTGAG  96
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACCTACTGGGGAAACAGCTAATGTAAAACTTGCTTGGGTCACTAGGTGAG  100

seq1  CTCAGGCCAGCAGAATTCTCAGCATATACACGGAATTGATAGTCCAGCCC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCAGCAGAATTCTCAGCATATACACGGAATTGATAGTCCAGCCC  150

seq1  -TTCTATTAAGCCAGTAGCTCTGTATTCTCTCCCAGATATTGGTGATGTG  195
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTAAGCCAGTAGCTCTGTATTCTCTCCCAGATATTGGTGATGTG  200

seq1  TTAACCCTTTG-CCAAAGAATGCTGTTTCTTTCTTTCTTTTCAACATGGA  244
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCTTTGCCCAAAGAATGCTGTTTCTTTCTTTCTTTTCAACATGGA  250

seq1  ATCCAGTAACTTCTGAACCACCATCATAAACTGGTGCATCCCAAGTTAGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTAACTTCTGAACCACCATCATAAACTGGTGCATCCCAAGTTAGT  300

seq1  GACATGCCATCCGAAGTTACATTGTAGATGACTGGC-TTTCCTGGAGGAC  343
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GACATGCCATCCGAAGTTACATTGTAGATGACTGGCTTTTCCTGGAGGAC  350

seq1  CAGGAATCCTGAATTGGTGTTTTGCCACGATGATATTTGAGGCAAGTGGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCCTGAATTGGTGTTTTGCCACGATGATATTTGAGGCAAGTGGC  400

seq1  TCACTGACTCCATATCTATTTTCTGCTCTAACTCTAAACTGGTATTCAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGACTCCATATCTATTTTCTGCTCTAACTCTAAACTGGTATTCAGA  450

seq1  ATCTTTGACCAGATTGGAAACTTTGAAAGTTGTTCTGGCAACACTTGAAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGACCAGATTGGAAACTTTGAAAGTTGTTCTGGCAACACTTGAAC  500

seq1  ACACCATCTTCCAATTTGTTTGTGATGCTTCCCGCTTCTCAATGCTGTAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCTTCCAATTTGTTTGTGATGCTTCCCGCTTCTCAATGCTGTAA  550

seq1  CAGGTGATTTCTCCTCCTCCGTCATCTTCAGGTATGTCCCATGACATGAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATTTCTCCTCCTCCGTCATCTTCAGGTATGTCCCATGACATGAT  600

seq1  GGCGCTGTCAGCCTTGATTTCATCAAATCTAATGGGTCCTTTGGGCTTTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTGTCAGCCTTGATTTCATCAAATCTAATGGGTCCTTTGGGCTTTG  650

seq1  ACGGTGGGCCGAGGGTGATGATTGTAATGGGGAATGAGTTTCTACACACT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGGCCGAGGGTGATGATTGTAATGGGGAATGAGTTTCTACACACT  700

seq1  GCATTATCAAGAATAACAGTATATTTCCCTCCATGCTCTTTCTTCGAATT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATCAAGAATAACAGTATATTTCCCTCCATGCTCTTTCTTCGAATT  750

seq1  CTTAATACTCAAGGTGATTTTGTTTTCTGTCTTACTGAAACGAACATATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACTCAAGGTGATTTTGTTTTCTGTCTTACTGAAACGAACATATT  800

seq1  CACTTTCCTTCAGTGGCAAGCCATCTTTCAGCCAACTGATGGATGGCTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCCTTCAGTGGCAAGCCATCTTTCAGCCAACTGATGGATGGCTTG  850

seq1  GGTTTTCCTTTATAAGGTAATTCAAGGTGTACGTTATGTCCAATTCTCAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCCTTTATAAGGTAATTCAAGGTGTACGTTATGTCCAATTCTCAC  900

seq1  AGATATTTGTGCCCCAGGGATTTCTGACAAGTCAACTTCAGGTGTAATTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGTGCCCCAGGGATTTCTGACAAGTCAACTTCAGGTGTAATTA  950

seq1  CAAGCTCCTTCACTGTAAGTGGCCCAATAGTGACAGGGTCGCTCTGTCCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCCTTCACTGTAAGTGGCCCAATAGTGACAGGGTCGCTCTGTCCT  1000

seq1  TTCTCATTTCTAGCAGACACTCGGAATTC  1022
      |||||||||||||||||||||||||||||
seq2  TTCTCATTTCTAGCAGACACTCGGAATTC  1029