BAC Information

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BAC

Clone NameB6Ng01-181M08
Chromosome2 (Build37)
Map Location 140,962,761 - 141,090,088
singlet/doubletdoublet
Overlap genenone
Upstream geneEsf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181M08.bB6Ng01-181M08.g
ACCGA007844GA007845
length1,1981,115
definitionB6Ng01-181M08.b B6Ng01-181M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,088,873 - 141,090,088)(140,962,761 - 140,963,881)
sequence
gaattccaaactgtgtatttttgagtaatatggggtatttttcacatttc
tttaaaaaatagattttccatgatcatatattttattacataacaaaata
taaatttatatcaaactgattaatttgtgactgctactgcttatatgaaa
gataagcaaaagtctaagaaaaatagatcaggttaaggaaaaatacttac
aaatagtaggcactctggtagaatgcacatatgtgtacactgatcgtgtg
cataccatacctcactcactcgcacttctcagtcactgtactaacaggag
caaatgccattggtccaacaatacagtgcagacatttccacttttcctca
cactaaacgggatgttatctttaccctctaataactgtctcttgctaaaa
atttatgactaaaaagcaagtcattcatgtttaaagtccagaagctaaaa
agcttagcccttatctaactataatgtacaattaatatggtttggtcttc
cttcacaactaactactgtcactctcaattaacttttctaggaagttttt
caattaacgctagagttcaaattagttaagcacagtagcacagggtggca
cagtaatgggactgcttccatgcttcttaattttctttgacaaaggacaa
caacaaaatataattctacaggggggatagatttgttctgtttcatcttt
gccacttgtaactctgccagtttctcctcagaggtctaatttcttggaca
tatttagagaagccatttttatcatcccacatctgaatgagattcattct
ctttctgctttccacatcataccagctttctgttcctcagaagcatttgt
agctgagaagtgagattacattgctagagatgtcagaagcagctctttgt
caccacctgccatgtcaaataaacttcccaaggtaaagcagtgggtcaga
ggcaagatagcaaggctgttctcgctctttttaaattatgcaccagattg
gcataagtaaatgctagccaaatttccacttcatacccatataacaatga
agagagcataatttataagcaaatgaaaaccttcaatagactactaatac
ttttaaaataatagctgaacgctgatctgaactctaatctgctcagaatg
attctaacgatctagaccaatgggcagtcagtgcatataaaaatttac

gaattcttttaaaattgacccttttctttttattaattaattttgagata
gtcttgtgtagtccaggctagctttaagcttgctatatagctgagagtgg
tcttaaactgttgatcctcctgtcccctacttataaacattgggagcttc
taattctttcatcagtcagtaggagatattactcatatttcgttggcact
tactacattgtgagtacacagtaaacattaatcgtgctaatccaagtgta
atttatcatttagaaagtaaagtgatttgagtttctgtctgataaatcct
atcatttcttctaagaattgtttgtcttaggttgatacatggtcacagcc
ccacaaatgagaatagatgagtatgaaacctcctgctttgacagtttaga
aataatgacacatttgtaaatgtgctgttgattctccaagttaattttta
attgtgataagaattaattaagtatgctaagaaatgctatcattttcatt
aatcatacaggaatgtatttattgagccagattttctaaactaaaaagta
ttaacagggagatataaaggttatacatgtttgttatattgaaataagta
cattagttgtatgtaatatattttggtatgttttttaatataatattttc
tcctttaacattttacctaaaagaagttgttggtgaggatccctttgtat
aattgtgaaaaaagtaacaaaaaattagtaatttaaattatttgatcctg
tgaaaatacttcatttgtataaatacacttctgatgagatttcgattttg
aagaaattgtggcatttttctctatatttcaaatcaacttgacaaagctc
ttacttattaacattttaatttagaaaatcccagcataatcttaatatta
aaatacgaaggaatgatagtagttttgattgtcattgtgaccctgttaag
cagtagctagagtataccaatttgtgtgctttatgcaattatgtttttct
tttaagaaattgctgaattacattacattttttttctccacctcacttta
tcttagcatagaagatgttgagtgctgcatgacacgaaaatgtcaccttc
attatgtgatggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141088873_141090088
seq2: B6Ng01-181M08.b_45_1242 (reverse)

seq1  GTAAATTT---AATGCAACTGACTGCCCATGGGGTCTTAGAATCCTTTAG  47
      ||||||||    |||| |||||||||||||  |||| ||||   | ||||
seq2  GTAAATTTTTATATGC-ACTGACTGCCCAT-TGGTC-TAGA--TCGTTAG  45

seq1  AAATCTATTTCTTGAAAGAAAAAAATAGAAGTTTCAGATCAGCGTTCAGC  97
      ||   |  ||||     ||  | | ||||   ||||||||||||||||||
seq2  AA---TCATTCT-----GAGCAGATTAGA--GTTCAGATCAGCGTTCAGC  85

seq1  TATTATTTTAAAAGTAATTTAGTAGTCTATTTGAAGGTTTTCATTTGCTT  147
      ||||||||||||||||  ||||||||||| |||||||||||||||||| |
seq2  TATTATTTTAAAAGTA--TTAGTAGTCTA-TTGAAGGTTTTCATTTGC-T  131

seq1  TATAAATTTATGCTCTC-TCATTGTTTATATTGGTATTGAAGTTGGAAAT  196
      |||||| |||||||||| |||||| |||||| |||| ||||| |||||||
seq2  TATAAA-TTATGCTCTCTTCATTG-TTATATGGGTA-TGAAG-TGGAAAT  177

seq1  TTGGCTAGCATTTACTTATGCCAATCT-GTGCATAATTTAAAAAGAGCGA  245
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTGGCTAGCATTTACTTATGCCAATCTGGTGCATAATTTAAAAAGAGCGA  227

seq1  GAACAGCCTTGCTATCTTGCCCTCTGACCCACTGCTTTACCTT-GGAAGT  294
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  GAACAGCCTTGCTATCTTG-CCTCTGACCCACTGCTTTACCTTGGGAAGT  276

seq1  TTATTTGACATGGCAGGTGGTGACAAAGAGCTGCTTCTGACATCTCTAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGACATGGCAGGTGGTGACAAAGAGCTGCTTCTGACATCTCTAGC  326

seq1  AATGTAATCTCACTTCTCAGCTACAAATGCTTCTGAGGAACAGAAAGCTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATCTCACTTCTCAGCTACAAATGCTTCTGAGGAACAGAAAGCTG  376

seq1  GTATGATGTGGAAAGCAGAAAGAGAATGAATCTCATTCAGATGTGGGATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATGTGGAAAGCAGAAAGAGAATGAATCTCATTCAGATGTGGGATG  426

seq1  ATAAAAATGGCTTCTCTAAATATGTCCAAGAAATTAGACCTCTGAGGAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGGCTTCTCTAAATATGTCCAAGAAATTAGACCTCTGAGGAGA  476

seq1  AACTGGCAGAGTTACAAGTGGCAAAGATGAAACAGAACAAATCTATCCCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCAGAGTTACAAGTGGCAAAGATGAAACAGAACAAATCTATCCCC  526

seq1  CCTGTAGAATTATATTTTGTTGTTGTCCTTTGTCAAAGAAAATTAAGAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGAATTATATTTTGTTGTTGTCCTTTGTCAAAGAAAATTAAGAAG  576

seq1  CATGGAAGCAGTCCCATTACTGTGCCACCCTGTGCTACTGTGCTTAACTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGCAGTCCCATTACTGTGCCACCCTGTGCTACTGTGCTTAACTA  626

seq1  ATTTGAACTCTAGCGTTAATTGAAAAACTTCCTAGAAAAGTTAATTGAGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTCTAGCGTTAATTGAAAAACTTCCTAGAAAAGTTAATTGAGA  676

seq1  GTGACAGTAGTTAGTTGTGAAGGAAGACCAAACCATATTAATTGTACATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTAGTTAGTTGTGAAGGAAGACCAAACCATATTAATTGTACATT  726

seq1  ATAGTTAGATAAGGGCTAAGCTTTTTAGCTTCTGGACTTTAAACATGAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAGATAAGGGCTAAGCTTTTTAGCTTCTGGACTTTAAACATGAAT  776

seq1  GACTTGCTTTTTAGTCATAAATTTTTAGCAAGAGACAGTTATTAGAGGGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCTTTTTAGTCATAAATTTTTAGCAAGAGACAGTTATTAGAGGGT  826

seq1  AAAGATAACATCCCGTTTAGTGTGAGGAAAAGTGGAAATGTCTGCACTGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAACATCCCGTTTAGTGTGAGGAAAAGTGGAAATGTCTGCACTGT  876

seq1  ATTGTTGGACCAATGGCATTTGCTCCTGTTAGTACAGTGACTGAGAAGTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGACCAATGGCATTTGCTCCTGTTAGTACAGTGACTGAGAAGTG  926

seq1  CGAGTGAGTGAGGTATGGTATGCACACGATCAGTGTACACATATGTGCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGAGTGAGGTATGGTATGCACACGATCAGTGTACACATATGTGCAT  976

seq1  TCTACCAGAGTGCCTACTATTTGTAAGTATTTTTCCTTAACCTGATCTAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAGAGTGCCTACTATTTGTAAGTATTTTTCCTTAACCTGATCTAT  1026

seq1  TTTTCTTAGACTTTTGCTTATCTTTCATATAAGCAGTAGCAGTCACAAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGACTTTTGCTTATCTTTCATATAAGCAGTAGCAGTCACAAAT  1076

seq1  TAATCAGTTTGATATAAATTTATATTTTGTTATGTAATAAAATATATGAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTTTGATATAAATTTATATTTTGTTATGTAATAAAATATATGAT  1126

seq1  CATGGAAAATCTATTTTTTAAAGAAATGTGAAAAATACCCCATATTACTC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAATCTATTTTTTAAAGAAATGTGAAAAATACCCCATATTACTC  1176

seq1  AAAAATACACAGTTTGGAATTC  1216
      ||||||||||||||||||||||
seq2  AAAAATACACAGTTTGGAATTC  1198


seq1: chr2_140962761_140963881
seq2: B6Ng01-181M08.g_65_1179

seq1  GAATTCTTTTAAAATTGACCCTTTTCTTTTTATTAATTAATTTTGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAAATTGACCCTTTTCTTTTTATTAATTAATTTTGAGATA  50

seq1  GTCTTGTGTAGTCCAGGCTAGCTTTAAGCTTGCTATATAGCTGAGAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGTAGTCCAGGCTAGCTTTAAGCTTGCTATATAGCTGAGAGTGG  100

seq1  TCTTAAACTGTTGATCCTCCTGTCCCCTACTTATAAACATTGGGAGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAACTGTTGATCCTCCTGTCCCCTACTTATAAACATTGGGAGCTTC  150

seq1  TAATTCTTTCATCAGTCAGTAGGAGATATTACTCATATTTCGTTGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTTCATCAGTCAGTAGGAGATATTACTCATATTTCGTTGGCACT  200

seq1  TACTACATTGTGAGTACACAGTAAACATTAATCGTGCTAATCCAAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACATTGTGAGTACACAGTAAACATTAATCGTGCTAATCCAAGTGTA  250

seq1  ATTTATCATTTAGAAAGTAAAGTGATTTGAGTTTCTGTCTGATAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCATTTAGAAAGTAAAGTGATTTGAGTTTCTGTCTGATAAATCCT  300

seq1  ATCATTTCTTCTAAGAATTGTTTGTCTTAGGTTGATACATGGTCACAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTTCTAAGAATTGTTTGTCTTAGGTTGATACATGGTCACAGCC  350

seq1  CCACAAATGAGAATAGATGAGTATGAAACCTCCTGCTTTGACAGTTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATGAGAATAGATGAGTATGAAACCTCCTGCTTTGACAGTTTAGA  400

seq1  AATAATGACACATTTGTAAATGTGCTGTTGATTCTCCAAGTTAATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGACACATTTGTAAATGTGCTGTTGATTCTCCAAGTTAATTTTTA  450

seq1  ATTGTGATAAGAATTAATTAAGTATGCTAAGAAATGCTATCATTTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATAAGAATTAATTAAGTATGCTAAGAAATGCTATCATTTTCATT  500

seq1  AATCATACAGGAATGTATTTATTGAGCCAGATTTTCTAAACTAAAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATACAGGAATGTATTTATTGAGCCAGATTTTCTAAACTAAAAAGTA  550

seq1  TTAACAGGGAGATATAAAGGTTATACATGTTTGTTATATTGAAATAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGGGAGATATAAAGGTTATACATGTTTGTTATATTGAAATAAGTA  600

seq1  CATTAGTTGTATGTAATATATTTTGGTATGTTTTTTAATATAATATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTTGTATGTAATATATTTTGGTATGTTTTTTAATATAATATTTTC  650

seq1  TCCTTTAACATTTTACCTAAAAGAAGTTGTTGGTGAGGATCCCTTTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAACATTTTACCTAAAAGAAGTTGTTGGTGAGGATCCCTTTGTAT  700

seq1  AATTGTGAAAAAAGTAACAAAAAATTAGTAATTTAAATTATTTGATCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGAAAAAAGTAACAAAAAATTAGTAATTTAAATTATTTGATCCTG  750

seq1  TGAAAATACTTCATTTGTATAAATACACTTCTGATGAGATTTCGATTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATACTTCATTTGTATAAATACACTTCTGATGAGATTTCGATTTTG  800

seq1  AAGAAATTGTGGCATTTTTCTCTATATTTCAAATCAACTTGACAAAGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTGTGGCATTTTTCTCTATATTTCAAATCAACTTGACAAAGCTC  850

seq1  TTACTTATTAACATTTTAATTTAGAAAATCCCAGCATAATCTTAATATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTAACATTTTAATTTAGAAAATCCCAGCATAATCTTAATATTA  900

seq1  AAATACGAAGGAATGATAGTAGTTTTGATTGTCATTGTGACCCTGTTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACGAAGGAATGATAGTAGTTTTGATTGTCATTGTGACCCTGTTAAG  950

seq1  CAGTAGCTAGAGTATACCAATTTGTGTGCTTTATGCAAATTATG-TTTTC  999
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  CAGTAGCTAGAGTATACCAATTTGTGTGCTTTATGC-AATTATGTTTTTC  999

seq1  TTTTAAGAAATTGCTTGAAATTACATTACATTTTTTTTCCTCCACTCAAC  1049
      |||||||||||||||   |||||||||||||||||||| ||||||   ||
seq2  TTTTAAGAAATTGCT--GAATTACATTACATTTTTTTT-CTCCACCTCAC  1046

seq1  TTTAATCTTAGCATAGAAGATGTTGAGTGCTGCATTGACAACGAAAATGT  1099
      ||| |||||||||||||||||||||||||||||| |||| ||||||||||
seq2  TTT-ATCTTAGCATAGAAGATGTTGAGTGCTGCA-TGAC-ACGAAAATGT  1093

seq1  CACCTTCATTATGTGATTGTGC  1121
      ||||||||||||||||| ||||
seq2  CACCTTCATTATGTGATGGTGC  1115


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