BAC Information

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BAC

Clone NameB6Ng01-178N14
Chromosome2 (Build37)
Map Location 35,993,514 - 35,994,352
singlet/doubletsinglet
Overlap geneLOC100042236, Mrrf
Upstream geneRab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18
Downstream geneLOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178N14.bB6Ng01-178N14.g
ACCGA005723GA005724
length1,222841
definitionB6Ng01-178N14.b B6Ng01-178N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataccctactgtcataaatggacagatcatggaaacaccaact
aaatggagacacatttaaactaacagaagttatgaactttaatttaattg
gtatctatagaacatttcattctaaaacaaaagaatgcaccttcttctca
gcacctcatgatacctcagcaccttcttccaaatttaccatataatcggt
cacaaaacaggcctcaacaagaaggttgaaatattcccatgcatcctatc
agatcactagagactaagactggtcttcaatagcaacaaaaacaacagaa
agtccacatacacatggaagactggtcttcaatagcaacaaaaacaacag
aaagcccacataaacatggaagactggtcttcaatagcaacaaaaacaac
agaaagcccacagacacatggaagctgaacagtgtactcaatgataactt
ggtcaaggaagaaacaaaaaagaagattaaagactttttagaatttaatg
aaaatgaaggctcaatatacccttatgggtcacaatgaaagcagtgctaa
gaggaaaactgatagccctgagtgcctccaaaaagaaactgaagagagca
tgccctaacagcttaacagttcttaatatctgaaagttctagaacaaaaa
gaagcaaatacacccaagaggagtagacaggaaataatcaaactcagggc
taaaatcaaacaagtagaaacaaataaaaactatacaaagaagcagcaaa
accaggagctggttctttgagaaaatcaacaagctagatagatgaaccct
tagccagactaaccagagagcacaaagacaatatccaaattaacaaaatc
agaaatgaaaggggagatataacaacagaaactgaggaatttttttaaaa
aatcatcagatcctctacaaaagcctatactcaacacaactgggaaaatc
agatgaaatgggacattttctagacaataccaaattacctaggttaaatc
aggatcagataaaccaatctaaacagtcccatacactaagaaatagcagc
agtcaattaaaagtctcccaacaagaaaaaaaggcccaagacccagatgg
gtttagtgcagattctatcagaccttcaattgaactaaagcatactcttc
aaacctatccaaatagaattgaaggatacctaccaaattctattctatgg
aaggccaccaggttaacacgtc
gaattccaaagttgcatgtgatagggttgatgaggcgggtacattggaat
ccaggtgtcctagtctttacgtgaagtctttgtccactattcctcctttg
gcgtgtgccaaggacatttggatgttgtattgagtcaggtattccaaata
cctttctttacatggtactgagtttgtaaagaagcacaccatgttccaag
cagagaactggaaatccaggggataacggaagcagtgttgagaaatagaa
cccaggaccagccatcagaggtgtagattccaactctggtgccagcattt
tgacatttggcaaggatttaatctttgtggaagtccattatcatacttag
cacatttgtatgatgtctttatttttgtactatactaagtacagggtaca
gtaatagacaagtaggttagtaggtagattcgtgtactagagctgttgtg
aagtgccagcagtcatatggagatatttagataaggatcaagtaattata
catatttacttttattgttaaaaattatgtgctgtgatgaagtattggca
tgaaagctgcatttcaggaaatgtgaccagtttagttggaagagctggcc
aatgaccctgtgctctgacagaatgatgataaagaagaatggatggtaaa
gagataaagggagaacattccaagcagggactagggatgcgggtggcgca
cgcctttaatcccagcactcaggaggcagaggcaagcggattatctgagt
tcaaagccagcctggttatagactgagttccaggatgggccaagactaca
cagagaaacgttgtcttggtcaaacccaaaaaaaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_35993514_35994352
seq2: B6Ng01-178N14.g_67_907

seq1  GAATTCCAAAGTTGCATGTGATAGGGTTGATGAGGCGGGTACATTGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTTGCATGTGATAGGGTTGATGAGGCGGGTACATTGGAAT  50

seq1  CCAGGTGTCCTAGTCTTTACGTGAAGTCTTTGTCCACTATTCCTCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGTCCTAGTCTTTACGTGAAGTCTTTGTCCACTATTCCTCCTTTG  100

seq1  GCGTGTGCCAAGGACATTTGGATGTTGTATTGAGTCAGGTATTCCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTGCCAAGGACATTTGGATGTTGTATTGAGTCAGGTATTCCAAATA  150

seq1  CCTTTCTTTACATGGTACTGAGTTTGTAAAGAAGCACACCATGTTCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTACATGGTACTGAGTTTGTAAAGAAGCACACCATGTTCCAAG  200

seq1  CAGAGAACTGGAAATCCAGGGGATAACGGAAGCAGTGTTGAGAAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACTGGAAATCCAGGGGATAACGGAAGCAGTGTTGAGAAATAGAA  250

seq1  CCCAGGACCAGCCATCAGAGGTGTAGATTCCAACTCTGGTGCCAGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACCAGCCATCAGAGGTGTAGATTCCAACTCTGGTGCCAGCATTT  300

seq1  TGACATTTGGCAAGGATTTAATCTTTGTGGAAGTCCATTATCATACTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTGGCAAGGATTTAATCTTTGTGGAAGTCCATTATCATACTTAG  350

seq1  CACATTTGTATGATGTCTTTATTTTTGTACTATACTAAGTACAGGGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGTATGATGTCTTTATTTTTGTACTATACTAAGTACAGGGTACA  400

seq1  GTAATAGACAAGTAGGTTAGTAGGTAGATTCGTGTACTAGAGCTGTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGACAAGTAGGTTAGTAGGTAGATTCGTGTACTAGAGCTGTTGTG  450

seq1  AAGTGCCAGCAGTCATATGGAGATATTTAGATAAGGATCAAGTAATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCAGCAGTCATATGGAGATATTTAGATAAGGATCAAGTAATTATA  500

seq1  CATATTTACTTTTATTGTTAAAAATTATGTGCTGTGATGAAGTATTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACTTTTATTGTTAAAAATTATGTGCTGTGATGAAGTATTGGCA  550

seq1  TGAAAGCTGCATTTCAGGAAATGTGACCAGTTTAGTTGGAAGAGCTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTGCATTTCAGGAAATGTGACCAGTTTAGTTGGAAGAGCTGGCC  600

seq1  AATGACCCTGTGCTCTGACAGAATGATGATAAAGAAGAATGGATGGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCCTGTGCTCTGACAGAATGATGATAAAGAAGAATGGATGGTAAA  650

seq1  GAGATAAAGGGAGAACATTCCAAGCAGGGACTAGGGATGCGGGTGGCGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGGGAGAACATTCCAAGCAGGGACTAGGGATGCGGGTGGCGCA  700

seq1  CGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAAGCGGATTATCTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAAGCGGATTATCTGAGT  750

seq1  TCAAAGCCAGCCTGGTTATAGACTGAGTTCCAGGAT-GGCCAAGACTACA  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCAAAGCCAGCCTGGTTATAGACTGAGTTCCAGGATGGGCCAAGACTACA  800

seq1  CAGAGAAACGTTGTCTT-GTCAAACCAAAAAAAAAAAAAAA  839
      ||||||||||||||||| |||||||| ||||||||||||||
seq2  CAGAGAAACGTTGTCTTGGTCAAACCCAAAAAAAAAAAAAA  841