BAC Information

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BAC

Clone NameB6Ng01-181P06
Chromosome2 (Build37)
Map Location 17,971,317 - 18,132,610
singlet/doubletdoublet
Overlap geneMllt10, LOC641254
Upstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik
Downstream geneDnajc1, LOC100041388, LOC623325, LOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181P06.bB6Ng01-181P06.g
ACCGA007977GA007978
length8491,087
definitionB6Ng01-181P06.b B6Ng01-181P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,131,763 - 18,132,610)(17,971,317 - 17,972,388)
sequence
gaattccatttcagtgcaacaaagcaacaagaaaatcagagccttacaag
ggagtgtgtggcatcctcccctgtgtgttcccgcctccattcttcatagc
tgtggcagacactgcagcagccagtgaagcacagaacagcaggaaaggcg
agttctggccattttcaagtgtcaacttttctcttgagctacaggcccag
ttttatcactaagtctctgcagttcaaaacagaaataagaagcattaatt
agttcaaccaatgttggccaagatgagacagtaccctctgagactgtcgc
tggttcaatgtggtacaagtgatttctcctcaagtcagctagtcttcccc
agagtgaccatggatttatttatatcaccacactgcgcacatggaaaggc
accaaggtggcgagcccatccttggacacaattctaaggatgtagcatca
cctttcctgatccacctttccataggaggagcaaaggagggcaaatactg
agttttaatgaactaggaaaaagccatagttgaccccatagtcgtatatg
ttcttgacctctcttagctcttgcctattgtaagtgggttcccacctaca
agaactgaaatcacatatgacattgtacctggcagggactccttaacttc
cctcccaaccagcttacagttggttttgatgtttgtcttgagattaggtc
tcagcaaggtgtggtaagtgcctgtttttaatcccaaaagaacggatcag
agataaacaggtcctatgagctcaaggccagccttgtctacatactgagt
tcctgtacagccaggactatacagagtccttgtcttgggggaggggggc
gaattccagggagcagatacttccttctgcagcaaagggaaggaaaggga
cggctccccaaggtgatcccagaagttttacataaaaacaatgaaaagaa
agtgctgctctatggcgcagcggaccatttcagtggttggtgatggtttg
actggagggttagaggactcttccacggctcccatgtttcccctgtgaaa
gccagacatttgtcttaagaaaaatcactttggatgaagatcagtctgct
ttaacctcttcttagtcactagcatggtttgctgtcgttttcaaggatat
ccaaaatattgccaagtgagaggaagggtctttccacttgcatttgtagg
atctcagatgggtggttggctgctttgcaaaattcagcaaaatcttctgc
atttgtaactccagcataaatgcagcccaggcacctacatgtttcctcct
tctcccaaaatagacacatctgtgaggttaaagagtgaacggatatttct
gaacctgtaagaaaaaaaaagcacaataatttctttcttcatattcaaaa
gttccagtttcccctgctgtgatctggccagcaggagcaggtatgactaa
aaaaaagaaaaggaaaagaaaaaaagaaaaaaagtcttaagaaaaacaaa
caaataaacaaacagaaatcagacatacaaaaaggtagttagcttgacaa
gatgaagtctctcggccatggctccccacccccaccctcatcttccttgt
aattttcccagggaattttgaagagattgggaattttaagaagtacatcc
ggaaatttaaggaagtctattttaagagggtctgtaactcaggaggttgg
ggatttgaaaagtcagccctggactactgtagcttcctcaaccacagatg
gtaatccgccgctcttcacttattcaatggtgtgtccaaaccgcgaatgt
cctagtcctggtcttgaatcaaaggttagcatttccatccaagaaatcag
agcctacagatattacattttttgttcccttgattgagggaaggaccaat
gcatgtggatctcgttgaatttctcaggctctaaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_18131763_18132610
seq2: B6Ng01-181P06.b_45_893 (reverse)

seq1  GCCCCCCT-CCCCAAGACAAGGACTCTGTATAGTCCTGGCTGTACAGGAA  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCTCCCCCAAGACAAGGACTCTGTATAGTCCTGGCTGTACAGGAA  50

seq1  CTCAGTATGTAGACAAGGCTGGCCTTGAGCTCATAGGACCTGTTTATCTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATGTAGACAAGGCTGGCCTTGAGCTCATAGGACCTGTTTATCTC  100

seq1  TGATCCGTTCTTTTGGGATTAAAAACAGGCACTTACCACACCTTGCTGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCGTTCTTTTGGGATTAAAAACAGGCACTTACCACACCTTGCTGAG  150

seq1  ACCTAATCTCAAGACAAACATCAAAACCAACTGTAAGCTGGTTGGGAGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATCTCAAGACAAACATCAAAACCAACTGTAAGCTGGTTGGGAGGG  200

seq1  AAGTTAAGGAGTCCCTGCCAGGTACAATGTCATATGTGATTTCAGTTCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGGAGTCCCTGCCAGGTACAATGTCATATGTGATTTCAGTTCTT  250

seq1  GTAGGTGGGAACCCACTTACAATAGGCAAGAGCTAAGAGAGGTCAAGAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGGAACCCACTTACAATAGGCAAGAGCTAAGAGAGGTCAAGAAC  300

seq1  ATATACGACTATGGGGTCAACTATGGCTTTTTCCTAGTTCATTAAAACTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACGACTATGGGGTCAACTATGGCTTTTTCCTAGTTCATTAAAACTC  350

seq1  AGTATTTGCCCTCCTTTGCTCCTCCTATGGAAAGGTGGATCAGGAAAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGCCCTCCTTTGCTCCTCCTATGGAAAGGTGGATCAGGAAAGGT  400

seq1  GATGCTACATCCTTAGAATTGTGTCCAAGGATGGGCTCGCCACCTTGGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTACATCCTTAGAATTGTGTCCAAGGATGGGCTCGCCACCTTGGTG  450

seq1  CCTTTCCATGTGCGCAGTGTGGTGATATAAATAAATCCATGGTCACTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCATGTGCGCAGTGTGGTGATATAAATAAATCCATGGTCACTCTG  500

seq1  GGGAAGACTAGCTGACTTGAGGAGAAATCACTTGTACCACATTGAACCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGACTAGCTGACTTGAGGAGAAATCACTTGTACCACATTGAACCAG  550

seq1  CGACAGTCTCAGAGGGTACTGTCTCATCTTGGCCAACATTGGTTGAACTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAGTCTCAGAGGGTACTGTCTCATCTTGGCCAACATTGGTTGAACTA  600

seq1  ATTAATGCTTCTTATTTCTGTTTTGAACTGCAGAGACTTAGTGATAAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCTTCTTATTTCTGTTTTGAACTGCAGAGACTTAGTGATAAAAC  650

seq1  TGGGCCTGTAGCTCAAGAGAAAAGTTGACACTTGAAAATGGCCAGAACTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGTAGCTCAAGAGAAAAGTTGACACTTGAAAATGGCCAGAACTC  700

seq1  GCCTTTCCTGCTGTTCTGTGCTTCACTGGCTGCTGCAGTGTCTGCCACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCTGCTGTTCTGTGCTTCACTGGCTGCTGCAGTGTCTGCCACAG  750

seq1  CTATGAAGAATGGAGGCGGGAACACACAGGGGAGGATGCCACACACTCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGAATGGAGGCGGGAACACACAGGGGAGGATGCCACACACTCCC  800

seq1  TTGTAAGGCTCTGATTTTCTTGTTGCTTTGTTGCACTGAAATGGAATTC  848
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGCTCTGATTTTCTTGTTGCTTTGTTGCACTGAAATGGAATTC  849

seq1: chr2_17971317_17972388
seq2: B6Ng01-181P06.g_67_1153

seq1  GAATTCCAGGGAGCAGATACTTCCTTCTGCAGCAAAGGGAAGGAAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGAGCAGATACTTCCTTCTGCAGCAAAGGGAAGGAAAGGGA  50

seq1  CGGCTCCCCAAGGTGATCCCAGAAGTTTTACATAAAAACAATGAAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCCCCAAGGTGATCCCAGAAGTTTTACATAAAAACAATGAAAAGAA  100

seq1  AGTGCTGCTCTATGGCGCAGCGGACCATTTCAGTGGTTGGTGATGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGCTCTATGGCGCAGCGGACCATTTCAGTGGTTGGTGATGGTTTG  150

seq1  ACTGGAGGGTTAGAGGACTCTTCCACGGCTCCCATGTTTCCCCTGTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGGTTAGAGGACTCTTCCACGGCTCCCATGTTTCCCCTGTGAAA  200

seq1  GCCAGACATTTGTCTTAAGAAAAATCACTTTGGATGAAGATCAGTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACATTTGTCTTAAGAAAAATCACTTTGGATGAAGATCAGTCTGCT  250

seq1  TTAACCTCTTCTTAGTCACTAGCATGGTTTGCTGTCGTTTTCAAGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTCTTCTTAGTCACTAGCATGGTTTGCTGTCGTTTTCAAGGATAT  300

seq1  CCAAAATATTGCCAAGTGAGAGGAAGGGTCTTTCCACTTGCATTTGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATTGCCAAGTGAGAGGAAGGGTCTTTCCACTTGCATTTGTAGG  350

seq1  ATCTCAGATGGGTGGTTGGCTGCTTTGCAAAATTCAGCAAAATCTTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGATGGGTGGTTGGCTGCTTTGCAAAATTCAGCAAAATCTTCTGC  400

seq1  ATTTGTAACTCCAGCATAAATGCAGCCCAGGCACCTACATGTTTCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAACTCCAGCATAAATGCAGCCCAGGCACCTACATGTTTCCTCCT  450

seq1  TCTCCCAAAATAGACACATCTGTGAGGTTAAAGAGTGAACGGATATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAAATAGACACATCTGTGAGGTTAAAGAGTGAACGGATATTTCT  500

seq1  GAACCTGTAAGAAAAAAAAAGCACAATAATTTCTTTCTTCATATTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGTAAGAAAAAAAAAGCACAATAATTTCTTTCTTCATATTCAAAA  550

seq1  GTTCCAGTTTCCCCTGCTGTGATCTGGCCAGCAGGAGCAGGTATGACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGTTTCCCCTGCTGTGATCTGGCCAGCAGGAGCAGGTATGACTAA  600

seq1  AAAAAAGAAAAGGAAAAGAAAAAAAGAAAAAAAGTCTTAAGAAAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAGGAAAAGAAAAAAAGAAAAAAAGTCTTAAGAAAAACAAA  650

seq1  CAAATAAACAAACAGAAATCAGACATACAAAAAGGTAGTTAGCTTGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAACAAACAGAAATCAGACATACAAAAAGGTAGTTAGCTTGACAA  700

seq1  GATGAAGTCTCTCGGCCATGGCTCCCCACCCCCACCCTCATCTTCCTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGTCTCTCGGCCATGGCTCCCCACCCCCACCCTCATCTTCCTTGT  750

seq1  AATTTTCCCA-GGAATTTTGAAGAGATTGGGAATTTTAAGAAGTACATCC  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCCAGGGAATTTTGAAGAGATTGGGAATTTTAAGAAGTACATCC  800

seq1  GGAAA-TTAAGGAAGTCTA-TTTAAGAGGGTCTGTAACTCAGGAGGTT-G  846
      ||||| ||||||||||||| |||||||||||||||||||||||||||| |
seq2  GGAAATTTAAGGAAGTCTATTTTAAGAGGGTCTGTAACTCAGGAGGTTGG  850

seq1  GGATTTGAAAAGTCAGCCCTGGACTACTGTAGCT--CTC-AGCACAGAT-  892
      ||||||||||||||||||||||||||||||||||  ||| | ||||||| 
seq2  GGATTTGAAAAGTCAGCCCTGGACTACTGTAGCTTCCTCAACCACAGATG  900

seq1  GTAAT-CGCCGCTCTTCAACTTAATCAAT-GTGTGTACAAACCGCG-ATG  939
      ||||| ||||||||||| ||||| ||||| |||||| ||||||||| |||
seq2  GTAATCCGCCGCTCTTC-ACTTATTCAATGGTGTGTCCAAACCGCGAATG  949

seq1  T-CTAGTTCTTGCCTTTGAAATCTAAGGCTAGCATTTCCATCCAAGAAAT  988
      | ||||| || | |||   |||| |||| |||||||||||||||||||||
seq2  TCCTAGTCCTGGTCTT--GAATCAAAGGTTAGCATTTCCATCCAAGAAAT  997

seq1  CAGAG-CTACAGTAAATTACATTTTT--GTCCCTTGAATGAGGGAAGGAC  1035
      ||||| |||||| | |||||||||||   |||||||| ||||||||||||
seq2  CAGAGCCTACAG-ATATTACATTTTTTGTTCCCTTGATTGAGGGAAGGAC  1046

seq1  CATTGAA--TGGATCTCGT--GATATTTCAGGCTTTAAACG  1072
      || || |  ||||||||||   || | ||||||| ||||||
seq2  CAATGCATGTGGATCTCGTTGAATTTCTCAGGCTCTAAACG  1087