BAC Information

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BAC

Clone NameB6Ng01-176O14
Chromosome2 (Build37)
Map Location 80,435,723 - 80,553,694
singlet/doubletdoublet
Overlap geneLOC624223, Dusp19, LOC672381, Nup35
Upstream geneSsfa2, Ppp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1
Downstream geneLOC103324, LOC668027, LOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176O14.bB6Ng01-176O14.g
ACCGA004323GA004324
length4091,127
definitionB6Ng01-176O14.b B6Ng01-176O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,435,723 - 80,436,137)(80,552,560 - 80,553,694)
sequence
actctgtagaccaggttacaggtcactcagagacccacctgcctctgcct
cttgagtgctgggattagaggcttgtacaatcaccgccaggctccctcct
tctattttgatttttggttttgtttttgagacagaggtttgaaatgtggc
ccatgttgacctcaaagtcatagtgaacctccagcctcagccacctgagt
cctgggattatgggtgtgcaccacagtgcccagccagctttacatcatta
atggtatttttccaaacttcagtatgacatcatttatttgcttataatct
aaaccagactttttaaactcatggtaggataagaattaaaatataaataa
taataaacagcttttccctctatttttaaaactatttaaatttatttatg
agtgtgtgt

gaattcagtagctaaggagctgtgatcttttcactgagtcatgttccttt
ctttttcatatttcttgtgtttctgtgatatgatttgtgcatctgttgga
catctcttccagtttggaatgatagtcatattgggcatgtcacatttaaa
gactctatcccaataccacttcacaaattgaaaacaaaataggatagtag
caacaaaagcaaacacttcaagatagagaaatatagctaaagtctattga
agcatcctaatacattaccaatggtcatgaaccagaaaaataggaaaacc
aatgtagaagatgctatgatattagaatcatttgcatgtatatatggatg
tactgtatgagacaacaggaaaatggaggaaaaacaaggttaaatacatg
aaaatgaaaagaaatggaaacacagagaacaactttggacaaaaaagaaa
agagagtaagaaattagaaaaaaaaaatgtaaaataaaagaaacgcacac
gcacaaaatttccagtaataaggatatttgactacaaaattagataaatg
taagaaaggaaagaaaaattaaaagtgagttctttttttaatgaataaga
taaattcaaattaacatttgaaacatagtgcagatgaaaagaagaaagtg
gggaaaacgtgggggacaaaaattaagagtaaaattcagaagattgcata
ataatgaaaaagactaagtaggtgcataaaaggaaataaaaacatatgat
aaagtaaaaataatatttttaaaaggaaaaaagggggaacaaggggcaaa
aaatattgtagctgcttcttttctttctgggtcctaaaaagttggtgaag
aggaggctcagctgaagctgaagctgtggcaatgggatgctccaagggtt
ttgtgctggtgctgagcctgcgttaaaccatgagtgaccagtgaagaaga
agtacagaccagcagagctgttctttcacttagcagtttcttgtcttgca
tacagggcattaggcttgcgttaggctgggaagctcatgtctagctggga
gacctgtctcaaattgagtttagtagtcaaaaaccacagcacttggaact
gtcgaagaagcctgcctcctgacagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80435723_80436137
seq2: B6Ng01-176O14.b_47_461

seq1  GAATTCACTCTGTAGACCAGGTTACAGGTCACTCAGAGACCCACCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGTTACAGGTCACTCAGAGACCCACCTGCCT  50

seq1  CTGCCTCTTGAGTGCTGGGATTAGAGGCTTGTACAATCACCGCCAGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTTGAGTGCTGGGATTAGAGGCTTGTACAATCACCGCCAGGCTC  100

seq1  CCTCCTTCTATTTTGATTTTTGGTTTTGTTTTTGAGACAGAGGTTTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTATTTTGATTTTTGGTTTTGTTTTTGAGACAGAGGTTTGAAA  150

seq1  TGTGGCCCATGTTGACCTCAAAGTCATAGTGAACCTCCAGCCTCAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCATGTTGACCTCAAAGTCATAGTGAACCTCCAGCCTCAGCCAC  200

seq1  CTGAGTCCTGGGATTATGGGTGTGCACCACAGTGCCCAGCCAGCTTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCTGGGATTATGGGTGTGCACCACAGTGCCCAGCCAGCTTTACA  250

seq1  TCATTAATGGTATTTTTCCAAACTTCAGTATGACATCATTTATTTGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATGGTATTTTTCCAAACTTCAGTATGACATCATTTATTTGCTTA  300

seq1  TAATCTAAACCAGACTTTTTAAACTCATGGTAGGATAAGAATTAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAAACCAGACTTTTTAAACTCATGGTAGGATAAGAATTAAAATAT  350

seq1  AAATAATAATAAACAGCTTTTCCCTCTATTTTTAAAACTATTTAAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAATAAACAGCTTTTCCCTCTATTTTTAAAACTATTTAAATTTA  400

seq1  TTTATGAGTGTGTGT  415
      |||||||||||||||
seq2  TTTATGAGTGTGTGT  415


seq1: chr2_80552560_80553694
seq2: B6Ng01-176O14.g_66_1192 (reverse)

seq1  TTCTGTCATGAAGGCAGGCTTTCCTTCCGAACAGTTCTCAGTGCTGTGGT  50
      |||||||| | ||||||||||  ||||   |||||||  |||||||||||
seq2  TTCTGTCA-GGAGGCAGGCTT--CTTC--GACAGTTCCAAGTGCTGTGGT  45

seq1  TTTTTGTACTACT-AACTCATTTTGGAGACAGTTCTCCCCAGCTAGAACA  99
      ||||   |||||| |||||| ||| ||||||| ||| ||||||||| |||
seq2  TTTT--GACTACTAAACTCAATTT-GAGACAGGTCT-CCCAGCTAG-ACA  90

seq1  TGAGCCTTCCCAGCCTACCGCAAAGCTAAATGCCCTGGTATGCAAAGACA  149
      |||| |||||||||||| ||| ||||  |||||||| |||||| ||||||
seq2  TGAG-CTTCCCAGCCTAACGC-AAGCCTAATGCCCT-GTATGC-AAGACA  136

seq1  AGAAACTGCTAAGTGAA--GACAGCTCTGCTGGTCTGTAC-TCT--CTCA  194
      |||||||||||||||||   |||||||||||||||||||| |||   |||
seq2  AGAAACTGCTAAGTGAAAGAACAGCTCTGCTGGTCTGTACTTCTTCTTCA  186

seq1  CTGGTCACTCATGGTTAAACGCAGGCTCAGCACCAGCAC-AAACCCTTGG  243
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  CTGGTCACTCATGGTTTAACGCAGGCTCAGCACCAGCACAAAACCCTTGG  236

seq1  AGCAT-CCATTGCCCACAGCTTCAGCTTCAGCTGAGCCTCCTCTTCACCA  292
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCATTG-CCACAGCTTCAGCTTCAGCTGAGCCTCCTCTTCACCA  285

seq1  ACTTTTTAGGACCCAGAAAGAAAAGAAGCAGCTACAATATTTTTTGCCCC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAGGACCCAGAAAGAAAAGAAGCAGCTACAATATTTTTTGCCCC  335

seq1  TTGTTCCCCCCTTTTTTCCTTTTAAAAATATTATTTTTACTTTATCATAT  392
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTT-CCCCCTTTTTTCCTTTTAAAAATATTATTTTTACTTTATCATAT  384

seq1  GTTTTTATTTCCTTTTATGCACCTACTTAGTCTTTTTCATTATTATGCAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTTCCTTTTATGCACCTACTTAGTCTTTTTCATTATTATGCAA  434

seq1  TCTTCTGAATTTTACTCTTAATTTTTGTCCCCCACGTTTTCCCCACTTTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGAATTTTACTCTTAATTTTTGTCCCCCACGTTTTCCCCACTTTC  484

seq1  TTCTTTTCATCTGCACTATGTTTCAAATGTTAATTTGAATTTATCTTATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCATCTGCACTATGTTTCAAATGTTAATTTGAATTTATCTTATT  534

seq1  CATTAAAAAAAGAACTCACTTTTAATTTTTCTTTCCTTTCTTACATTTAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAAAGAACTCACTTTTAATTTTTCTTTCCTTTCTTACATTTAT  584

seq1  CTAATTTTGTAGTCAAATATCCTTATTACTGGAAATTTTGTGCGTGTGCG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTGTAGTCAAATATCCTTATTACTGGAAATTTTGTGCGTGTGCG  634

seq1  TTTCTTTTATTTTACATTTTTTTTTTCTAATTTCTTACTCTCTTTTCTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTATTTTACATTTTTTTTTTCTAATTTCTTACTCTCTTTTCTTT  684

seq1  TTTGTCCAAAGTTGTTCTCTGTGTTTCCATTTCTTTTCATTTTCATGTAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCAAAGTTGTTCTCTGTGTTTCCATTTCTTTTCATTTTCATGTAT  734

seq1  TTAACCTTGTTTTTCCTCCATTTTCCTGTTGTCTCATACAGTACATCCAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTGTTTTTCCTCCATTTTCCTGTTGTCTCATACAGTACATCCAT  784

seq1  ATATACATGCAAATGATTCTAATATCATAGCATCTTCTACATTGGTTTTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATGCAAATGATTCTAATATCATAGCATCTTCTACATTGGTTTTC  834

seq1  CTATTTTTCTGGTTCATGACCATTGGTAATGTATTAGGATGCTTCAATAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTCTGGTTCATGACCATTGGTAATGTATTAGGATGCTTCAATAG  884

seq1  ACTTTAGCTATATTTCTCTATCTTGAAGTGTTTGCTTTTGTTGCTACTAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGCTATATTTCTCTATCTTGAAGTGTTTGCTTTTGTTGCTACTAT  934

seq1  CCTATTTTGTTTTCAATTTGTGAAGTGGTATTGGGATAGAGTCTTTAAAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTGTTTTCAATTTGTGAAGTGGTATTGGGATAGAGTCTTTAAAT  984

seq1  GTGACATGCCCAATATGACTATCATTCCAAACTGGAAGAGATGTCCAACA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATGCCCAATATGACTATCATTCCAAACTGGAAGAGATGTCCAACA  1034

seq1  GATGCACAAATCATATCACAGAAACACAAGAAATATGAAAAAGAAAGGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACAAATCATATCACAGAAACACAAGAAATATGAAAAAGAAAGGAA  1084

seq1  CATGACTCAGTGAAAAGATCACAGCTCCTTAGCTACTGAATTC  1135
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTCAGTGAAAAGATCACAGCTCCTTAGCTACTGAATTC  1127


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